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The map label for this gene is 110679880

Identifier: 110679880

GI number: 110679880

Start: 2533255

End: 2533842

Strand: Direct

Name: 110679880

Synonym: RD1_2654

Alternate gene names: NA

Gene position: 2533255-2533842 (Clockwise)

Preceding gene: 110679877

Following gene: 110679883

Centisome position: 61.29

GC content: 59.01

Gene sequence:

>588_bases
ATGAAACACGATCTGATTGCAGCCGCAGTATCATTTGCAGTGCTCAGTCCAGTTGCGGCCGTTGCACAGGCCCTCACGCT
GGCACCTGCGGACCCGCAACCAAACGCAAGCGCGCTGGCGCCGGGCCTTGCGGTCAAATACGCCACGATTCCGGGAAATG
TGCGCTCGGTCGAACTGGCGCGCAAATCGCTGGACCGGCGCGCCGAAGCGGGGCCGCCCATTGCCGGGTTGTCCTTTGAG
GATACCAATGAAGGCGACCGGGTTTTGACTTCTGAACGCGCTGAACAGGTCGCGGCGGATATCTCCGGTTTCATCAAGTT
CGATGCAGCAGGCAGCTACACCTTCGATTTCCTCAGCAATGACGGGTTGCAGATCGCAATCGGCGGTCAGGAAGTCGGGT
TTTACGACGGTGTCCACCCTTGTGGTTATGTCGGTGAGATCGAGGTCGAGGTGCCGCAGGCGGGTTATTACGCAGTGGAA
GCCACCTATTTTCAGCGCAAGGGCACCGCCTGCCTGATGATGGAAATCGGACCGGACAGCGATGGGCTGGAACTGGCGTC
GGATGACATTTTCTTTCATCAGCCCTGA

Upstream 100 bases:

>100_bases
GCCCCCCTTTCACCTTTGGGAGGCCTTGCATGCCCTAAGTGCCGCGCCCTAGACTGCGGGCAAGGGACCGGAACAGGTCA
CATCAATCTTGGGAGAATTC

Downstream 100 bases:

>100_bases
CGCGAAATCAGGCGGTGTGCCCGCTGCGCACCGCCGTCTCGGCCATCTGCGCGAGCGTTTTACGATCCGCACAGGCCGCC
ACCGCCAAGGGGGTGTGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKHDLIAAAVSFAVLSPVAAVAQALTLAPADPQPNASALAPGLAVKYATIPGNVRSVELARKSLDRRAEAGPPIAGLSFE
DTNEGDRVLTSERAEQVAADISGFIKFDAAGSYTFDFLSNDGLQIAIGGQEVGFYDGVHPCGYVGEIEVEVPQAGYYAVE
ATYFQRKGTACLMMEIGPDSDGLELASDDIFFHQP

Sequences:

>Translated_195_residues
MKHDLIAAAVSFAVLSPVAAVAQALTLAPADPQPNASALAPGLAVKYATIPGNVRSVELARKSLDRRAEAGPPIAGLSFE
DTNEGDRVLTSERAEQVAADISGFIKFDAAGSYTFDFLSNDGLQIAIGGQEVGFYDGVHPCGYVGEIEVEVPQAGYYAVE
ATYFQRKGTACLMMEIGPDSDGLELASDDIFFHQP
>Mature_195_residues
MKHDLIAAAVSFAVLSPVAAVAQALTLAPADPQPNASALAPGLAVKYATIPGNVRSVELARKSLDRRAEAGPPIAGLSFE
DTNEGDRVLTSERAEQVAADISGFIKFDAAGSYTFDFLSNDGLQIAIGGQEVGFYDGVHPCGYVGEIEVEVPQAGYYAVE
ATYFQRKGTACLMMEIGPDSDGLELASDDIFFHQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20542; Mature: 20542

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHDLIAAAVSFAVLSPVAAVAQALTLAPADPQPNASALAPGLAVKYATIPGNVRSVELA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHH
RKSLDRRAEAGPPIAGLSFEDTNEGDRVLTSERAEQVAADISGFIKFDAAGSYTFDFLSN
HHHHHHHHHCCCCEECCCCCCCCCCCEEHHHHHHHHHHHHHHHEEEECCCCCEEEEEECC
DGLQIAIGGQEVGFYDGVHPCGYVGEIEVEVPQAGYYAVEATYFQRKGTACLMMEIGPDS
CCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCC
DGLELASDDIFFHQP
CCCEECCCCEEEECC
>Mature Secondary Structure
MKHDLIAAAVSFAVLSPVAAVAQALTLAPADPQPNASALAPGLAVKYATIPGNVRSVELA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHH
RKSLDRRAEAGPPIAGLSFEDTNEGDRVLTSERAEQVAADISGFIKFDAAGSYTFDFLSN
HHHHHHHHHCCCCEECCCCCCCCCCCEEHHHHHHHHHHHHHHHEEEECCCCCEEEEEECC
DGLQIAIGGQEVGFYDGVHPCGYVGEIEVEVPQAGYYAVEATYFQRKGTACLMMEIGPDS
CCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCC
DGLELASDDIFFHQP
CCCEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA