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The map label for this gene is 110679908

Identifier: 110679908

GI number: 110679908

Start: 2561670

End: 2562596

Strand: Direct

Name: 110679908

Synonym: RD1_2686

Alternate gene names: NA

Gene position: 2561670-2562596 (Clockwise)

Preceding gene: 110679907

Following gene: 110679909

Centisome position: 61.98

GC content: 59.87

Gene sequence:

>927_bases
ATGTCAGATCACAGCCATCATCACGCCGCAGCCCCCACCTCTGCGCTGGAACCGCAGCTTGCCACGGTCGTCCATAACCC
ACCGCATCTGCACGCCTTTTCACTGATCGGGGACAAACATGTCTTTGCGGTGCATATGACCCAGTATCACCATGAGGTGC
ACAAGTATCAGATCGCCTATCAGGTCCATCTGCCCGAAGCCGTCTTGCAGGAATACAGGCAGGTGCGCCGCCACAATCCC
GGTGATTTCATCGTGATGTGCAACCACGCCGAAGACCCCTTTATCATCCCTGCAATACCGGCGGGAGAAAAGCCGACCTT
TCGGGCCAATATCTTTCAGGGCATGCCGTCCTTTCCCCCCGAATACCTTGATGATCCACATTTTTTTCCGTGGGACCCGC
TGAAGGTCGTGCTGCCCATTGCCGGGGATTTCACGGCGACGGTGGGGCGCATGGTCATGTTCCGCCCCTTTGCCCACCAT
TATCAGCAGCCTGAGGTTGCGACCTATCTGCTGTTTGGTGACGGGGGCGAGGCGCATATGACCAACCTGCAGACCGCGAG
CCTTGCCAGCGGACCGTTTGAGCCGGATGCCTTTGGCCCCGATTATGACCACCAGCTGACCCTCAAGGCGGCACCGGACT
GGCTGGATCCGACCTTGCTGAAGGCCGGGGTCGTGGTCACGGTGCCGTCGGTTCGCTTGCGGGACGCGGCGGGCCATCCG
ACGATACCCTGCGCCAGCCCATTTGCAAATGGCGAGACAATCGAGGTGCTGTATCGCGGCATGGGCCCCGCGCGCAAGGT
CACTGTGGCGCACACCGTGCTCTGCGCAACCGGGGTTTCAAACAGCGAGGCCGTGATGCCCTGCTCCGAAGCCGAGTCGA
TGAACATTTCTGCAACGCCCGATCGTTTCCTCCTTGCAAATCAATAG

Upstream 100 bases:

>100_bases
TTACCATACCGGTGTGTCAGGATATCAGGGACCGGATTTACCCCATCCGGACGCCGCCCCTGCCCCAAGTGCCACGCGCA
AACCTTGAGGATCCCGCAGA

Downstream 100 bases:

>100_bases
GGCCATATCTGCCATGAAACACGACTATCAACGACAAGATGGCAATGAAGAGGTCTGGAAACTTGTTCTGATCGAAGGCC
ACCCGCTGTTGCTGTCCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSDHSHHHAAAPTSALEPQLATVVHNPPHLHAFSLIGDKHVFAVHMTQYHHEVHKYQIAYQVHLPEAVLQEYRQVRRHNP
GDFIVMCNHAEDPFIIPAIPAGEKPTFRANIFQGMPSFPPEYLDDPHFFPWDPLKVVLPIAGDFTATVGRMVMFRPFAHH
YQQPEVATYLLFGDGGEAHMTNLQTASLASGPFEPDAFGPDYDHQLTLKAAPDWLDPTLLKAGVVVTVPSVRLRDAAGHP
TIPCASPFANGETIEVLYRGMGPARKVTVAHTVLCATGVSNSEAVMPCSEAESMNISATPDRFLLANQ

Sequences:

>Translated_308_residues
MSDHSHHHAAAPTSALEPQLATVVHNPPHLHAFSLIGDKHVFAVHMTQYHHEVHKYQIAYQVHLPEAVLQEYRQVRRHNP
GDFIVMCNHAEDPFIIPAIPAGEKPTFRANIFQGMPSFPPEYLDDPHFFPWDPLKVVLPIAGDFTATVGRMVMFRPFAHH
YQQPEVATYLLFGDGGEAHMTNLQTASLASGPFEPDAFGPDYDHQLTLKAAPDWLDPTLLKAGVVVTVPSVRLRDAAGHP
TIPCASPFANGETIEVLYRGMGPARKVTVAHTVLCATGVSNSEAVMPCSEAESMNISATPDRFLLANQ
>Mature_307_residues
SDHSHHHAAAPTSALEPQLATVVHNPPHLHAFSLIGDKHVFAVHMTQYHHEVHKYQIAYQVHLPEAVLQEYRQVRRHNPG
DFIVMCNHAEDPFIIPAIPAGEKPTFRANIFQGMPSFPPEYLDDPHFFPWDPLKVVLPIAGDFTATVGRMVMFRPFAHHY
QQPEVATYLLFGDGGEAHMTNLQTASLASGPFEPDAFGPDYDHQLTLKAAPDWLDPTLLKAGVVVTVPSVRLRDAAGHPT
IPCASPFANGETIEVLYRGMGPARKVTVAHTVLCATGVSNSEAVMPCSEAESMNISATPDRFLLANQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33894; Mature: 33763

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00187 TPP_ENZYMES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDHSHHHAAAPTSALEPQLATVVHNPPHLHAFSLIGDKHVFAVHMTQYHHEVHKYQIAY
CCCCCCCCCCCCCHHCCCCHHEEECCCCCEEEEEEECCCEEEEEEHHHHHHHHHEEEEEE
QVHLPEAVLQEYRQVRRHNPGDFIVMCNHAEDPFIIPAIPAGEKPTFRANIFQGMPSFPP
EEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEHHHHCCCCCCCH
EYLDDPHFFPWDPLKVVLPIAGDFTATVGRMVMFRPFAHHYQQPEVATYLLFGDGGEAHM
HHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHCCCCCEEEEEEEECCCCCEE
TNLQTASLASGPFEPDAFGPDYDHQLTLKAAPDWLDPTLLKAGVVVTVPSVRLRDAAGHP
ECCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCEEEEECCEEEECCCCCC
TIPCASPFANGETIEVLYRGMGPARKVTVAHTVLCATGVSNSEAVMPCSEAESMNISATP
CCCCCCCCCCCCEEEEEEECCCCCCEEEHHEEEEEECCCCCCCEEECCCCCCCCEEECCC
DRFLLANQ
CCEEEECC
>Mature Secondary Structure 
SDHSHHHAAAPTSALEPQLATVVHNPPHLHAFSLIGDKHVFAVHMTQYHHEVHKYQIAY
CCCCCCCCCCCCHHCCCCHHEEECCCCCEEEEEEECCCEEEEEEHHHHHHHHHEEEEEE
QVHLPEAVLQEYRQVRRHNPGDFIVMCNHAEDPFIIPAIPAGEKPTFRANIFQGMPSFPP
EEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEHHHHCCCCCCCH
EYLDDPHFFPWDPLKVVLPIAGDFTATVGRMVMFRPFAHHYQQPEVATYLLFGDGGEAHM
HHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHCCCCCEEEEEEEECCCCCEE
TNLQTASLASGPFEPDAFGPDYDHQLTLKAAPDWLDPTLLKAGVVVTVPSVRLRDAAGHP
ECCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCEEEEECCEEEECCCCCC
TIPCASPFANGETIEVLYRGMGPARKVTVAHTVLCATGVSNSEAVMPCSEAESMNISATP
CCCCCCCCCCCCEEEEEEECCCCCCEEEHHEEEEEECCCCCCCEEECCCCCCCCEEECCC
DRFLLANQ
CCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA