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The map label for this gene is trkH [C]

Identifier: 110679710

GI number: 110679710

Start: 2351204

End: 2352634

Strand: Reverse

Name: trkH [C]

Synonym: RD1_2465

Alternate gene names: 110679710

Gene position: 2352634-2351204 (Counterclockwise)

Preceding gene: 110679712

Following gene: 110679709

Centisome position: 56.92

GC content: 59.54

Gene sequence:

>1431_bases
ATGGTCTTGCAATCCGCTCGGCTGTCCCGCGTGTCGCTGGCGCTGGCCAAGCACGGCGTCCTGTTGCCCCTTGTTTTTCT
GCCGCCGACGGTATGGGCCGCCTCTGAATTGGCCTGGGGCCTTGTGCTGGCATTGCTGGCGCCAGCCGCTCTGGGCGGCG
GACTGTCGCTTGCTGTCGCACGAACCGCTCTGCCCAAGGATTTACGGCAGGTCGAAGCGATCGTTGTGCTGGCGCTGCTG
TTTGTTCTGACGCCCGTGTTGTCGATACCGGCTTTCATGACCCTCGGCATGCCTCCAGTTGATGCGCTTTTTGAGGGTAT
GAGCGCTCTGACAACAACCGGCCTTTCGGTTGCGACCAACGCGGACACATGGCCATTTGCAGGTCACCTGCTGCGCAGTT
GGATGCAGTGGTGCGGCGGGCTTGCGATGGCAACTGCCGTCCTTGCCATGCTCATAGGGCCCGGTGTTACCGCGCGAAAA
CTCGGCAAGGTCAACATGGATGACGGCGATCTCATATCATCGACGCGCACGCACGCCCGCCAGCTTCTGGGTGCCTATGC
AGGAATTACCCTGGTTTTCGGCGCTGCGATCTCGGCCAGTATCGGATCCGTACCCGAAGGCCTGCTCTTGACGCTGTCGG
CTGTTTCTACCGGCGGTTTTGCGTATCTGCCGGATTCGGTCGCATCTTATGCGCCGATGACGCAGGGCCTGACGATATCG
GCATCTCTTTGCGGCGCGGTATCATTGCTCGCAGTCGCGCTGTTGTGCAAGAGAGACTGGTCCAACGCATGGTTGACCGG
CTCGCTGCAACGTATGGCGCTTTGGTCCATGGGCTGCGTTCTGACGCTCTGCATATGCGTTTGGGTATTAGGCGGATCCG
GCTATTACGTTCACGCCTGGAATTTGCTCAGTGCCATCAGCACGGCAGGCTATTCCATCGGCGCGATGCCCACTGAACCG
GTACTGCTTGTTTTTTTCATTGCGGTCATGGCCATCGGGGGGGATGTCGGATCAACCGCCGGTGGCATAAAACTGGCGCG
TTTCTTGACCTTGATGCGCACGGGTCAGCATGCCGCGCGTGGGCCGAGGTTGCCAGTGAACGCCGTGGCCCCCATGCGGG
AACACGGGCAGGTGTTGAAACAAAGCCAATTGATCGCCCTATTGGCGCTGCTCCTGTTTTACTCCGTTTTCGTGCTGAGC
TTGTGGACGTTATTCCTCGCCCATGGCCATCCGCCACTGCCTGCTCTTTTCGATGCGGTGTCGGCATTTTCAACCGTCGG
CCTGTCCACAGGCGTCATAGGCGCTGACAACCCTGCCCTGCTCAAAATCGCGACAACCTTCGCAATGCTTCTGGGCCGGC
TGGAGTTTGTCGCGGTGCTGCTGCTTGTCTTGCCCAGAACCTGGCACATCCCACATCACAGGAGAAAATAA

Upstream 100 bases:

>100_bases
ATGCGTGTTGCTCCTACATGGTTTTATTTTCCTCTTCCTGCGCAACGACAGCGATGGCGGCATCATGACAAAATCCGTGA
CACGCAAGTCAGGTGCAGAA

Downstream 100 bases:

>100_bases
TGCGTATTGTCATCGTCGGAGGCTCCAAATTCGGGGTCGCAACCGCTGAACAACTCATCGACAAAGGTCATGAGGTCGTC
TTGATCGACAAGAACCGTGA

Product: Trk potassium uptake system protein, transmembrane component

Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MVLQSARLSRVSLALAKHGVLLPLVFLPPTVWAASELAWGLVLALLAPAALGGGLSLAVARTALPKDLRQVEAIVVLALL
FVLTPVLSIPAFMTLGMPPVDALFEGMSALTTTGLSVATNADTWPFAGHLLRSWMQWCGGLAMATAVLAMLIGPGVTARK
LGKVNMDDGDLISSTRTHARQLLGAYAGITLVFGAAISASIGSVPEGLLLTLSAVSTGGFAYLPDSVASYAPMTQGLTIS
ASLCGAVSLLAVALLCKRDWSNAWLTGSLQRMALWSMGCVLTLCICVWVLGGSGYYVHAWNLLSAISTAGYSIGAMPTEP
VLLVFFIAVMAIGGDVGSTAGGIKLARFLTLMRTGQHAARGPRLPVNAVAPMREHGQVLKQSQLIALLALLLFYSVFVLS
LWTLFLAHGHPPLPALFDAVSAFSTVGLSTGVIGADNPALLKIATTFAMLLGRLEFVAVLLLVLPRTWHIPHHRRK

Sequences:

>Translated_476_residues
MVLQSARLSRVSLALAKHGVLLPLVFLPPTVWAASELAWGLVLALLAPAALGGGLSLAVARTALPKDLRQVEAIVVLALL
FVLTPVLSIPAFMTLGMPPVDALFEGMSALTTTGLSVATNADTWPFAGHLLRSWMQWCGGLAMATAVLAMLIGPGVTARK
LGKVNMDDGDLISSTRTHARQLLGAYAGITLVFGAAISASIGSVPEGLLLTLSAVSTGGFAYLPDSVASYAPMTQGLTIS
ASLCGAVSLLAVALLCKRDWSNAWLTGSLQRMALWSMGCVLTLCICVWVLGGSGYYVHAWNLLSAISTAGYSIGAMPTEP
VLLVFFIAVMAIGGDVGSTAGGIKLARFLTLMRTGQHAARGPRLPVNAVAPMREHGQVLKQSQLIALLALLLFYSVFVLS
LWTLFLAHGHPPLPALFDAVSAFSTVGLSTGVIGADNPALLKIATTFAMLLGRLEFVAVLLLVLPRTWHIPHHRRK
>Mature_476_residues
MVLQSARLSRVSLALAKHGVLLPLVFLPPTVWAASELAWGLVLALLAPAALGGGLSLAVARTALPKDLRQVEAIVVLALL
FVLTPVLSIPAFMTLGMPPVDALFEGMSALTTTGLSVATNADTWPFAGHLLRSWMQWCGGLAMATAVLAMLIGPGVTARK
LGKVNMDDGDLISSTRTHARQLLGAYAGITLVFGAAISASIGSVPEGLLLTLSAVSTGGFAYLPDSVASYAPMTQGLTIS
ASLCGAVSLLAVALLCKRDWSNAWLTGSLQRMALWSMGCVLTLCICVWVLGGSGYYVHAWNLLSAISTAGYSIGAMPTEP
VLLVFFIAVMAIGGDVGSTAGGIKLARFLTLMRTGQHAARGPRLPVNAVAPMREHGQVLKQSQLIALLALLLFYSVFVLS
LWTLFLAHGHPPLPALFDAVSAFSTVGLSTGVIGADNPALLKIATTFAMLLGRLEFVAVLLLVLPRTWHIPHHRRK

Specific function: Low-Affinity Potassium Transport System. Interacts With Trk System Potassium Uptake Protein Trka. Trke Increases The Affinity Of The System. [C]

COG id: COG0168

COG function: function code P; Trk-type K+ transport systems, membrane components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trkH potassium transport family [H]

Homologues:

Organism=Escherichia coli, GI1787626, Length=443, Percent_Identity=24.3792325056433, Blast_Score=96, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003445 [H]

Pfam domain/function: PF02386 TrkH [H]

EC number: NA

Molecular weight: Translated: 49940; Mature: 49940

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLQSARLSRVSLALAKHGVLLPLVFLPPTVWAASELAWGLVLALLAPAALGGGLSLAVA
CCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RTALPKDLRQVEAIVVLALLFVLTPVLSIPAFMTLGMPPVDALFEGMSALTTTGLSVATN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECC
ADTWPFAGHLLRSWMQWCGGLAMATAVLAMLIGPGVTARKLGKVNMDDGDLISSTRTHAR
CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHH
QLLGAYAGITLVFGAAISASIGSVPEGLLLTLSAVSTGGFAYLPDSVASYAPMTQGLTIS
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEECCHHHHHHCCCCCCCEEH
ASLCGAVSLLAVALLCKRDWSNAWLTGSLQRMALWSMGCVLTLCICVWVLGGSGYYVHAW
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHH
NLLSAISTAGYSIGAMPTEPVLLVFFIAVMAIGGDVGSTAGGIKLARFLTLMRTGQHAAR
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHC
GPRLPVNAVAPMREHGQVLKQSQLIALLALLLFYSVFVLSLWTLFLAHGHPPLPALFDAV
CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SAFSTVGLSTGVIGADNPALLKIATTFAMLLGRLEFVAVLLLVLPRTWHIPHHRRK
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVLQSARLSRVSLALAKHGVLLPLVFLPPTVWAASELAWGLVLALLAPAALGGGLSLAVA
CCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RTALPKDLRQVEAIVVLALLFVLTPVLSIPAFMTLGMPPVDALFEGMSALTTTGLSVATN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECC
ADTWPFAGHLLRSWMQWCGGLAMATAVLAMLIGPGVTARKLGKVNMDDGDLISSTRTHAR
CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHH
QLLGAYAGITLVFGAAISASIGSVPEGLLLTLSAVSTGGFAYLPDSVASYAPMTQGLTIS
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEECCHHHHHHCCCCCCCEEH
ASLCGAVSLLAVALLCKRDWSNAWLTGSLQRMALWSMGCVLTLCICVWVLGGSGYYVHAW
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHH
NLLSAISTAGYSIGAMPTEPVLLVFFIAVMAIGGDVGSTAGGIKLARFLTLMRTGQHAAR
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHC
GPRLPVNAVAPMREHGQVLKQSQLIALLALLLFYSVFVLSLWTLFLAHGHPPLPALFDAV
CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SAFSTVGLSTGVIGADNPALLKIATTFAMLLGRLEFVAVLLLVLPRTWHIPHHRRK
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]

Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]