Click here to switch to the map view.

The map label for this gene is 110679782

Identifier: 110679782

GI number: 110679782

Start: 2435874

End: 2436233

Strand: Direct

Name: 110679782

Synonym: RD1_2546

Alternate gene names: NA

Gene position: 2435874-2436233 (Clockwise)

Preceding gene: 110679781

Following gene: 110679783

Centisome position: 58.94

GC content: 62.22

Gene sequence:

>360_bases
ATGCGACTGAACGAAATCCGCTTTACAGATGCCAAACCGATCGAAGGCTACGGGCCGGGTTTCTTCCGCATCGGGGGCGA
GGTGATCCATGGTCCTGTTCTGGCGGGGCCGGACGGCACGCTGCCTTGGGCGGGGTTTGACGATGATGCGGCGCTGCTGG
CCTTGGCGGGCAAGGTTGATGTGTTGTTCGTCGGCACGGGCAGTGAGATTGCGCATCTTCCCGTTGCTCTCAAGGATAGT
CTCGAAGAGGCCGGTCTTGGCATTGAGGTCATGGCGTCGCCTGCGGCATGCCGCACCTATAACATCCTGCTGAGCGAAGG
GCGGCGGATCGCGCTGGCCCTGATCCCGGTTACCGCGTGA

Upstream 100 bases:

>100_bases
TTGCTCTATCTTGGGGTCAAGCGCGACTGGTCAAAACCGGACGCCAATTCGGGCAATCAATACGCCAATATCGACCCCAA
ACCCTGACGACAGGCACGCC

Downstream 100 bases:

>100_bases
AATCGTGCTTTTGTGCCGTGGCACAATAGGTTAACGATCTGGGCATGACTGTTTCTGTAGATGATCTTTGCGTGACCCGC
GGCGGCGTCCCCATCCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF124 [H]

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MRLNEIRFTDAKPIEGYGPGFFRIGGEVIHGPVLAGPDGTLPWAGFDDDAALLALAGKVDVLFVGTGSEIAHLPVALKDS
LEEAGLGIEVMASPAACRTYNILLSEGRRIALALIPVTA

Sequences:

>Translated_119_residues
MRLNEIRFTDAKPIEGYGPGFFRIGGEVIHGPVLAGPDGTLPWAGFDDDAALLALAGKVDVLFVGTGSEIAHLPVALKDS
LEEAGLGIEVMASPAACRTYNILLSEGRRIALALIPVTA
>Mature_119_residues
MRLNEIRFTDAKPIEGYGPGFFRIGGEVIHGPVLAGPDGTLPWAGFDDDAALLALAGKVDVLFVGTGSEIAHLPVALKDS
LEEAGLGIEVMASPAACRTYNILLSEGRRIALALIPVTA

Specific function: Not required for the biogenesis of c-type cytochromes [H]

COG id: COG3737

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007523 [H]

Pfam domain/function: PF04430 DUF498 [H]

EC number: NA

Molecular weight: Translated: 12428; Mature: 12428

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNEIRFTDAKPIEGYGPGFFRIGGEVIHGPVLAGPDGTLPWAGFDDDAALLALAGKVD
CCCCCEEECCCCCCCCCCCCEEEECCEEEECCEEECCCCCCCCCCCCCCCEEEEEECCEE
VLFVGTGSEIAHLPVALKDSLEEAGLGIEVMASPAACRTYNILLSEGRRIALALIPVTA
EEEEECCCCEEECCCHHHCCHHHCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEEECC
>Mature Secondary Structure
MRLNEIRFTDAKPIEGYGPGFFRIGGEVIHGPVLAGPDGTLPWAGFDDDAALLALAGKVD
CCCCCEEECCCCCCCCCCCCEEEECCEEEECCEEECCCCCCCCCCCCCCCEEEEEECCEE
VLFVGTGSEIAHLPVALKDSLEEAGLGIEVMASPAACRTYNILLSEGRRIALALIPVTA
EEEEECCCCEEECCCHHHCCHHHCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1310666 [H]