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The map label for this gene is recJ [H]

Identifier: 110679772

GI number: 110679772

Start: 2424974

End: 2426713

Strand: Reverse

Name: recJ [H]

Synonym: RD1_2536

Alternate gene names: 110679772

Gene position: 2426713-2424974 (Counterclockwise)

Preceding gene: 110679773

Following gene: 110679771

Centisome position: 58.71

GC content: 64.48

Gene sequence:

>1740_bases
ATGAGCTTTCTGGGCATAGAGCGCTCGCTGACCGGCAGGCGCTGGATCGGACCCTCCGTCGAGATCGCGCGCGCGGCAAA
GACCCTTGAACAGCGCACGGACCTGCCCGCGCCCGTGTGTCAGGTTCTGGCCCGGCGCGGGGTGCAGGCAGAGCATGCCG
AGGGCTTTCTTGCTCCCGCCTTGCGGGACCTGATGCCCGACCCGCGCAGCCTCAAAGACATGACAAAGGCCGCTACCCGA
TTTTTGAACGCCGTGCAAAAGCGCGAAAAAATCGCGATTTTTGCGGATTATGACGTGGATGGCGGCAGTTCCGCAGCGCT
CTTGCTAGCGTGGTTGCGGCAGATGGGACGCGAGGCCACGCTTTATATTCCCGACAGGATTGATGAAGGGTACGGTCCGA
ATGATGAGGCGATGGCGCAGCTTGCCCGCAGCCATGATCTGATTGTCTGCGTCGATTGTGGCACGCTGTCTCATGGCCCG
ATCGCTGCGGCGGCGGGCGCGGATGTGCTGGTTCTGGATCATCACCTCGGCACCGAAGAGCTGCCCGACGCCCTCGCCGT
GGTCAATCCGAACCGGCAGGACGAAAGCGGCGATCTGGGGCATCTGTGTGCCGCGGGTGTCGTGTTCCTTTTGCTGGTCG
AACTGCGCCGGTTGCTGCGCGAAACGGGCCAGACGGGACCGGATCTGATGGCATTTCTGGATCTTGTCGCGCTGGCGACA
GTGGCAGATGTGGCCCCTCTGGTCGGGGTCAACCGCGCCTTTGTGCGTCAGGGTCTCAAGGTGTTGGCGCGACGGGAGCG
GGTTGGCCTGACCGCGCTCGCGGATGTGGCCGGAGTGGATACCGAACCCAACGCCTACCACCTTGGGTTCATTCTGGGGC
CGCGCGTCAATGCGGGCGGGCGGATCGGGGCGGCCGATCTTGGCGCGCGCCTGTTGGCGAGCGATGACCCGCATGAGGCG
GCGGCACTGGCCGAACGGCTCGACAAGCTGAACACGGAGCGGCGCGACATTGAAGCCGCCGTGCGCGCAACGGCCCTCGC
GCAGGCGGAGGCACGCGGGCTTGACCGCCCGCTTGTCTGGGCCGCCGGTGCGGATTGGCACCCCGGCGTGGTGGGGATCG
TTGCATCGCGGCTCAAGGAGGCCGCCGGGCGGCCCAGCATTGTCATCGGCATCACCGATGGCATCGGCAAAGGGTCGGGA
CGATCCGTTGCCGGCATTGATCTGGGCCAGCCCATCCATCGCCTGGCAGCGGAGGGTCTGCTTTTGAAAGGTGGCGGGCA
CAAGATGGCGGCGGGGCTTACGGTTGAGGAAAGCAAGATCGAACCGGCCATGGCCCGCCTGTCTGAATTGCTGGAAAAAC
AGGGGGCCGGTTCCATTGGCGCCGCCGATCTGCATATCGACGGGATGCTGATGCCCCAAGCCGCCGCCGTCGAACTGGTG
CAAAAGATTGAACAGGCCGGGCCCTTCGGTGCCGCAGCCCCCGCCCCGCGCTATGCCTTCGCGGATGTGGCGATACGTTA
CGCAAAACGCGTGGGCGAAAACCATCTCAAGATCAGCTTTGGCAGCGATGCAGGCTCCATGGACGCGATTTGCTTTGGCG
CATACGACACCGAACTTGGCCCCGCCCTGGAAATGCATGGCGGCGCGCGCTTTCATCTGGCCGGGCGTCTGGACATCAAC
ACATGGCGTGGACGCCAATCTGTACAGTTGCGCCTTGAAGACGCAGCATGCGCACAATAG

Upstream 100 bases:

>100_bases
CGATCCAAGACCGGATCGGTGCGGCGCATGAACTACCGCACGCCTGTCTCATCACCACAGGTTTGAGCCTCCCGTCGGGC
GTGATTGCTGAGGCGTCGCC

Downstream 100 bases:

>100_bases
ACGGGATAATTTTTCTACACCTCGCCCTAAATTTCCGCTTGCGCCGATGGCGCGGATTGCCTAATCAGCCCTCACAACGC
CAGTGGCCCGTTCGTCTATC

Product: single-stranded-DNA-specific exonuclease RecJ, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MSFLGIERSLTGRRWIGPSVEIARAAKTLEQRTDLPAPVCQVLARRGVQAEHAEGFLAPALRDLMPDPRSLKDMTKAATR
FLNAVQKREKIAIFADYDVDGGSSAALLLAWLRQMGREATLYIPDRIDEGYGPNDEAMAQLARSHDLIVCVDCGTLSHGP
IAAAAGADVLVLDHHLGTEELPDALAVVNPNRQDESGDLGHLCAAGVVFLLLVELRRLLRETGQTGPDLMAFLDLVALAT
VADVAPLVGVNRAFVRQGLKVLARRERVGLTALADVAGVDTEPNAYHLGFILGPRVNAGGRIGAADLGARLLASDDPHEA
AALAERLDKLNTERRDIEAAVRATALAQAEARGLDRPLVWAAGADWHPGVVGIVASRLKEAAGRPSIVIGITDGIGKGSG
RSVAGIDLGQPIHRLAAEGLLLKGGGHKMAAGLTVEESKIEPAMARLSELLEKQGAGSIGAADLHIDGMLMPQAAAVELV
QKIEQAGPFGAAAPAPRYAFADVAIRYAKRVGENHLKISFGSDAGSMDAICFGAYDTELGPALEMHGGARFHLAGRLDIN
TWRGRQSVQLRLEDAACAQ

Sequences:

>Translated_579_residues
MSFLGIERSLTGRRWIGPSVEIARAAKTLEQRTDLPAPVCQVLARRGVQAEHAEGFLAPALRDLMPDPRSLKDMTKAATR
FLNAVQKREKIAIFADYDVDGGSSAALLLAWLRQMGREATLYIPDRIDEGYGPNDEAMAQLARSHDLIVCVDCGTLSHGP
IAAAAGADVLVLDHHLGTEELPDALAVVNPNRQDESGDLGHLCAAGVVFLLLVELRRLLRETGQTGPDLMAFLDLVALAT
VADVAPLVGVNRAFVRQGLKVLARRERVGLTALADVAGVDTEPNAYHLGFILGPRVNAGGRIGAADLGARLLASDDPHEA
AALAERLDKLNTERRDIEAAVRATALAQAEARGLDRPLVWAAGADWHPGVVGIVASRLKEAAGRPSIVIGITDGIGKGSG
RSVAGIDLGQPIHRLAAEGLLLKGGGHKMAAGLTVEESKIEPAMARLSELLEKQGAGSIGAADLHIDGMLMPQAAAVELV
QKIEQAGPFGAAAPAPRYAFADVAIRYAKRVGENHLKISFGSDAGSMDAICFGAYDTELGPALEMHGGARFHLAGRLDIN
TWRGRQSVQLRLEDAACAQ
>Mature_578_residues
SFLGIERSLTGRRWIGPSVEIARAAKTLEQRTDLPAPVCQVLARRGVQAEHAEGFLAPALRDLMPDPRSLKDMTKAATRF
LNAVQKREKIAIFADYDVDGGSSAALLLAWLRQMGREATLYIPDRIDEGYGPNDEAMAQLARSHDLIVCVDCGTLSHGPI
AAAAGADVLVLDHHLGTEELPDALAVVNPNRQDESGDLGHLCAAGVVFLLLVELRRLLRETGQTGPDLMAFLDLVALATV
ADVAPLVGVNRAFVRQGLKVLARRERVGLTALADVAGVDTEPNAYHLGFILGPRVNAGGRIGAADLGARLLASDDPHEAA
ALAERLDKLNTERRDIEAAVRATALAQAEARGLDRPLVWAAGADWHPGVVGIVASRLKEAAGRPSIVIGITDGIGKGSGR
SVAGIDLGQPIHRLAAEGLLLKGGGHKMAAGLTVEESKIEPAMARLSELLEKQGAGSIGAADLHIDGMLMPQAAAVELVQ
KIEQAGPFGAAAPAPRYAFADVAIRYAKRVGENHLKISFGSDAGSMDAICFGAYDTELGPALEMHGGARFHLAGRLDINT
WRGRQSVQLRLEDAACAQ

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=579, Percent_Identity=36.4421416234888, Blast_Score=283, Evalue=2e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 61209; Mature: 61078

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLGIERSLTGRRWIGPSVEIARAAKTLEQRTDLPAPVCQVLARRGVQAEHAEGFLAPA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHCCHHHHH
LRDLMPDPRSLKDMTKAATRFLNAVQKREKIAIFADYDVDGGSSAALLLAWLRQMGREAT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEE
LYIPDRIDEGYGPNDEAMAQLARSHDLIVCVDCGTLSHGPIAAAAGADVLVLDHHLGTEE
EEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEECCCCCCEEEEECCCCCHH
LPDALAVVNPNRQDESGDLGHLCAAGVVFLLLVELRRLLRETGQTGPDLMAFLDLVALAT
CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VADVAPLVGVNRAFVRQGLKVLARRERVGLTALADVAGVDTEPNAYHLGFILGPRVNAGG
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCC
RIGAADLGARLLASDDPHEAAALAERLDKLNTERRDIEAAVRATALAQAEARGLDRPLVW
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
AAGADWHPGVVGIVASRLKEAAGRPSIVIGITDGIGKGSGRSVAGIDLGQPIHRLAAEGL
ECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHCCE
LLKGGGHKMAAGLTVEESKIEPAMARLSELLEKQGAGSIGAADLHIDGMLMPQAAAVELV
EEECCCCEEEECCEEEHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCEECCHHHHHHHH
QKIEQAGPFGAAAPAPRYAFADVAIRYAKRVGENHLKISFGSDAGSMDAICFGAYDTELG
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCC
PALEMHGGARFHLAGRLDINTWRGRQSVQLRLEDAACAQ
CCCEECCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
SFLGIERSLTGRRWIGPSVEIARAAKTLEQRTDLPAPVCQVLARRGVQAEHAEGFLAPA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHCCHHHHH
LRDLMPDPRSLKDMTKAATRFLNAVQKREKIAIFADYDVDGGSSAALLLAWLRQMGREAT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEE
LYIPDRIDEGYGPNDEAMAQLARSHDLIVCVDCGTLSHGPIAAAAGADVLVLDHHLGTEE
EEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEECCCCCCEEEEECCCCCHH
LPDALAVVNPNRQDESGDLGHLCAAGVVFLLLVELRRLLRETGQTGPDLMAFLDLVALAT
CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VADVAPLVGVNRAFVRQGLKVLARRERVGLTALADVAGVDTEPNAYHLGFILGPRVNAGG
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCC
RIGAADLGARLLASDDPHEAAALAERLDKLNTERRDIEAAVRATALAQAEARGLDRPLVW
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
AAGADWHPGVVGIVASRLKEAAGRPSIVIGITDGIGKGSGRSVAGIDLGQPIHRLAAEGL
ECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHCCE
LLKGGGHKMAAGLTVEESKIEPAMARLSELLEKQGAGSIGAADLHIDGMLMPQAAAVELV
EEECCCCEEEECCEEEHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCEECCHHHHHHHH
QKIEQAGPFGAAAPAPRYAFADVAIRYAKRVGENHLKISFGSDAGSMDAICFGAYDTELG
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCC
PALEMHGGARFHLAGRLDINTWRGRQSVQLRLEDAACAQ
CCCEECCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]