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The map label for this gene is 110679700

Identifier: 110679700

GI number: 110679700

Start: 2342926

End: 2343528

Strand: Reverse

Name: 110679700

Synonym: RD1_2455

Alternate gene names: NA

Gene position: 2343528-2342926 (Counterclockwise)

Preceding gene: 110679701

Following gene: 110679695

Centisome position: 56.7

GC content: 54.39

Gene sequence:

>603_bases
ATGCGAACCATTACCATGTCAGAAAATGACCTGCAGACCCAATTTACCGATACAATTGATCGCGTTAGCTCCATCAGTGA
GCATGGCGACACGACGACCATAGGCGAGGTGACGAAAGCGGTCGGCGGCCGCTCGCACCTCACTGTCATTCTGCTGGCAG
CCGCACTTGCATCCACCCCACTCAGCGGTATCCCGGGTCTTGCAACCGTGTGTGGTCTTATCATTGCGCTCAGTTCAGCC
CAGGCATTATGCGGGCGCGACAGGGTCCGTCTTCCAAAGTTCTTGAGCCGCAAATCACTGAACAACGACAGTTTGTCCGG
CGCCTTGTCATTTCTGAGGAAATGCTCATCCTTTCTGGACAACCACACCGCGCCACGCTTCGACATTCTGGTGACAGGCC
CCGCACGCACCTTGCTTTTCAGCTTCTTTCTGATCGGTGGATTGTTAATGCCGGTGCTTGAGCTCATTCCATTCTCATCA
TCCATCATGGCCGCAACAATTGCCTTCTTCAGTATCGCCGCTGTATCGCGTGATGGATTATGGGCTGCCATGGGCATTTT
GACGATTGGCACATGCGCCACCATGCTGGTCTGGCTGGTGTAG

Upstream 100 bases:

>100_bases
AACGGGTTCAGGGCAAACCTCCCCACAGCGCCCCGGAACATTCTCAACCCTCGGACGTTCCAGTTACCGGACGGGCTAAA
CGCTTTCATTTGATAGGAAA

Downstream 100 bases:

>100_bases
GGCTGCGTGTCAGTTGGACAATGCTGCTTGCCGATGTGTTTTCCTTGACAACCAAATTCCGCGGGGCGCCTCGTGTTGCC
GAATTATGCAGTTGATTGGC

Product: ExoD family exopolysaccharide synthesis protein

Products: NA

Alternate protein names: Exopolysaccharide Synthesis Protein; ExoD-Like Membrane Protein; Exopolysaccharide Synthesis ExoD Protein; ABC-Type Transport System Permease Component; ExoD Family Exopolysaccharide Synthesis Protein; ABC Transporter Permease; ABC Molybdate Transporter Inner Membrane Subunit

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MRTITMSENDLQTQFTDTIDRVSSISEHGDTTTIGEVTKAVGGRSHLTVILLAAALASTPLSGIPGLATVCGLIIALSSA
QALCGRDRVRLPKFLSRKSLNNDSLSGALSFLRKCSSFLDNHTAPRFDILVTGPARTLLFSFFLIGGLLMPVLELIPFSS
SIMAATIAFFSIAAVSRDGLWAAMGILTIGTCATMLVWLV

Sequences:

>Translated_200_residues
MRTITMSENDLQTQFTDTIDRVSSISEHGDTTTIGEVTKAVGGRSHLTVILLAAALASTPLSGIPGLATVCGLIIALSSA
QALCGRDRVRLPKFLSRKSLNNDSLSGALSFLRKCSSFLDNHTAPRFDILVTGPARTLLFSFFLIGGLLMPVLELIPFSS
SIMAATIAFFSIAAVSRDGLWAAMGILTIGTCATMLVWLV
>Mature_200_residues
MRTITMSENDLQTQFTDTIDRVSSISEHGDTTTIGEVTKAVGGRSHLTVILLAAALASTPLSGIPGLATVCGLIIALSSA
QALCGRDRVRLPKFLSRKSLNNDSLSGALSFLRKCSSFLDNHTAPRFDILVTGPARTLLFSFFLIGGLLMPVLELIPFSS
SIMAATIAFFSIAAVSRDGLWAAMGILTIGTCATMLVWLV

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21221; Mature: 21221

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTITMSENDLQTQFTDTIDRVSSISEHGDTTTIGEVTKAVGGRSHLTVILLAAALASTP
CCEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
LSGIPGLATVCGLIIALSSAQALCGRDRVRLPKFLSRKSLNNDSLSGALSFLRKCSSFLD
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
NHTAPRFDILVTGPARTLLFSFFLIGGLLMPVLELIPFSSSIMAATIAFFSIAAVSRDGL
CCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH
WAAMGILTIGTCATMLVWLV
HHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRTITMSENDLQTQFTDTIDRVSSISEHGDTTTIGEVTKAVGGRSHLTVILLAAALASTP
CCEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
LSGIPGLATVCGLIIALSSAQALCGRDRVRLPKFLSRKSLNNDSLSGALSFLRKCSSFLD
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
NHTAPRFDILVTGPARTLLFSFFLIGGLLMPVLELIPFSSSIMAATIAFFSIAAVSRDGL
CCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH
WAAMGILTIGTCATMLVWLV
HHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA