| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679814
Identifier: 110679814
GI number: 110679814
Start: 2468784
End: 2468933
Strand: Direct
Name: 110679814
Synonym: RD1_2583
Alternate gene names: NA
Gene position: 2468784-2468933 (Clockwise)
Preceding gene: 110679809
Following gene: 110679816
Centisome position: 59.73
GC content: 50.0
Gene sequence:
>150_bases ATGAACGCCCCGAATTTCGCCAATCAGCGGCATGAAAGTTCTCTTTTTGAAAGTGCTGTGGCCGATTTCAAGGCATGTAA GCGGACCAATGCCGCATTTTTGAGCGAAACCACGTGCGTTGCCGTTTGGCATATTGACGTGTTGCGGTGA
Upstream 100 bases:
>100_bases GGAGAGCCGCCAGTCCTGCCCGGCCGACAGTTGTGCCAGCGTTTGAATTCTCAGATCAGCAATCATTCCTGATTTTCTCG CAAAAGTTGAATAGTGTCAA
Downstream 100 bases:
>100_bases TGGCGGCCTCGCGCGCGGCTTCCAGCGAAATCTGACCTTTGAGATGGGCGATCAACTCCGGTGCGCCGATGGCCCGATGC GCGGGCAGGGTGGGGTCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 49
Protein sequence:
>49_residues MNAPNFANQRHESSLFESAVADFKACKRTNAAFLSETTCVAVWHIDVLR
Sequences:
>Translated_49_residues MNAPNFANQRHESSLFESAVADFKACKRTNAAFLSETTCVAVWHIDVLR >Mature_49_residues MNAPNFANQRHESSLFESAVADFKACKRTNAAFLSETTCVAVWHIDVLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5498; Mature: 5498
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPNFANQRHESSLFESAVADFKACKRTNAAFLSETTCVAVWHIDVLR CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure MNAPNFANQRHESSLFESAVADFKACKRTNAAFLSETTCVAVWHIDVLR CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA