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The map label for this gene is trkA [H]

Identifier: 110679709

GI number: 110679709

Start: 2350554

End: 2351204

Strand: Reverse

Name: trkA [H]

Synonym: RD1_2464

Alternate gene names: 110679709

Gene position: 2351204-2350554 (Counterclockwise)

Preceding gene: 110679710

Following gene: 110679707

Centisome position: 56.89

GC content: 57.14

Gene sequence:

>651_bases
ATGCGTATTGTCATCGTCGGAGGCTCCAAATTCGGGGTCGCAACCGCTGAACAACTCATCGACAAAGGTCATGAGGTCGT
CTTGATCGACAAGAACCGTGAGAAACTGGAAGCTCTCACGGATCGGCTGGATTGCGGCATGATCCAGGGCGATGGATCTT
CGCCCAAGGTCCTGCGAGAAGCCTACGCGGAGGAAAACGATGTCCTGGTCGCCCTGACCAATGCCTCAGATGACAACATT
CTGACCGCGCTCGTTGCACGCTCTGTCGGGTTTGGGCGGGTCATCCCGCAAATCGTGGAAGCGGAATTGCTGGACGTCTG
CGTTGAGCTGGATCTGAAAGACACGATAACGCCCCATGTCACCGTCGCCCGTAGCATCTGCCGTGCGCTGGAGGAAGACA
CCGAATTGGCGCGCGACACCAACCTCACTGGTGATCTGAGGCTCTTGCGCCTGTCCGTGACGTCTCAATTGAGTGGCTGC
AGCCTGTCGGAACTGGATCTGCCCGATGAATGTCGGGCGGTCGCCATTGTGCATGAGGACCGCGAAAAATTTGCTGACCC
GGATGCGGTTGTGAGCGAGGGTGAAGATATTCTGTTTGCGGTTCACGAAGACCGCGTTGCAGACCTCAAGGCGTTGTTCG
CCACATCGTGA

Upstream 100 bases:

>100_bases
CGACAACCTTCGCAATGCTTCTGGGCCGGCTGGAGTTTGTCGCGGTGCTGCTGCTTGTCTTGCCCAGAACCTGGCACATC
CCACATCACAGGAGAAAATA

Downstream 100 bases:

>100_bases
ACATGCGCTGGTCCCTTGAAACAAGGGACCGGCACCCTCTGGTCTGGCATGTCTGATGACACACCTGAAGCACCAAGCAC
CACGTAACGCGTTGAAATAT

Product: Trk potassium uptake system protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA homolog [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MRIVIVGGSKFGVATAEQLIDKGHEVVLIDKNREKLEALTDRLDCGMIQGDGSSPKVLREAYAEENDVLVALTNASDDNI
LTALVARSVGFGRVIPQIVEAELLDVCVELDLKDTITPHVTVARSICRALEEDTELARDTNLTGDLRLLRLSVTSQLSGC
SLSELDLPDECRAVAIVHEDREKFADPDAVVSEGEDILFAVHEDRVADLKALFATS

Sequences:

>Translated_216_residues
MRIVIVGGSKFGVATAEQLIDKGHEVVLIDKNREKLEALTDRLDCGMIQGDGSSPKVLREAYAEENDVLVALTNASDDNI
LTALVARSVGFGRVIPQIVEAELLDVCVELDLKDTITPHVTVARSICRALEEDTELARDTNLTGDLRLLRLSVTSQLSGC
SLSELDLPDECRAVAIVHEDREKFADPDAVVSEGEDILFAVHEDRVADLKALFATS
>Mature_216_residues
MRIVIVGGSKFGVATAEQLIDKGHEVVLIDKNREKLEALTDRLDCGMIQGDGSSPKVLREAYAEENDVLVALTNASDDNI
LTALVARSVGFGRVIPQIVEAELLDVCVELDLKDTITPHVTVARSICRALEEDTELARDTNLTGDLRLLRLSVTSQLSGC
SLSELDLPDECRAVAIVHEDREKFADPDAVVSEGEDILFAVHEDRVADLKALFATS

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=211, Percent_Identity=28.436018957346, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 23468; Mature: 23468

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVIVGGSKFGVATAEQLIDKGHEVVLIDKNREKLEALTDRLDCGMIQGDGSSPKVLRE
CEEEEECCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEECCCCCHHHHHH
AYAEENDVLVALTNASDDNILTALVARSVGFGRVIPQIVEAELLDVCVELDLKDTITPHV
HHCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
TVARSICRALEEDTELARDTNLTGDLRLLRLSVTSQLSGCSLSELDLPDECRAVAIVHED
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCCCCCHHHCEEEEEECC
REKFADPDAVVSEGEDILFAVHEDRVADLKALFATS
HHHHCCCHHHHHCCCEEEEEECCCHHHHHHHHHCCC
>Mature Secondary Structure
MRIVIVGGSKFGVATAEQLIDKGHEVVLIDKNREKLEALTDRLDCGMIQGDGSSPKVLRE
CEEEEECCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEECCCCCHHHHHH
AYAEENDVLVALTNASDDNILTALVARSVGFGRVIPQIVEAELLDVCVELDLKDTITPHV
HHCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
TVARSICRALEEDTELARDTNLTGDLRLLRLSVTSQLSGCSLSELDLPDECRAVAIVHED
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCCCCCHHHCEEEEEECC
REKFADPDAVVSEGEDILFAVHEDRVADLKALFATS
HHHHCCCHHHHHCCCEEEEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]