Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is glpX [H]

Identifier: 110679773

GI number: 110679773

Start: 2426748

End: 2427722

Strand: Reverse

Name: glpX [H]

Synonym: RD1_2537

Alternate gene names: 110679773

Gene position: 2427722-2426748 (Counterclockwise)

Preceding gene: 110679774

Following gene: 110679772

Centisome position: 58.74

GC content: 63.9

Gene sequence:

>975_bases
ATGCCTGCCACCGCCGAATTTCACGACCGCATGTTGTCGCTGGGCCTCGCCCGCGTTTCCGAAGCAGCAGCGCTGGCCTC
TGCCCGTCTGGTCGGTCACGGAGATGAGAAGGCCGCCGATCAGGCCGCCGTCAACGCCATGCGCGAACAGCTCAACATGC
TGGACATTGCAGGAGTGGTCGTAATCGGTGAAGGCGAACGCGACGAGGCCCCGATGCTGTTCATCGGCGAAGAGGTCGGC
ACCGGCAACGGACCCGGCGTCGATATCGCGCTGGACCCGCTGGAAGGGACAACCCTGACAGCCAAGGACATGCCAAACGC
CCTGACGGTGATTGCAATGGGGCCGCGCGGCTCGATGCTGCATGCACCGGATGTGTATATGGACAAGCTGGCGATCGGGC
CGGGTTTTGCGGAAAACGTCGTCACCCTTGATATGAGCCCCGCCGAACGTGTCGCAGCGCTCGCCGCCGCCAAGGGCTGT
GCGGCATCCGATATCACGGTCTGCATCCTCGAACGCCCCCGCCACGAGGCCATGATCAGCGAAGTGCGCGCCACCGGCGC
ATCGATCCGCCTGATCACCGACGGCGATGTGGCCGGTGTCATGCACTGCGCAGAACCCGACACCGGCATCGACATGTACA
TGGGCGAAGGTGGCGCACCCGAAGGCGTGCTGGCCGCGGCGGCATTGAAATGCATGGGCGGCCAGATGTTCGGACGGTTG
CTGTTTCGCAACGAGGACGAACGCGGACGCGCGGCCAAAGCGGGCATAACCGATCTCGACCGTGTCTATGCGCGTGATGA
CATGGTGACCGAAGACGTCATCTTTGCCGCAACCGGGGTGACCGGCGGCAGCATCTTGGCCGGCGTGCACCGCGAACCGG
GCTGGATGACAACCGAAACGCTGATCATGCGATCCAAGACCGGATCGGTGCGGCGCATGAACTACCGCACGCCTGTCTCA
TCACCACAGGTTTGA

Upstream 100 bases:

>100_bases
TATCGAAGACGTCTGACACGGACAGCATCATTGTTCTTATCCTCCGGGGCGGCTACAACGCGCCCCGACGCTCATTCTTC
TGGACCAAAAGGAATTTGTA

Downstream 100 bases:

>100_bases
GCCTCCCGTCGGGCGTGATTGCTGAGGCGTCGCCATGAGCTTTCTGGGCATAGAGCGCTCGCTGACCGGCAGGCGCTGGA
TCGGACCCTCCGTCGAGATC

Product: fructose 1,6-bisphosphatase II

Products: NA

Alternate protein names: FBPase class 2; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 2 [H]

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MPATAEFHDRMLSLGLARVSEAAALASARLVGHGDEKAADQAAVNAMREQLNMLDIAGVVVIGEGERDEAPMLFIGEEVG
TGNGPGVDIALDPLEGTTLTAKDMPNALTVIAMGPRGSMLHAPDVYMDKLAIGPGFAENVVTLDMSPAERVAALAAAKGC
AASDITVCILERPRHEAMISEVRATGASIRLITDGDVAGVMHCAEPDTGIDMYMGEGGAPEGVLAAAALKCMGGQMFGRL
LFRNEDERGRAAKAGITDLDRVYARDDMVTEDVIFAATGVTGGSILAGVHREPGWMTTETLIMRSKTGSVRRMNYRTPVS
SPQV

Sequences:

>Translated_324_residues
MPATAEFHDRMLSLGLARVSEAAALASARLVGHGDEKAADQAAVNAMREQLNMLDIAGVVVIGEGERDEAPMLFIGEEVG
TGNGPGVDIALDPLEGTTLTAKDMPNALTVIAMGPRGSMLHAPDVYMDKLAIGPGFAENVVTLDMSPAERVAALAAAKGC
AASDITVCILERPRHEAMISEVRATGASIRLITDGDVAGVMHCAEPDTGIDMYMGEGGAPEGVLAAAALKCMGGQMFGRL
LFRNEDERGRAAKAGITDLDRVYARDDMVTEDVIFAATGVTGGSILAGVHREPGWMTTETLIMRSKTGSVRRMNYRTPVS
SPQV
>Mature_323_residues
PATAEFHDRMLSLGLARVSEAAALASARLVGHGDEKAADQAAVNAMREQLNMLDIAGVVVIGEGERDEAPMLFIGEEVGT
GNGPGVDIALDPLEGTTLTAKDMPNALTVIAMGPRGSMLHAPDVYMDKLAIGPGFAENVVTLDMSPAERVAALAAAKGCA
ASDITVCILERPRHEAMISEVRATGASIRLITDGDVAGVMHCAEPDTGIDMYMGEGGAPEGVLAAAALKCMGGQMFGRLL
FRNEDERGRAAKAGITDLDRVYARDDMVTEDVIFAATGVTGGSILAGVHREPGWMTTETLIMRSKTGSVRRMNYRTPVSS
PQV

Specific function: Catalyzes the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate [H]

COG id: COG1494

COG function: function code G; Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FBPase class 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790360, Length=319, Percent_Identity=46.0815047021944, Blast_Score=261, Evalue=5e-71,
Organism=Escherichia coli, GI1789298, Length=306, Percent_Identity=41.5032679738562, Blast_Score=208, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004464 [H]

Pfam domain/function: PF03320 FBPase_glpX [H]

EC number: =3.1.3.11 [H]

Molecular weight: Translated: 33968; Mature: 33837

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATAEFHDRMLSLGLARVSEAAALASARLVGHGDEKAADQAAVNAMREQLNMLDIAGVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEEE
VIGEGERDEAPMLFIGEEVGTGNGPGVDIALDPLEGTTLTAKDMPNALTVIAMGPRGSML
EECCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCCEEEEEEECCCCCEE
HAPDVYMDKLAIGPGFAENVVTLDMSPAERVAALAAAKGCAASDITVCILERPRHEAMIS
ECCCHHHHHEECCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHH
EVRATGASIRLITDGDVAGVMHCAEPDTGIDMYMGEGGAPEGVLAAAALKCMGGQMFGRL
HHHHCCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCHHHHHHH
LFRNEDERGRAAKAGITDLDRVYARDDMVTEDVIFAATGVTGGSILAGVHREPGWMTTET
HHCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCHHH
LIMRSKTGSVRRMNYRTPVSSPQV
EEEECCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
PATAEFHDRMLSLGLARVSEAAALASARLVGHGDEKAADQAAVNAMREQLNMLDIAGVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEEE
VIGEGERDEAPMLFIGEEVGTGNGPGVDIALDPLEGTTLTAKDMPNALTVIAMGPRGSML
EECCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCCEEEEEEECCCCCEE
HAPDVYMDKLAIGPGFAENVVTLDMSPAERVAALAAAKGCAASDITVCILERPRHEAMIS
ECCCHHHHHEECCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHH
EVRATGASIRLITDGDVAGVMHCAEPDTGIDMYMGEGGAPEGVLAAAALKCMGGQMFGRL
HHHHCCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCHHHHHHH
LFRNEDERGRAAKAGITDLDRVYARDDMVTEDVIFAATGVTGGSILAGVHREPGWMTTET
HHCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCHHH
LIMRSKTGSVRRMNYRTPVSSPQV
EEEECCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]