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The map label for this gene is bioY [H]

Identifier: 110679797

GI number: 110679797

Start: 2449897

End: 2450502

Strand: Direct

Name: bioY [H]

Synonym: RD1_2561

Alternate gene names: 110679797

Gene position: 2449897-2450502 (Clockwise)

Preceding gene: 110679796

Following gene: 110679798

Centisome position: 59.28

GC content: 61.22

Gene sequence:

>606_bases
ATGCAAATGTCCGCTTCTCATTCTGTTCTGGCAGATCAATTCGGGCCTGCGGCCGGCACCGCACGGCGGATCAAACAGGC
GGTACTGGTCGTGCTGGGCATTGCCGTTCTTGCCGTGGCGGCCAATATCAAGGTGCCGGTACCGGGCTCGCCTGTTCTGA
TGAACATGGGCACCTTCGCGGTCCTGACAATCGGTGCGGCCTATGGCGCGCGGCTCGGCCTTACGACCATCATGGGCTAT
ATGATCATCGGTGCGCTTGGCTTTGACATCTTCCAAAGCTCAACAGCCGAGTTGAACGGTATCGAATACATGATGGGCAG
CACGGGCGGCTATCTGGTTGGCTATGTCATGGCCACTGTTCTGCTGGGTGCGCTGGCGCAACGCGGTTGGGACCGCTCGA
TGGTCTGGATGGCGGTTGCGATGCTGATCGGGAACATCGTGCTTTACGTGCCGGGCCTGTTGTGGCTGGGGCAACTCTAC
GGTTGGGATCAGCCGATCCTCGCGTGGGGCCTGACACCGTTCCTGCTGGGCGATGCGCTCAAGCTGCTGCTGGCGGCCAT
TCTGCTGCCGCTGGTCTGGAAACTGGTCGGCGATGCGCGGCGCTGA

Upstream 100 bases:

>100_bases
AAAAACCCTTTATACCCGCGCATAGCGTTTGTGCCCTTGCGCGGCGCGCGCACCTGCGGCATTCAGGGGCAACGACATTC
TAAACAGGAGACATCAACCG

Downstream 100 bases:

>100_bases
ACGCCTGATGCGCATGATATGACAAACAGGGGCCGGCGCATTGCGCTGGCCCTTTTTGCATTAAGGTCAATACCGTACCG
GTCTGCGTTAAACCGTTACA

Product: BioY family protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MQMSASHSVLADQFGPAAGTARRIKQAVLVVLGIAVLAVAANIKVPVPGSPVLMNMGTFAVLTIGAAYGARLGLTTIMGY
MIIGALGFDIFQSSTAELNGIEYMMGSTGGYLVGYVMATVLLGALAQRGWDRSMVWMAVAMLIGNIVLYVPGLLWLGQLY
GWDQPILAWGLTPFLLGDALKLLLAAILLPLVWKLVGDARR

Sequences:

>Translated_201_residues
MQMSASHSVLADQFGPAAGTARRIKQAVLVVLGIAVLAVAANIKVPVPGSPVLMNMGTFAVLTIGAAYGARLGLTTIMGY
MIIGALGFDIFQSSTAELNGIEYMMGSTGGYLVGYVMATVLLGALAQRGWDRSMVWMAVAMLIGNIVLYVPGLLWLGQLY
GWDQPILAWGLTPFLLGDALKLLLAAILLPLVWKLVGDARR
>Mature_201_residues
MQMSASHSVLADQFGPAAGTARRIKQAVLVVLGIAVLAVAANIKVPVPGSPVLMNMGTFAVLTIGAAYGARLGLTTIMGY
MIIGALGFDIFQSSTAELNGIEYMMGSTGGYLVGYVMATVLLGALAQRGWDRSMVWMAVAMLIGNIVLYVPGLLWLGQLY
GWDQPILAWGLTPFLLGDALKLLLAAILLPLVWKLVGDARR

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 21267; Mature: 21267

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMSASHSVLADQFGPAAGTARRIKQAVLVVLGIAVLAVAANIKVPVPGSPVLMNMGTFA
CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHH
VLTIGAAYGARLGLTTIMGYMIIGALGFDIFQSSTAELNGIEYMMGSTGGYLVGYVMATV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCHHHHHHHHHHH
LLGALAQRGWDRSMVWMAVAMLIGNIVLYVPGLLWLGQLYGWDQPILAWGLTPFLLGDAL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH
KLLLAAILLPLVWKLVGDARR
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQMSASHSVLADQFGPAAGTARRIKQAVLVVLGIAVLAVAANIKVPVPGSPVLMNMGTFA
CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHH
VLTIGAAYGARLGLTTIMGYMIIGALGFDIFQSSTAELNGIEYMMGSTGGYLVGYVMATV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCHHHHHHHHHHH
LLGALAQRGWDRSMVWMAVAMLIGNIVLYVPGLLWLGQLYGWDQPILAWGLTPFLLGDAL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH
KLLLAAILLPLVWKLVGDARR
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]