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The map label for this gene is 110679949

Identifier: 110679949

GI number: 110679949

Start: 2607300

End: 2608016

Strand: Direct

Name: 110679949

Synonym: RD1_2735

Alternate gene names: NA

Gene position: 2607300-2608016 (Clockwise)

Preceding gene: 110679948

Following gene: 110679953

Centisome position: 63.08

GC content: 58.02

Gene sequence:

>717_bases
ATGAACACGCCCTTCGACCCTGATATGCCACCACCGCGTCGCGGTATTCTTGCCCGGATGCGTTCCAATTTCCTGACCGG
ACTTGTTGTCATTGCGCCGGTAGGGCTGACCATCTGGCTCATCTGGTCGGTCGTCGGCTGGATTGACGGCTTCGTTCTGC
CGCTGGTGCCCAACAGCTACCAGCCAGACCGCGTGCTGCAGGATTTGCTGGGCCTTGACCCTTCGGTGCAGATTGACGTG
CGCGGCATCGGCGTTGTGATCTTTTTGCTGTTCACGATGATCGTGGGCTGGATGGCCAAAGGGCTGATCGGGCGCTCGCT
GATCTCTTTTGCCGAAGGTCTGGTGGAGCGCACCCCCGTCGTGCGTTCCATCTATTCCGGCATCAAACAGATATCCGAGA
CCGTTTTCGCACAGTCCGAACGCTCCTTCGAGAAGGCATGCCTGATCGAATACCCGCGCAAGGGCATCTGGGCGATCGGT
TTTATCTCGACCAATACCAAGGGCGAGATCGCCGTGCGGGCAAATGACGGGCAGCCAATGCTGAGCATCTTTCTCCCCAC
GACACCGAATCCGACATCGGGGTTTTTGCTCTTTGTGCCGGAAACCGATGTCATCAAGTTGGATATGACGGTCGAAGAAG
CCGCCAAACTGGTGATTTCCGCCGGTCTGGTCTATCCCAACGGCAAGGATGAGCAAAGGCCTGCCGGGCAGGCGTAA

Upstream 100 bases:

>100_bases
CCGCATTGCGGGAAAGTGAGCCATTGCGCGGGCAGCCCCCATTGTTAACCGCTGCCAAACCCCCTAACTATCGCGAGTGC
CTTGCAAAGACGGACACTGA

Downstream 100 bases:

>100_bases
TTACTGGAACATCTCGACCATATCGACGGAACTGCGCTTGTTGAGATCATCGCGATGCACGCTCAGAAAATCATCCGCGG
CCCGCTGTCCGGCCTCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNTPFDPDMPPPRRGILARMRSNFLTGLVVIAPVGLTIWLIWSVVGWIDGFVLPLVPNSYQPDRVLQDLLGLDPSVQIDV
RGIGVVIFLLFTMIVGWMAKGLIGRSLISFAEGLVERTPVVRSIYSGIKQISETVFAQSERSFEKACLIEYPRKGIWAIG
FISTNTKGEIAVRANDGQPMLSIFLPTTPNPTSGFLLFVPETDVIKLDMTVEEAAKLVISAGLVYPNGKDEQRPAGQA

Sequences:

>Translated_238_residues
MNTPFDPDMPPPRRGILARMRSNFLTGLVVIAPVGLTIWLIWSVVGWIDGFVLPLVPNSYQPDRVLQDLLGLDPSVQIDV
RGIGVVIFLLFTMIVGWMAKGLIGRSLISFAEGLVERTPVVRSIYSGIKQISETVFAQSERSFEKACLIEYPRKGIWAIG
FISTNTKGEIAVRANDGQPMLSIFLPTTPNPTSGFLLFVPETDVIKLDMTVEEAAKLVISAGLVYPNGKDEQRPAGQA
>Mature_238_residues
MNTPFDPDMPPPRRGILARMRSNFLTGLVVIAPVGLTIWLIWSVVGWIDGFVLPLVPNSYQPDRVLQDLLGLDPSVQIDV
RGIGVVIFLLFTMIVGWMAKGLIGRSLISFAEGLVERTPVVRSIYSGIKQISETVFAQSERSFEKACLIEYPRKGIWAIG
FISTNTKGEIAVRANDGQPMLSIFLPTTPNPTSGFLLFVPETDVIKLDMTVEEAAKLVISAGLVYPNGKDEQRPAGQA

Specific function: Unknown

COG id: COG2928

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26100; Mature: 26100

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPFDPDMPPPRRGILARMRSNFLTGLVVIAPVGLTIWLIWSVVGWIDGFVLPLVPNSY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC
QPDRVLQDLLGLDPSVQIDVRGIGVVIFLLFTMIVGWMAKGLIGRSLISFAEGLVERTPV
CHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRSIYSGIKQISETVFAQSERSFEKACLIEYPRKGIWAIGFISTNTKGEIAVRANDGQPM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEECCCCEE
LSIFLPTTPNPTSGFLLFVPETDVIKLDMTVEEAAKLVISAGLVYPNGKDEQRPAGQA
EEEEECCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHCEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNTPFDPDMPPPRRGILARMRSNFLTGLVVIAPVGLTIWLIWSVVGWIDGFVLPLVPNSY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC
QPDRVLQDLLGLDPSVQIDVRGIGVVIFLLFTMIVGWMAKGLIGRSLISFAEGLVERTPV
CHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRSIYSGIKQISETVFAQSERSFEKACLIEYPRKGIWAIGFISTNTKGEIAVRANDGQPM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEECCCCEE
LSIFLPTTPNPTSGFLLFVPETDVIKLDMTVEEAAKLVISAGLVYPNGKDEQRPAGQA
EEEEECCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA