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The map label for this gene is 110679840

Identifier: 110679840

GI number: 110679840

Start: 2494596

End: 2495015

Strand: Direct

Name: 110679840

Synonym: RD1_2611

Alternate gene names: NA

Gene position: 2494596-2495015 (Clockwise)

Preceding gene: 110679836

Following gene: 110679843

Centisome position: 60.36

GC content: 56.67

Gene sequence:

>420_bases
ATGACACTGAAGATGGACATCAAGACGCTCAGCGAATTTGTGGAGCAGGTTTTTGAGCAGGTCAAAGGTGATTTCACGGT
CGAAGACCTGAGCGAAGACAGCCTGCGGGTCAGATTGAACGTGACTGACAAGCACCTTCGCCCCGGCGGCACGGTATCTG
GACCGTCGATGTTTGCGCTGGCCGATATGGCCGCATACTATATGACCCTCGCGCGTATCGGGCCCGAGGCTCTGACGGTT
ACAACGAATTGCGCCATTGATTTCATGCGCAAACCGGCGGCTGGCGCTGATCTTATTGCCCATGCGCGGCTTTTGAAACT
TGGTCGACAGCTTGCGGTCACGGATGTGTTGCTGTTTTCGGACGGGCAGCCGAAACCCGTGGCGCGCGCAAGCCTGACCT
ATTCCATCCCGCCGCAATAA

Upstream 100 bases:

>100_bases
AACGCCCGGCTTTTCGCGCGCAAATTTGTGGTCCTTGATGAGGTGTGACCTTGCGCCCCGTCCCAAATCAATCAATGAAG
AGAGCAGGGAGGGCAGGCGC

Downstream 100 bases:

>100_bases
AACTGCATGAGCGGATGGCCTGATCGCGGGTTTGCACGCGCCGGTTCACGCTCGCGATCTTGCTGTTATCATCCGCTGCG
TCAAATCTCTGCTCAGAGAA

Product: thioesterase family protein

Products: NA

Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Domain Protein; Thioesterase Superfamily; Thioesterase Protein; Thioesterase; Phenylacetic Acid Degradation-Like Protein; PaaI Thioesterase Family Protein

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTLKMDIKTLSEFVEQVFEQVKGDFTVEDLSEDSLRVRLNVTDKHLRPGGTVSGPSMFALADMAAYYMTLARIGPEALTV
TTNCAIDFMRKPAAGADLIAHARLLKLGRQLAVTDVLLFSDGQPKPVARASLTYSIPPQ

Sequences:

>Translated_139_residues
MTLKMDIKTLSEFVEQVFEQVKGDFTVEDLSEDSLRVRLNVTDKHLRPGGTVSGPSMFALADMAAYYMTLARIGPEALTV
TTNCAIDFMRKPAAGADLIAHARLLKLGRQLAVTDVLLFSDGQPKPVARASLTYSIPPQ
>Mature_138_residues
TLKMDIKTLSEFVEQVFEQVKGDFTVEDLSEDSLRVRLNVTDKHLRPGGTVSGPSMFALADMAAYYMTLARIGPEALTVT
TNCAIDFMRKPAAGADLIAHARLLKLGRQLAVTDVLLFSDGQPKPVARASLTYSIPPQ

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15185; Mature: 15054

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKMDIKTLSEFVEQVFEQVKGDFTVEDLSEDSLRVRLNVTDKHLRPGGTVSGPSMFAL
CEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHH
ADMAAYYMTLARIGPEALTVTTNCAIDFMRKPAAGADLIAHARLLKLGRQLAVTDVLLFS
HHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHEEEEEC
DGQPKPVARASLTYSIPPQ
CCCCCCCEEEEEEEECCCC
>Mature Secondary Structure 
TLKMDIKTLSEFVEQVFEQVKGDFTVEDLSEDSLRVRLNVTDKHLRPGGTVSGPSMFAL
EEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHH
ADMAAYYMTLARIGPEALTVTTNCAIDFMRKPAAGADLIAHARLLKLGRQLAVTDVLLFS
HHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHEEEEEC
DGQPKPVARASLTYSIPPQ
CCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA