| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is aroQ [H]
Identifier: 110679877
GI number: 110679877
Start: 2530718
End: 2531155
Strand: Direct
Name: aroQ [H]
Synonym: RD1_2651
Alternate gene names: 110679877
Gene position: 2530718-2531155 (Clockwise)
Preceding gene: 110679876
Following gene: 110679880
Centisome position: 61.23
GC content: 49.54
Gene sequence:
>438_bases ATGGTTTCAGTTCTCATTCTCAACGGTCCAAACCTCAATCTGCTGGGAAGCCGTCAGCCTGAGGTTTATGGCAAAACCAC TTTGGCTGATATTGAAGGTATGTGCCGGGCGCATGGGCAAAATACTGATCTTGAAGTAACTTTCAGTCAGTCCAATCATG AGGGTGCGCTGATTGACGCAATTCATGCCGCGCGTGGTACGCATGCAGGTATCATCCTGAATGCAGGCGCGTATACGCAT ACTTCTATTGCCTTGATGGATGCGATCGCCTCAGTTGAACTGCCCTCCATCGAGCTGCATCTCAGCAATGTGCATGCCCG CGAGGAGTTTCGCCATACATCCTATATCGCCAAAGTATGTATTGGTGTGATCTGCGGCTTTGGCGCACAAGGGTATCTGT TGGCGATGGACGCAATGAAAGCTCACTTAAAGCTTTAA
Upstream 100 bases:
>100_bases TCGCAGTGTCAAAATGATGACGCACGCCCCTGCGTCGTTGCTGGACAGGGTGTTTGGGACCTGTCACTTCACGTCCTATA CAGCAAGCGAGCGAGATATC
Downstream 100 bases:
>100_bases GTGTTGATCTCTAGTGTCTGACTTTAAACAAAAAAGGACGCCCCGTCAGGAGCGTCCTTCCGCGCATTCTTGCGAAGACC CTAGCCTTTGACCGCTTTGG
Product: 3-dehydroquinate dehydratase
Products: NA
Alternate protein names: 3-dehydroquinase; Type II DHQase [H]
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MVSVLILNGPNLNLLGSRQPEVYGKTTLADIEGMCRAHGQNTDLEVTFSQSNHEGALIDAIHAARGTHAGIILNAGAYTH TSIALMDAIASVELPSIELHLSNVHAREEFRHTSYIAKVCIGVICGFGAQGYLLAMDAMKAHLKL
Sequences:
>Translated_145_residues MVSVLILNGPNLNLLGSRQPEVYGKTTLADIEGMCRAHGQNTDLEVTFSQSNHEGALIDAIHAARGTHAGIILNAGAYTH TSIALMDAIASVELPSIELHLSNVHAREEFRHTSYIAKVCIGVICGFGAQGYLLAMDAMKAHLKL >Mature_145_residues MVSVLILNGPNLNLLGSRQPEVYGKTTLADIEGMCRAHGQNTDLEVTFSQSNHEGALIDAIHAARGTHAGIILNAGAYTH TSIALMDAIASVELPSIELHLSNVHAREEFRHTSYIAKVCIGVICGFGAQGYLLAMDAMKAHLKL
Specific function: Catalyzes a trans-dehydration via an enolate intermediate [H]
COG id: COG0757
COG function: function code E; 3-dehydroquinate dehydratase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-II 3-dehydroquinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001874 - InterPro: IPR018509 - ProDom: PD004527 [H]
Pfam domain/function: PF01220 DHquinase_II [H]
EC number: =4.2.1.10 [H]
Molecular weight: Translated: 15505; Mature: 15505
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS01029 DEHYDROQUINASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSVLILNGPNLNLLGSRQPEVYGKTTLADIEGMCRAHGQNTDLEVTFSQSNHEGALIDA CEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHH IHAARGTHAGIILNAGAYTHTSIALMDAIASVELPSIELHLSNVHAREEFRHTSYIAKVC HHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH IGVICGFGAQGYLLAMDAMKAHLKL HHHHHCCCCCCEEEEHHHHHHHCCC >Mature Secondary Structure MVSVLILNGPNLNLLGSRQPEVYGKTTLADIEGMCRAHGQNTDLEVTFSQSNHEGALIDA CEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHH IHAARGTHAGIILNAGAYTHTSIALMDAIASVELPSIELHLSNVHAREEFRHTSYIAKVC HHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH IGVICGFGAQGYLLAMDAMKAHLKL HHHHHCCCCCCEEEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA