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The map label for this gene is 110679907

Identifier: 110679907

GI number: 110679907

Start: 2559207

End: 2561657

Strand: Direct

Name: 110679907

Synonym: RD1_2685

Alternate gene names: NA

Gene position: 2559207-2561657 (Clockwise)

Preceding gene: 110679906

Following gene: 110679908

Centisome position: 61.92

GC content: 58.55

Gene sequence:

>2451_bases
ATGGTTATCAACCGGCAACGCACGAAATTGGTGCGCGATATTGACGAGTTTCGACGGGATGCCTTTCAGGACAAGCTGAG
CCTGGATCGACCCGGCGGCAGCATGCCAGCCGCGTGGTTTCTTGGCCCAAAAGCGGAGAACGAAAAGTTTCTGCGCGACA
TGATCACACTGGCCATTGATGAGGCGGTCAAGGCGCGTCATGATTTTCACCCTGATGATCCCTCGACGCCATCGCTGGCG
GAGCTTGAGGAGGATGGGTACAACACCGGGCGCGATCTGTTCGAAAGCCGGTTTCGGGAAGTCCTCGGTTTTCTCAGGGG
GTCGGTCCCCATGGCGAGCTACCGCAACCAGAGCCATATGTACTGGGACACCACGCTGCCCAGTGTCGTCGGTTACTTCG
CAACGATGCTCTACAACCAGAACAACTGCACCCCCGAAGCCTCGCCGATCACCACGGCACTTGAAATGGCCGTCGGGGAT
GACCTGTGTCGGATGCTCGGCTATGAGATCCCGGATCGCGAAGACGTCCGACATGGCGCAATCCGCCCCTGGGGGCACAT
CACCTGCGATGGCAGTGTCGCAAACATCGAAAGCATGTGGGCCGCGCGCAACATCAAGTATCTGCCCGTGGGACTGGCGG
CAGCGATTCGGCATGATCCGGACATGGCCGATGCCCGCGATGTCACGGTGAGCACCTTGCAAGGCAAACGCCGCCGCCTT
CTTGATCTGGACAACTGGAGCCTTCTGAACCTGCCGATTGATCAGGCCATCAAACTGCCCGCGCGCATCTCAAAGACCGC
AGGCATTCCCGAGGATGTGCTGAAAGCTGCCCTTGCCGCCTATTCGGTTCAGGACCTCGGCCTGCTCGAATTTCACCGCC
AGTTTCTGCCCGATACCCCTGCCCCGGTCGTCATGGCCCCGGCGACAGCGCATTATTCATGGTCCAAGGCCGTGTCGCTG
CTGGGTCTGGGCCGCGCCGCCTTGCATGGTATCCGGGTGGATCTTGATGCAAGGACCGATCCGGTTCATCTGCGCCGCAT
GCTGGAGGATTGCCTCAAGGAAGGTCGCCCCGTCGTGCAGGTGGTCGCGGTCGTTGGCAGTACCGAGGAAAGCGCCGTCG
ATCCGCTGCATGAAATTGTCAAAATCAGAAACGAATTCCGCGAACGCGGCCTTGAATTTGCGCTGCACGCAGATGGGGCA
TGGGGCGGGTACTTCGCCTCCATGCTGCGCCAATCCAATCTTGATCGCCAGTATGATGCCGCAGAAACCGAGGAAGAACG
CGAGGAAGTCGAACGGCTCATCATCAAGACCTACGGTGTGGACAACCCGGAAATCGACCCGGATGTACCGGCCCTCAGGG
ATTGGGAATCCAAAGCGATCTTTAATCGGCGCAATACGATGTTCGCACCGGGCATTGACCTGAACGAATACGTGCGCCGA
CAGTACCACGCGCTGCAACACTGCGACACGATCACGGTGGATCCGCACAAGGGCGGGTTTGTGGTCTACCCTGCGGGCGC
CTTGTGTTACCGCAATGGCGCGCTGCGCCAGCTTATCGCCTTTGCCTCGCCCGTGGTACAGCATGGCGATATCGCGCAAT
CCGTCGGGTTTTATGGGGTGGAAGGGTCAAAACCGGGTGCTGCAGCCACGGCGGTCTACCTGTCGCACAGCCTGATCCCG
GCAGATCGATACGGCTATGGTGCCTTGCTGGGCAAATGCATGTTTGCCAGCAAACGGTTCTATGCAGGGTTGGTCAGCAT
GGCCCGGGAGGATGATCCGTTTTACGTGACAACCTTCCAGCGACTTCCGGCCGAACGGGTGGGCGCGCCCAGAAGTGCGG
TGCGCCGCCAGATTGATCTGATCCGCAATGAAATCGTCAAACCCATCACCGATGATGAGTTGCTCACGGCCCTGAGCAAG
GATTTCGAATTGCGCGAACTGTTTTCCGAGATGGGATCAGATCAGTGTATCGTGGCCTATTCGTTCAATTATCTCAATGG
CTTCGCGCAAAACCGGAAAATCTCCCGGCTCAACGAGATGAACGAACGGATGTTTGAAGCCATGAGCATCCAGAAGTTCA
ACGACGGGGCCGTTCCGGATGTCGACCTTCTGGTGACGGCATCCAGTTTCGATCCGGAGGTTTATGGGCAGGACTTCGTT
GATTCCTATGCGCGCCGGATCGGGGTGAACCCGGAACCAGGCGTGGGCATCAAATTCCTCATTTCAACGCAACAGAACCC
GTGGCTGACGCGGGCGGACGATGGAAAGCTGTTGCCAAGACTGATCGAGGTTCTGCGCGATGTTGCGACCGAAGCCGCCG
AATATGTGATGGCACAGCACAAGGACGATTACGGTCAGGAGTTTTACCATACCGGTGTGTCAGGATATCAGGGACCGGAT
TTACCCCATCCGGACGCCGCCCCTGCCCCAAGTGCCACGCGCAAACCTTGA

Upstream 100 bases:

>100_bases
TTGTATTTTTCTAGGGAATTGAGCGTTTTTCATCTATCATAGGCAGAATAAGCGATTTGAGCACAACTGATTTTTCTAAA
AGAACCTCGGGGGAGGGACA

Downstream 100 bases:

>100_bases
GGATCCCGCAGAATGTCAGATCACAGCCATCATCACGCCGCAGCCCCCACCTCTGCGCTGGAACCGCAGCTTGCCACGGT
CGTCCATAACCCACCGCATC

Product: tyrosine decarboxylase, putative

Products: NA

Alternate protein names: Group II Decarboxylase Family Protein; Pyridoxal-Dependent Decarboxylase; Decarboxylase; Peptidase; Glutamate Decarboxylase; Glutamate Decarboxylase-Like PLP-Dependent Protein

Number of amino acids: Translated: 816; Mature: 816

Protein sequence:

>816_residues
MVINRQRTKLVRDIDEFRRDAFQDKLSLDRPGGSMPAAWFLGPKAENEKFLRDMITLAIDEAVKARHDFHPDDPSTPSLA
ELEEDGYNTGRDLFESRFREVLGFLRGSVPMASYRNQSHMYWDTTLPSVVGYFATMLYNQNNCTPEASPITTALEMAVGD
DLCRMLGYEIPDREDVRHGAIRPWGHITCDGSVANIESMWAARNIKYLPVGLAAAIRHDPDMADARDVTVSTLQGKRRRL
LDLDNWSLLNLPIDQAIKLPARISKTAGIPEDVLKAALAAYSVQDLGLLEFHRQFLPDTPAPVVMAPATAHYSWSKAVSL
LGLGRAALHGIRVDLDARTDPVHLRRMLEDCLKEGRPVVQVVAVVGSTEESAVDPLHEIVKIRNEFRERGLEFALHADGA
WGGYFASMLRQSNLDRQYDAAETEEEREEVERLIIKTYGVDNPEIDPDVPALRDWESKAIFNRRNTMFAPGIDLNEYVRR
QYHALQHCDTITVDPHKGGFVVYPAGALCYRNGALRQLIAFASPVVQHGDIAQSVGFYGVEGSKPGAAATAVYLSHSLIP
ADRYGYGALLGKCMFASKRFYAGLVSMAREDDPFYVTTFQRLPAERVGAPRSAVRRQIDLIRNEIVKPITDDELLTALSK
DFELRELFSEMGSDQCIVAYSFNYLNGFAQNRKISRLNEMNERMFEAMSIQKFNDGAVPDVDLLVTASSFDPEVYGQDFV
DSYARRIGVNPEPGVGIKFLISTQQNPWLTRADDGKLLPRLIEVLRDVATEAAEYVMAQHKDDYGQEFYHTGVSGYQGPD
LPHPDAAPAPSATRKP

Sequences:

>Translated_816_residues
MVINRQRTKLVRDIDEFRRDAFQDKLSLDRPGGSMPAAWFLGPKAENEKFLRDMITLAIDEAVKARHDFHPDDPSTPSLA
ELEEDGYNTGRDLFESRFREVLGFLRGSVPMASYRNQSHMYWDTTLPSVVGYFATMLYNQNNCTPEASPITTALEMAVGD
DLCRMLGYEIPDREDVRHGAIRPWGHITCDGSVANIESMWAARNIKYLPVGLAAAIRHDPDMADARDVTVSTLQGKRRRL
LDLDNWSLLNLPIDQAIKLPARISKTAGIPEDVLKAALAAYSVQDLGLLEFHRQFLPDTPAPVVMAPATAHYSWSKAVSL
LGLGRAALHGIRVDLDARTDPVHLRRMLEDCLKEGRPVVQVVAVVGSTEESAVDPLHEIVKIRNEFRERGLEFALHADGA
WGGYFASMLRQSNLDRQYDAAETEEEREEVERLIIKTYGVDNPEIDPDVPALRDWESKAIFNRRNTMFAPGIDLNEYVRR
QYHALQHCDTITVDPHKGGFVVYPAGALCYRNGALRQLIAFASPVVQHGDIAQSVGFYGVEGSKPGAAATAVYLSHSLIP
ADRYGYGALLGKCMFASKRFYAGLVSMAREDDPFYVTTFQRLPAERVGAPRSAVRRQIDLIRNEIVKPITDDELLTALSK
DFELRELFSEMGSDQCIVAYSFNYLNGFAQNRKISRLNEMNERMFEAMSIQKFNDGAVPDVDLLVTASSFDPEVYGQDFV
DSYARRIGVNPEPGVGIKFLISTQQNPWLTRADDGKLLPRLIEVLRDVATEAAEYVMAQHKDDYGQEFYHTGVSGYQGPD
LPHPDAAPAPSATRKP
>Mature_816_residues
MVINRQRTKLVRDIDEFRRDAFQDKLSLDRPGGSMPAAWFLGPKAENEKFLRDMITLAIDEAVKARHDFHPDDPSTPSLA
ELEEDGYNTGRDLFESRFREVLGFLRGSVPMASYRNQSHMYWDTTLPSVVGYFATMLYNQNNCTPEASPITTALEMAVGD
DLCRMLGYEIPDREDVRHGAIRPWGHITCDGSVANIESMWAARNIKYLPVGLAAAIRHDPDMADARDVTVSTLQGKRRRL
LDLDNWSLLNLPIDQAIKLPARISKTAGIPEDVLKAALAAYSVQDLGLLEFHRQFLPDTPAPVVMAPATAHYSWSKAVSL
LGLGRAALHGIRVDLDARTDPVHLRRMLEDCLKEGRPVVQVVAVVGSTEESAVDPLHEIVKIRNEFRERGLEFALHADGA
WGGYFASMLRQSNLDRQYDAAETEEEREEVERLIIKTYGVDNPEIDPDVPALRDWESKAIFNRRNTMFAPGIDLNEYVRR
QYHALQHCDTITVDPHKGGFVVYPAGALCYRNGALRQLIAFASPVVQHGDIAQSVGFYGVEGSKPGAAATAVYLSHSLIP
ADRYGYGALLGKCMFASKRFYAGLVSMAREDDPFYVTTFQRLPAERVGAPRSAVRRQIDLIRNEIVKPITDDELLTALSK
DFELRELFSEMGSDQCIVAYSFNYLNGFAQNRKISRLNEMNERMFEAMSIQKFNDGAVPDVDLLVTASSFDPEVYGQDFV
DSYARRIGVNPEPGVGIKFLISTQQNPWLTRADDGKLLPRLIEVLRDVATEAAEYVMAQHKDDYGQEFYHTGVSGYQGPD
LPHPDAAPAPSATRKP

Specific function: Unknown

COG id: COG0076

COG function: function code E; Glutamate decarboxylase and related PLP-dependent proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91278; Mature: 91278

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVINRQRTKLVRDIDEFRRDAFQDKLSLDRPGGSMPAAWFLGPKAENEKFLRDMITLAID
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
EAVKARHDFHPDDPSTPSLAELEEDGYNTGRDLFESRFREVLGFLRGSVPMASYRNQSHM
HHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCE
YWDTTLPSVVGYFATMLYNQNNCTPEASPITTALEMAVGDDLCRMLGYEIPDREDVRHGA
EECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
IRPWGHITCDGSVANIESMWAARNIKYLPVGLAAAIRHDPDMADARDVTVSTLQGKRRRL
CCCCCCEEECCCHHHHHHHHHHCCCEEECHHHHHHHHCCCCCCCCCCCHHHHHHCHHHHH
LDLDNWSLLNLPIDQAIKLPARISKTAGIPEDVLKAALAAYSVQDLGLLEFHRQFLPDTP
CCCCCCEEECCCHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
APVVMAPATAHYSWSKAVSLLGLGRAALHGIRVDLDARTDPVHLRRMLEDCLKEGRPVVQ
CCEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCHHEE
VVAVVGSTEESAVDPLHEIVKIRNEFRERGLEFALHADGAWGGYFASMLRQSNLDRQYDA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCC
AETEEEREEVERLIIKTYGVDNPEIDPDVPALRDWESKAIFNRRNTMFAPGIDLNEYVRR
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHCCCCEECCCCCHHHHHHH
QYHALQHCDTITVDPHKGGFVVYPAGALCYRNGALRQLIAFASPVVQHGDIAQSVGFYGV
HHHHHHHCCCEEECCCCCCEEEECCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCC
EGSKPGAAATAVYLSHSLIPADRYGYGALLGKCMFASKRFYAGLVSMAREDDPFYVTTFQ
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
RLPAERVGAPRSAVRRQIDLIRNEIVKPITDDELLTALSKDFELRELFSEMGSDQCIVAY
HCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCEEEEE
SFNYLNGFAQNRKISRLNEMNERMFEAMSIQKFNDGAVPDVDLLVTASSFDPEVYGQDFV
EHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHH
DSYARRIGVNPEPGVGIKFLISTQQNPWLTRADDGKLLPRLIEVLRDVATEAAEYVMAQH
HHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC
KDDYGQEFYHTGVSGYQGPDLPHPDAAPAPSATRKP
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVINRQRTKLVRDIDEFRRDAFQDKLSLDRPGGSMPAAWFLGPKAENEKFLRDMITLAID
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
EAVKARHDFHPDDPSTPSLAELEEDGYNTGRDLFESRFREVLGFLRGSVPMASYRNQSHM
HHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCE
YWDTTLPSVVGYFATMLYNQNNCTPEASPITTALEMAVGDDLCRMLGYEIPDREDVRHGA
EECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
IRPWGHITCDGSVANIESMWAARNIKYLPVGLAAAIRHDPDMADARDVTVSTLQGKRRRL
CCCCCCEEECCCHHHHHHHHHHCCCEEECHHHHHHHHCCCCCCCCCCCHHHHHHCHHHHH
LDLDNWSLLNLPIDQAIKLPARISKTAGIPEDVLKAALAAYSVQDLGLLEFHRQFLPDTP
CCCCCCEEECCCHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
APVVMAPATAHYSWSKAVSLLGLGRAALHGIRVDLDARTDPVHLRRMLEDCLKEGRPVVQ
CCEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCHHEE
VVAVVGSTEESAVDPLHEIVKIRNEFRERGLEFALHADGAWGGYFASMLRQSNLDRQYDA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCC
AETEEEREEVERLIIKTYGVDNPEIDPDVPALRDWESKAIFNRRNTMFAPGIDLNEYVRR
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHCCCCEECCCCCHHHHHHH
QYHALQHCDTITVDPHKGGFVVYPAGALCYRNGALRQLIAFASPVVQHGDIAQSVGFYGV
HHHHHHHCCCEEECCCCCCEEEECCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCC
EGSKPGAAATAVYLSHSLIPADRYGYGALLGKCMFASKRFYAGLVSMAREDDPFYVTTFQ
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
RLPAERVGAPRSAVRRQIDLIRNEIVKPITDDELLTALSKDFELRELFSEMGSDQCIVAY
HCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCEEEEE
SFNYLNGFAQNRKISRLNEMNERMFEAMSIQKFNDGAVPDVDLLVTASSFDPEVYGQDFV
EHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHH
DSYARRIGVNPEPGVGIKFLISTQQNPWLTRADDGKLLPRLIEVLRDVATEAAEYVMAQH
HHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC
KDDYGQEFYHTGVSGYQGPDLPHPDAAPAPSATRKP
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA