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The map label for this gene is 110679843

Identifier: 110679843

GI number: 110679843

Start: 2496716

End: 2498182

Strand: Direct

Name: 110679843

Synonym: RD1_2614

Alternate gene names: NA

Gene position: 2496716-2498182 (Clockwise)

Preceding gene: 110679840

Following gene: 110679844

Centisome position: 60.41

GC content: 54.12

Gene sequence:

>1467_bases
ATGCGAAATCTTCCAAAACATCGCAGTCCGTTCTCCTTGCGCGGCTTTTGTCGGCGGCTCATGGGGTTCAGGCGCGAAGA
AGATGGCGCAATGACGATTTTCGCCACGATGATGGTGCTCATGATGCTGTTGGTCTGCGGGATCGCGGTCGATTTGATGC
AAAATGAAATGATGCGCACGCGGGTGCAGAACACTCTGGACCGGGCAATTTTGGCGGCGTCTGACTTGGATCAACCCTTA
CCAGCGGATGAAGTTGTCGACGATTACTTTGCCAAGGCAGGCATGACCGAGTTTCTCGATGATGTTCAGATCACGCCCGG
GGCTCACCTTCCTACAACGAATTTCAGGGTCGTGCAGGCCGAGGCCCGCACGCGCACCCCGTCGATCTACATGGCGATGA
CGGGTGTGCGCTCACTACCGGTATATGTGGCTGGTACAGCAGAAGAAACCATTGAAAACACGGAAATATCTTTGGTTTTG
GATATTTCCGGCTCCATGCGCAACAATGGCAAGATCGGCAATCTGCGCACTGCCGCAAAAGACTTCATCGGGGCGGTTCT
TGAAGGCAATGCCGCCAATACCACCTCTTTGAACATCGTGCCATATGCAGGTCAGACGAATCCGGGACCGATCGTTTTTC
AACGGGCAGGCGGGCGGCCCTTCGCGACATTCATAGAAGATTCCGATGGGAACGAAATCCTCTACGGTCAGACGTTCGTC
GATGACGAGGGCAATTCAATCGATGTGCCTTATAACACGATGTCGTCCTGTCTTGACCTCACCAATGGCGATTTCGACAA
CATTGACCTGCCAAGCGGTGGGTATGATCAGACGCCATACTTCATGAACTGGCCCATTGATGCGCCGACCATGGATTGGG
GTTGGTGCCCGCAAAACAAATCCTCCATCCGCTATGCGCAAAACAACGCAGGCCAGTTACAGGATTTCATTGATGACATG
CGTCTGCATGACGGCACCGGAACACAATACGGCATGAAATACGGTGTCGCCTTGCTGAACCCGAGTTCGCGCGACACGTT
TGTTGCGCTCAACGCGGCCGGTCTGGTGCCGGATGGTTTCAAGGACCGGCCCGCCGATTTCGGCACGACCGACACGCGTA
AGTTCATTGTCCTGATGACTGACGGGCAGATTACCGATCAGTTCCGACCCGAGGATAAGAACGACCCCAAGAATGATGAA
ATTGCTTTGAACCAGCGCATCGGAGACCGCGATACCTATGCGACGCAAAGTACGAACGTCGCCAACTTTTATTCCATTTG
CAACAAGGCGAAGGCGGCAGGCATTACCGTTTACACAATCGCTTTTGAGGCACCGGCGAACGCGATCACCCAAATGCGCA
CCTGCGCGACATCGCCTGCCTTTTTCTACAAGGTCGAAGGCGTCGAGATCAAAACCGCCTTCAAGTCGATCGCACGCCAG
ATCAACGAGTTGAGGCTGACCCAGTGA

Upstream 100 bases:

>100_bases
GTCGCGACCCGTTTCGCGTTTTTGCCACATTCGTCTGGCAAACAAGACGGCGGAAGTGGCGAATCATGTGCGTTCGCCGG
GTTTGGATCGGTTGAATATC

Downstream 100 bases:

>100_bases
CCTTCTGTTTTCGCACATATCTGCGGCGATTTCGCCGTGAGGAAGATGGCCAGATTGCGGTTGAGTTTGTCATCCTTGTC
CCTTTGGTGTTCACGATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MRNLPKHRSPFSLRGFCRRLMGFRREEDGAMTIFATMMVLMMLLVCGIAVDLMQNEMMRTRVQNTLDRAILAASDLDQPL
PADEVVDDYFAKAGMTEFLDDVQITPGAHLPTTNFRVVQAEARTRTPSIYMAMTGVRSLPVYVAGTAEETIENTEISLVL
DISGSMRNNGKIGNLRTAAKDFIGAVLEGNAANTTSLNIVPYAGQTNPGPIVFQRAGGRPFATFIEDSDGNEILYGQTFV
DDEGNSIDVPYNTMSSCLDLTNGDFDNIDLPSGGYDQTPYFMNWPIDAPTMDWGWCPQNKSSIRYAQNNAGQLQDFIDDM
RLHDGTGTQYGMKYGVALLNPSSRDTFVALNAAGLVPDGFKDRPADFGTTDTRKFIVLMTDGQITDQFRPEDKNDPKNDE
IALNQRIGDRDTYATQSTNVANFYSICNKAKAAGITVYTIAFEAPANAITQMRTCATSPAFFYKVEGVEIKTAFKSIARQ
INELRLTQ

Sequences:

>Translated_488_residues
MRNLPKHRSPFSLRGFCRRLMGFRREEDGAMTIFATMMVLMMLLVCGIAVDLMQNEMMRTRVQNTLDRAILAASDLDQPL
PADEVVDDYFAKAGMTEFLDDVQITPGAHLPTTNFRVVQAEARTRTPSIYMAMTGVRSLPVYVAGTAEETIENTEISLVL
DISGSMRNNGKIGNLRTAAKDFIGAVLEGNAANTTSLNIVPYAGQTNPGPIVFQRAGGRPFATFIEDSDGNEILYGQTFV
DDEGNSIDVPYNTMSSCLDLTNGDFDNIDLPSGGYDQTPYFMNWPIDAPTMDWGWCPQNKSSIRYAQNNAGQLQDFIDDM
RLHDGTGTQYGMKYGVALLNPSSRDTFVALNAAGLVPDGFKDRPADFGTTDTRKFIVLMTDGQITDQFRPEDKNDPKNDE
IALNQRIGDRDTYATQSTNVANFYSICNKAKAAGITVYTIAFEAPANAITQMRTCATSPAFFYKVEGVEIKTAFKSIARQ
INELRLTQ
>Mature_488_residues
MRNLPKHRSPFSLRGFCRRLMGFRREEDGAMTIFATMMVLMMLLVCGIAVDLMQNEMMRTRVQNTLDRAILAASDLDQPL
PADEVVDDYFAKAGMTEFLDDVQITPGAHLPTTNFRVVQAEARTRTPSIYMAMTGVRSLPVYVAGTAEETIENTEISLVL
DISGSMRNNGKIGNLRTAAKDFIGAVLEGNAANTTSLNIVPYAGQTNPGPIVFQRAGGRPFATFIEDSDGNEILYGQTFV
DDEGNSIDVPYNTMSSCLDLTNGDFDNIDLPSGGYDQTPYFMNWPIDAPTMDWGWCPQNKSSIRYAQNNAGQLQDFIDDM
RLHDGTGTQYGMKYGVALLNPSSRDTFVALNAAGLVPDGFKDRPADFGTTDTRKFIVLMTDGQITDQFRPEDKNDPKNDE
IALNQRIGDRDTYATQSTNVANFYSICNKAKAAGITVYTIAFEAPANAITQMRTCATSPAFFYKVEGVEIKTAFKSIARQ
INELRLTQ

Specific function: Unknown

COG id: COG4961

COG function: function code U; Flp pilus assembly protein TadG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53904; Mature: 53904

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLPKHRSPFSLRGFCRRLMGFRREEDGAMTIFATMMVLMMLLVCGIAVDLMQNEMMRT
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVQNTLDRAILAASDLDQPLPADEVVDDYFAKAGMTEFLDDVQITPGAHLPTTNFRVVQA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCEECCCCCCCCCCEEEEEE
EARTRTPSIYMAMTGVRSLPVYVAGTAEETIENTEISLVLDISGSMRNNGKIGNLRTAAK
CCCCCCCEEEEEECCCCCCCEEEECCHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHH
DFIGAVLEGNAANTTSLNIVPYAGQTNPGPIVFQRAGGRPFATFIEDSDGNEILYGQTFV
HHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEEEE
DDEGNSIDVPYNTMSSCLDLTNGDFDNIDLPSGGYDQTPYFMNWPIDAPTMDWGWCPQNK
CCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
SSIRYAQNNAGQLQDFIDDMRLHDGTGTQYGMKYGVALLNPSSRDTFVALNAAGLVPDGF
CCEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHCCEEEECCCCCCEEEEEEECCCCCCCC
KDRPADFGTTDTRKFIVLMTDGQITDQFRPEDKNDPKNDEIALNQRIGDRDTYATQSTNV
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCH
ANFYSICNKAKAAGITVYTIAFEAPANAITQMRTCATSPAFFYKVEGVEIKTAFKSIARQ
HHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHCCCCEEEEEECCEEHHHHHHHHHHH
INELRLTQ
HHHHCCCC
>Mature Secondary Structure
MRNLPKHRSPFSLRGFCRRLMGFRREEDGAMTIFATMMVLMMLLVCGIAVDLMQNEMMRT
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVQNTLDRAILAASDLDQPLPADEVVDDYFAKAGMTEFLDDVQITPGAHLPTTNFRVVQA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCEECCCCCCCCCCEEEEEE
EARTRTPSIYMAMTGVRSLPVYVAGTAEETIENTEISLVLDISGSMRNNGKIGNLRTAAK
CCCCCCCEEEEEECCCCCCCEEEECCHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHH
DFIGAVLEGNAANTTSLNIVPYAGQTNPGPIVFQRAGGRPFATFIEDSDGNEILYGQTFV
HHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEEEE
DDEGNSIDVPYNTMSSCLDLTNGDFDNIDLPSGGYDQTPYFMNWPIDAPTMDWGWCPQNK
CCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
SSIRYAQNNAGQLQDFIDDMRLHDGTGTQYGMKYGVALLNPSSRDTFVALNAAGLVPDGF
CCEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHCCEEEECCCCCCEEEEEEECCCCCCCC
KDRPADFGTTDTRKFIVLMTDGQITDQFRPEDKNDPKNDEIALNQRIGDRDTYATQSTNV
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCH
ANFYSICNKAKAAGITVYTIAFEAPANAITQMRTCATSPAFFYKVEGVEIKTAFKSIARQ
HHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHCCCCEEEEEECCEEHHHHHHHHHHH
INELRLTQ
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA