Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110680031

Identifier: 110680031

GI number: 110680031

Start: 2695033

End: 2695782

Strand: Direct

Name: 110680031

Synonym: RD1_2824

Alternate gene names: NA

Gene position: 2695033-2695782 (Clockwise)

Preceding gene: 110680030

Following gene: 110680035

Centisome position: 65.21

GC content: 56.8

Gene sequence:

>750_bases
ATGCTGAAAAAACTACTGATGGCTTGTACCCTGAGCCTGATGAGTGCAACCGCTCCGGCGATGGCGCTCGACCTGAATGC
CATGTCAGATGAAGAACGCGCACAGTTCGGCGAACAGGTGCGCGCCTATCTGATGGAAAATCCGCAGGTGATCATGGAGG
CCGTCAACGCATTGGAAGAACGGCAAGCCGCAGCGCAGGCGCAGGCTGATGTCGATCTGGTCCGCCAGAATGCCGAAGCG
ATTTTCAACGACGGGTTTTCCTATGTCGGCGGCAATCCGCAGGGTGATGTGACCCTCGTGGAGTTCATGGATTATCGTTG
CGGCTTTTGCAAACGTGCCTTTGGCGAGGTGGAAAAACTGCTCGCTGCGGATGGCAACATTCGCTTTGTCGTCAAGGAGT
TCCCGATCCTCGGAGAACAGTCCCTGATTGCGTCCCGATTTGCCATTGCCACCAAACTGGAGGAAGGCCGCGACGCTTAC
AAACAGATGCATGATGCCCTGATGTCCTACAACGGCGACATCACCATCACGGCCCTGAGGCGCCTTGCGGATACCTTCGG
CCTGAACGCGGATCAGATCGAAGCGCGTATGGATGCCGACGAGGTCACCCAAGAACTGATGGAAACGCGCGCGCTCGCGC
AGCGGCTGCAGATCAGCGGCACACCGACTTTCGTGCTCGAAGATGAGATGTTGCGTGGGTTCCTGCCGATGGACCAGCTG
CAAATGATCGTTGAAGAAAAACGCGGTTGA

Upstream 100 bases:

>100_bases
CAAACGGGCCGTCGATCTGTTGCCGGAAGGGTCCGGCCCTTGGCAACGGGCACAAGATGTGTTGATTGCATCCGAACGCG
CCGCAAAACGGAGATAGACT

Downstream 100 bases:

>100_bases
TCGACCGCGTTATTCGGCCGCATCCGCATGGGCTGCCGCAGCCTCAAGCTCGGCGGCCTTTTTTTCGACCTGCTCCACGA
TATGCTCGATCATCTGGTCA

Product: outer membrane protein, putative

Products: NA

Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; DSBA-Like Thioredoxin Domain Protein; ThiolDisulfide Interchange Protein DsbA; Protein-Disulfide Isomerase; Twin-Arginine Translocation Pathway Signal; DSBA-Like Thioredoxin Domain-Containing Protein; Disulfide Oxidoreductase; 27kDa Outer Membrane Protein; DsbA Oxidoreductase; Thioredoxin Domain Protein; 27 KDa Outer Membrane Protein; Metal Resistance Protein; Disulfide Bond Formation Protein D; Secreted Protein Suppressor For Copper-Sensitivity C; DsbA-Like Disulfide Oxidoreductase; Thioredoxin Domain-Containing Protein; Dsba Oxidoreductase Family Protein; Secreted Protein Suppressor For Copper-Sensitivity ScsC; ThiolDisulfide Oxidoreductase; Suppressor For Copper-Sensitivity C; Oxidoreductase; Disulfide Bonded Thioredoxin Protein; DSBA Family Oxidoreductase; BcfH Protein; Dsba-Like Thioredoxin Domain Protein; Copper-Sensitivity Suppressor C Protein; Secreted Copper-Sensitivity Suppressor C; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MLKKLLMACTLSLMSATAPAMALDLNAMSDEERAQFGEQVRAYLMENPQVIMEAVNALEERQAAAQAQADVDLVRQNAEA
IFNDGFSYVGGNPQGDVTLVEFMDYRCGFCKRAFGEVEKLLAADGNIRFVVKEFPILGEQSLIASRFAIATKLEEGRDAY
KQMHDALMSYNGDITITALRRLADTFGLNADQIEARMDADEVTQELMETRALAQRLQISGTPTFVLEDEMLRGFLPMDQL
QMIVEEKRG

Sequences:

>Translated_249_residues
MLKKLLMACTLSLMSATAPAMALDLNAMSDEERAQFGEQVRAYLMENPQVIMEAVNALEERQAAAQAQADVDLVRQNAEA
IFNDGFSYVGGNPQGDVTLVEFMDYRCGFCKRAFGEVEKLLAADGNIRFVVKEFPILGEQSLIASRFAIATKLEEGRDAY
KQMHDALMSYNGDITITALRRLADTFGLNADQIEARMDADEVTQELMETRALAQRLQISGTPTFVLEDEMLRGFLPMDQL
QMIVEEKRG
>Mature_249_residues
MLKKLLMACTLSLMSATAPAMALDLNAMSDEERAQFGEQVRAYLMENPQVIMEAVNALEERQAAAQAQADVDLVRQNAEA
IFNDGFSYVGGNPQGDVTLVEFMDYRCGFCKRAFGEVEKLLAADGNIRFVVKEFPILGEQSLIASRFAIATKLEEGRDAY
KQMHDALMSYNGDITITALRRLADTFGLNADQIEARMDADEVTQELMETRALAQRLQISGTPTFVLEDEMLRGFLPMDQL
QMIVEEKRG

Specific function: Unknown

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27752; Mature: 27752

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLLMACTLSLMSATAPAMALDLNAMSDEERAQFGEQVRAYLMENPQVIMEAVNALEE
CHHHHHHHHHHHHHHHCCCHHHEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RQAAAQAQADVDLVRQNAEAIFNDGFSYVGGNPQGDVTLVEFMDYRCGFCKRAFGEVEKL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAADGNIRFVVKEFPILGEQSLIASRFAIATKLEEGRDAYKQMHDALMSYNGDITITALR
HHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RLADTFGLNADQIEARMDADEVTQELMETRALAQRLQISGTPTFVLEDEMLRGFLPMDQL
HHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHCCCCHHHH
QMIVEEKRG
HHHHHHCCC
>Mature Secondary Structure
MLKKLLMACTLSLMSATAPAMALDLNAMSDEERAQFGEQVRAYLMENPQVIMEAVNALEE
CHHHHHHHHHHHHHHHCCCHHHEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RQAAAQAQADVDLVRQNAEAIFNDGFSYVGGNPQGDVTLVEFMDYRCGFCKRAFGEVEKL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAADGNIRFVVKEFPILGEQSLIASRFAIATKLEEGRDAYKQMHDALMSYNGDITITALR
HHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RLADTFGLNADQIEARMDADEVTQELMETRALAQRLQISGTPTFVLEDEMLRGFLPMDQL
HHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHCCCCHHHH
QMIVEEKRG
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA