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The map label for this gene is potC [H]

Identifier: 110679676

GI number: 110679676

Start: 2316820

End: 2317641

Strand: Direct

Name: potC [H]

Synonym: RD1_2430

Alternate gene names: 110679676

Gene position: 2316820-2317641 (Clockwise)

Preceding gene: 110679675

Following gene: 110679677

Centisome position: 56.06

GC content: 59.12

Gene sequence:

>822_bases
ATGGCGCATCGCAGCACCGTTTCGGACCGGTCCTATTCCATTGTCATGGGCGGCCTTGCAGCACTTGGCATCCTGATCCT
TGTGGGTCCCGTGATCATCGTGCTGCTCACGTCGTTCACATCGTCCCGCGTGTTGACCTTTCCGCCGCCGGGTTTTTCGC
TTGAATGGTATGCGGCGCTTTTTGATCCGGTGAAGTCGGGTCATATCCATTCGGCCTTGGCCAATTCCCTCTATGTCGCC
GCGATTGCCACGGCCCTCGCTGTCCTGCTTGCAACGGCTGCGGCACTGGCCATGGCCCGGTCCAGGGGGGCCTCTGCGCG
CGCACTCGAAGCCAGCTTCATGTCACCCCTGATCTTGCCGGGATTGTCCTTTGGCTTGGCGGCGTTGATGTTTTTCTCGA
TCCTCGGGTTTCGTCCATCGATCAATCACCTGATTGCGGGGCATCTTGTGGTGATCGCGCCTTTCGTCTTTCGCACGACG
CTCGCGAGCCTGTCACAATTCAACCCGGCACTTCTGGAAAGCTCTGCCAGCCTTGGGGCAGGGCGCTTTTATGCGTTCCG
CCGGATTACGCTGCCAATCATCACGCCGGGCATTGTTGCGGGCGGATTTCTGGCATTCGTGGCGTCGATGGACAACGTGC
CGGTGTCGCTGTTCCTGTCCAATGCCCGCACCAATATGCTGCCCATTCGCATGTGGGGCATGATGGAAACCACCCTTGAT
GTGCGCGTGGCCGCGATTTCCGGTGTGATCATCATCGCCGTGCTCGTGTTGATGATTGTGATGGATCGATTGACCGGCCT
GACGCGCCGGATGAGTATGTGA

Upstream 100 bases:

>100_bases
ACTGGCCCTTTGCCGCCGTGGCATCGGTTACACTGCTGGTTGCTGTGCTCAGCGGCGTGATGCTGTTTTCCCTGCTTGGT
CGTTTTGCGAGGATAGACTG

Downstream 100 bases:

>100_bases
GGCCCAGATGACTTACCCCCGAGATTTTGTTGGCTATGGCGCCAACCCGCCGGATCCGAAATGGCCAAATGGCGCGCGTG
TCGCTATCAATTTTGTGATG

Product: ABC transporter, permease protein, putative

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAHRSTVSDRSYSIVMGGLAALGILILVGPVIIVLLTSFTSSRVLTFPPPGFSLEWYAALFDPVKSGHIHSALANSLYVA
AIATALAVLLATAAALAMARSRGASARALEASFMSPLILPGLSFGLAALMFFSILGFRPSINHLIAGHLVVIAPFVFRTT
LASLSQFNPALLESSASLGAGRFYAFRRITLPIITPGIVAGGFLAFVASMDNVPVSLFLSNARTNMLPIRMWGMMETTLD
VRVAAISGVIIIAVLVLMIVMDRLTGLTRRMSM

Sequences:

>Translated_273_residues
MAHRSTVSDRSYSIVMGGLAALGILILVGPVIIVLLTSFTSSRVLTFPPPGFSLEWYAALFDPVKSGHIHSALANSLYVA
AIATALAVLLATAAALAMARSRGASARALEASFMSPLILPGLSFGLAALMFFSILGFRPSINHLIAGHLVVIAPFVFRTT
LASLSQFNPALLESSASLGAGRFYAFRRITLPIITPGIVAGGFLAFVASMDNVPVSLFLSNARTNMLPIRMWGMMETTLD
VRVAAISGVIIIAVLVLMIVMDRLTGLTRRMSM
>Mature_272_residues
AHRSTVSDRSYSIVMGGLAALGILILVGPVIIVLLTSFTSSRVLTFPPPGFSLEWYAALFDPVKSGHIHSALANSLYVAA
IATALAVLLATAAALAMARSRGASARALEASFMSPLILPGLSFGLAALMFFSILGFRPSINHLIAGHLVVIAPFVFRTTL
ASLSQFNPALLESSASLGAGRFYAFRRITLPIITPGIVAGGFLAFVASMDNVPVSLFLSNARTNMLPIRMWGMMETTLDV
RVAAISGVIIIAVLVLMIVMDRLTGLTRRMSM

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=224, Percent_Identity=28.125, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787714, Length=239, Percent_Identity=30.1255230125523, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787081, Length=241, Percent_Identity=27.8008298755187, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28939; Mature: 28808

Theoretical pI: Translated: 11.86; Mature: 11.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHRSTVSDRSYSIVMGGLAALGILILVGPVIIVLLTSFTSSRVLTFPPPGFSLEWYAAL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
FDPVKSGHIHSALANSLYVAAIATALAVLLATAAALAMARSRGASARALEASFMSPLILP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHC
GLSFGLAALMFFSILGFRPSINHLIAGHLVVIAPFVFRTTLASLSQFNPALLESSASLGA
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
GRFYAFRRITLPIITPGIVAGGFLAFVASMDNVPVSLFLSNARTNMLPIRMWGMMETTLD
HHHHHHHEEEHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEHHHHHHHHHHH
VRVAAISGVIIIAVLVLMIVMDRLTGLTRRMSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AHRSTVSDRSYSIVMGGLAALGILILVGPVIIVLLTSFTSSRVLTFPPPGFSLEWYAAL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
FDPVKSGHIHSALANSLYVAAIATALAVLLATAAALAMARSRGASARALEASFMSPLILP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHC
GLSFGLAALMFFSILGFRPSINHLIAGHLVVIAPFVFRTTLASLSQFNPALLESSASLGA
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
GRFYAFRRITLPIITPGIVAGGFLAFVASMDNVPVSLFLSNARTNMLPIRMWGMMETTLD
HHHHHHHEEEHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEHHHHHHHHHHH
VRVAAISGVIIIAVLVLMIVMDRLTGLTRRMSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]