| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is rbsA [H]
Identifier: 110679631
GI number: 110679631
Start: 2271627
End: 2273144
Strand: Reverse
Name: rbsA [H]
Synonym: RD1_2382
Alternate gene names: 110679631
Gene position: 2273144-2271627 (Counterclockwise)
Preceding gene: 110679635
Following gene: 110679630
Centisome position: 55.0
GC content: 62.19
Gene sequence:
>1518_bases GTGGCTCGCGACGCGCTCAAGGTGAACGGTCTGCAGAAATCGTTCGGCAAAAATAATGTGTTACGCGGCATTGACCTGAC CCTGTCACCGGGGTCCGTGACGGTTCTGATGGGGGCGAATGGCGCCGGGAAATCCACACTGGTCAAGGTGATCTGCGGCC ATCACCGCGCGGATGGTGGCACGGTGATGCTGACCGGCGCGCCCTTTGATCCTGTGGACGAGGCGGACGCCATCCGCAAA GGGGTGGTGACGGTGCACCAATCCATCAATGATGGGGTCATTCCCGATCTGGACGTGGCCAACAACCTGATGCTGGACCG TTTGGTCGAACGCGGCCACGGGTTTTTCGTCCGCGAACGCCACCTGCGCGCCGAGGCCGCCAAAGTCGCCGCCGCCATGG GCATTCATGTCGATCTGCGCGCACGGGTATCAGATCTGTCGGTTGCCGACCGCCAGATGATCGCCATCGCAAGGGCCATG GCGCGCGCGCCCAAAGTGCTGATCCTGGACGAGCCGACCTCCTCGCTTTCGGCGTCAGAGGCGGAGCGGCTCTTTGATCT GATTGACCGGCTACGCGCGCAAGGTGTCGCGATCCTGTATATCTCGCACCGCATGTCCGATATCCGGCGCATTGCGGACC GGATCGTGGTGATGCGGGACGGCGCGATTTCCGGCCTGTTCGAAAGCGCGCCGCTTGATTACAACGCCGCCGTCACCGCC ATGCTCGGCCACCGCATGACGGATGTGGATGTCACCGTTCAAACCGGGGCCGCCCCGGTGCTGGACTTGTCCGATCTGTG CCTCTCTGACGGGACAGACCCTTTCAATCTGACCGTGCGGGACGGGGAGGTCGTCGCACTCGTGGGCCTTCTGGGCAGCG GCAAAAGCCGGTTGGCCGATATCCTTTTTGGCATCTCACAGCCCGCGCAGGGCCAGATGCGCATCAACGGGACCCCCTAC ACCCCCCGTTCGGTTGAGGATGCTGTGGCACAGGGCGTGTTCATGTCGCCGAAGGATCGCAGCAGCAATGCAGTGATCCC GGCCTTTGACATCGCCGATAACATGACCCTGCCCTTTCTGCGCAGCCTCAGTACCGGGCCGTTCCTGAAATCACGCGCAC AGCGCAAAAGCACCGACCGCATGGTGGATCAGTTGGGCATTGTCTGCCAATCGTCACATGACGGCATTGGCACCCTGTCG GGCGGCAACCAGCAAAAGGTCATGATCGCGCGCTGGCTGCTGGAGCCTGCGAAGGTGCTCTTGCTGGATGAGCCGTTTCA GGGCGTGGACATCGGTGCGCGGCGCGATATCGGGCGGCATATCCGCGGCACGGCGAAAGGGCGCGCGACACTGGTGTTTC TCGCCGAGATCGACGAAGCACTTGAGATCGCCGACCGTATTCTCGTGATGCACGAGGGCACCCTTGTCGGCGAACATGTG AACAAGGATGTCGACCTTGCCGCGCTCATCGCAGACGTCACCGGAAGAACATCAAAGGCAACAGGCATATCCGCATGA
Upstream 100 bases:
>100_bases TTTGCCTCAATGACATACTTGGCGGTTTATACTTATGTCAAACTGTTTGACAAAAGTATTTCACCCTGCCTATCGTCAGA CCACCAAGGGGAGGAAGTGA
Downstream 100 bases:
>100_bases ACGACCGCATCCTCGACTTTGCCATTCGGTATGGCTTTTTGATCCTTCTTGTCGGGCTGATCGTCTATTTCAGCCTCGCC GCACCGGGGTTTTTTGGCCC
Product: sugar uptake ABC transporter ATP-binding protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MARDALKVNGLQKSFGKNNVLRGIDLTLSPGSVTVLMGANGAGKSTLVKVICGHHRADGGTVMLTGAPFDPVDEADAIRK GVVTVHQSINDGVIPDLDVANNLMLDRLVERGHGFFVRERHLRAEAAKVAAAMGIHVDLRARVSDLSVADRQMIAIARAM ARAPKVLILDEPTSSLSASEAERLFDLIDRLRAQGVAILYISHRMSDIRRIADRIVVMRDGAISGLFESAPLDYNAAVTA MLGHRMTDVDVTVQTGAAPVLDLSDLCLSDGTDPFNLTVRDGEVVALVGLLGSGKSRLADILFGISQPAQGQMRINGTPY TPRSVEDAVAQGVFMSPKDRSSNAVIPAFDIADNMTLPFLRSLSTGPFLKSRAQRKSTDRMVDQLGIVCQSSHDGIGTLS GGNQQKVMIARWLLEPAKVLLLDEPFQGVDIGARRDIGRHIRGTAKGRATLVFLAEIDEALEIADRILVMHEGTLVGEHV NKDVDLAALIADVTGRTSKATGISA
Sequences:
>Translated_505_residues MARDALKVNGLQKSFGKNNVLRGIDLTLSPGSVTVLMGANGAGKSTLVKVICGHHRADGGTVMLTGAPFDPVDEADAIRK GVVTVHQSINDGVIPDLDVANNLMLDRLVERGHGFFVRERHLRAEAAKVAAAMGIHVDLRARVSDLSVADRQMIAIARAM ARAPKVLILDEPTSSLSASEAERLFDLIDRLRAQGVAILYISHRMSDIRRIADRIVVMRDGAISGLFESAPLDYNAAVTA MLGHRMTDVDVTVQTGAAPVLDLSDLCLSDGTDPFNLTVRDGEVVALVGLLGSGKSRLADILFGISQPAQGQMRINGTPY TPRSVEDAVAQGVFMSPKDRSSNAVIPAFDIADNMTLPFLRSLSTGPFLKSRAQRKSTDRMVDQLGIVCQSSHDGIGTLS GGNQQKVMIARWLLEPAKVLLLDEPFQGVDIGARRDIGRHIRGTAKGRATLVFLAEIDEALEIADRILVMHEGTLVGEHV NKDVDLAALIADVTGRTSKATGISA >Mature_504_residues ARDALKVNGLQKSFGKNNVLRGIDLTLSPGSVTVLMGANGAGKSTLVKVICGHHRADGGTVMLTGAPFDPVDEADAIRKG VVTVHQSINDGVIPDLDVANNLMLDRLVERGHGFFVRERHLRAEAAKVAAAMGIHVDLRARVSDLSVADRQMIAIARAMA RAPKVLILDEPTSSLSASEAERLFDLIDRLRAQGVAILYISHRMSDIRRIADRIVVMRDGAISGLFESAPLDYNAAVTAM LGHRMTDVDVTVQTGAAPVLDLSDLCLSDGTDPFNLTVRDGEVVALVGLLGSGKSRLADILFGISQPAQGQMRINGTPYT PRSVEDAVAQGVFMSPKDRSSNAVIPAFDIADNMTLPFLRSLSTGPFLKSRAQRKSTDRMVDQLGIVCQSSHDGIGTLSG GNQQKVMIARWLLEPAKVLLLDEPFQGVDIGARRDIGRHIRGTAKGRATLVFLAEIDEALEIADRILVMHEGTLVGEHVN KDVDLAALIADVTGRTSKATGISA
Specific function: Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI73747915, Length=227, Percent_Identity=30.3964757709251, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI9955968, Length=214, Percent_Identity=31.3084112149533, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI9955966, Length=214, Percent_Identity=31.3084112149533, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI45243524, Length=214, Percent_Identity=31.3084112149533, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI21536376, Length=228, Percent_Identity=27.1929824561404, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI156105685, Length=206, Percent_Identity=33.0097087378641, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI116734710, Length=228, Percent_Identity=27.1929824561404, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI9665248, Length=218, Percent_Identity=29.3577981651376, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI27262624, Length=232, Percent_Identity=24.1379310344828, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI27262626, Length=232, Percent_Identity=24.1379310344828, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI4505771, Length=218, Percent_Identity=30.2752293577982, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI9961252, Length=218, Percent_Identity=30.2752293577982, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI105990541, Length=215, Percent_Identity=28.8372093023256, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI46592964, Length=213, Percent_Identity=29.1079812206573, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI46592971, Length=213, Percent_Identity=29.1079812206573, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI46592978, Length=213, Percent_Identity=29.1079812206573, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI46592956, Length=213, Percent_Identity=29.1079812206573, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI46592898, Length=213, Percent_Identity=29.1079812206573, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI46592915, Length=213, Percent_Identity=29.1079812206573, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI255708477, Length=213, Percent_Identity=30.5164319248826, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI27881501, Length=219, Percent_Identity=23.7442922374429, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI30795238, Length=219, Percent_Identity=23.7442922374429, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI73747917, Length=191, Percent_Identity=30.3664921465969, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI9961250, Length=222, Percent_Identity=29.2792792792793, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI42741659, Length=218, Percent_Identity=28.8990825688073, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI47078218, Length=203, Percent_Identity=29.5566502463054, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI45446740, Length=203, Percent_Identity=29.5566502463054, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI9955963, Length=208, Percent_Identity=29.8076923076923, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI171184400, Length=213, Percent_Identity=29.5774647887324, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI27436953, Length=233, Percent_Identity=24.0343347639485, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI31657092, Length=218, Percent_Identity=24.3119266055046, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI148612844, Length=217, Percent_Identity=28.110599078341, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI42490749, Length=205, Percent_Identity=26.3414634146341, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI11967971, Length=214, Percent_Identity=28.9719626168224, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI48995001, Length=488, Percent_Identity=36.6803278688525, Blast_Score=304, Evalue=1e-83, Organism=Escherichia coli, GI1790525, Length=507, Percent_Identity=34.5167652859961, Blast_Score=291, Evalue=7e-80, Organism=Escherichia coli, GI1790190, Length=497, Percent_Identity=34.20523138833, Blast_Score=286, Evalue=2e-78, Organism=Escherichia coli, GI1788210, Length=484, Percent_Identity=35.3305785123967, Blast_Score=279, Evalue=3e-76, Organism=Escherichia coli, GI1788897, Length=486, Percent_Identity=34.5679012345679, Blast_Score=270, Evalue=2e-73, Organism=Escherichia coli, GI1788472, Length=478, Percent_Identity=33.2635983263598, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI1789991, Length=496, Percent_Identity=32.258064516129, Blast_Score=261, Evalue=6e-71, Organism=Escherichia coli, GI1787792, Length=479, Percent_Identity=34.446764091858, Blast_Score=250, Evalue=2e-67, Organism=Escherichia coli, GI1789864, Length=233, Percent_Identity=30.4721030042918, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1789672, Length=244, Percent_Identity=27.4590163934426, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI87082268, Length=225, Percent_Identity=29.3333333333333, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1787029, Length=224, Percent_Identity=29.4642857142857, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1788225, Length=226, Percent_Identity=29.2035398230088, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI48994943, Length=502, Percent_Identity=22.9083665338645, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI87081834, Length=232, Percent_Identity=26.7241379310345, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1787712, Length=222, Percent_Identity=25.6756756756757, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI87081709, Length=271, Percent_Identity=26.9372693726937, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1787370, Length=220, Percent_Identity=27.2727272727273, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1790739, Length=226, Percent_Identity=29.2035398230088, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI87081791, Length=224, Percent_Identity=27.6785714285714, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1789873, Length=216, Percent_Identity=28.2407407407407, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1786563, Length=231, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1787089, Length=224, Percent_Identity=29.0178571428571, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788761, Length=228, Percent_Identity=27.1929824561404, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI87082267, Length=221, Percent_Identity=30.316742081448, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1788506, Length=313, Percent_Identity=25.8785942492013, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1786654, Length=204, Percent_Identity=30.8823529411765, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1787758, Length=222, Percent_Identity=29.7297297297297, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1789891, Length=241, Percent_Identity=30.7053941908714, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1786398, Length=225, Percent_Identity=27.5555555555556, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI48994997, Length=255, Percent_Identity=29.0196078431373, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1786703, Length=235, Percent_Identity=30.2127659574468, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1788644, Length=246, Percent_Identity=27.2357723577236, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1787143, Length=212, Percent_Identity=34.4339622641509, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1786253, Length=218, Percent_Identity=28.4403669724771, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786872, Length=230, Percent_Identity=26.9565217391304, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1788165, Length=209, Percent_Identity=28.7081339712919, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1790467, Length=221, Percent_Identity=27.1493212669683, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1788450, Length=222, Percent_Identity=27.9279279279279, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1790544, Length=247, Percent_Identity=28.7449392712551, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI87081782, Length=233, Percent_Identity=26.6094420600858, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1786319, Length=224, Percent_Identity=27.2321428571429, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1789032, Length=228, Percent_Identity=28.9473684210526, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1787500, Length=221, Percent_Identity=27.1493212669683, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI145693107, Length=311, Percent_Identity=27.6527331189711, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1787105, Length=209, Percent_Identity=26.7942583732057, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787547, Length=231, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1787164, Length=224, Percent_Identity=26.3392857142857, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1786803, Length=224, Percent_Identity=26.7857142857143, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786345, Length=211, Percent_Identity=28.436018957346, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI2367384, Length=239, Percent_Identity=26.7782426778243, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789962, Length=207, Percent_Identity=28.5024154589372, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786981, Length=205, Percent_Identity=27.8048780487805, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1787759, Length=240, Percent_Identity=27.5, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1787112, Length=223, Percent_Identity=25.1121076233184, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17567265, Length=213, Percent_Identity=33.8028169014084, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71992290, Length=237, Percent_Identity=27.0042194092827, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI193211015, Length=208, Percent_Identity=29.8076923076923, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI71996809, Length=208, Percent_Identity=30.2884615384615, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI193211017, Length=208, Percent_Identity=30.2884615384615, Blast_Score=82, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17565938, Length=220, Percent_Identity=31.3636363636364, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17558664, Length=211, Percent_Identity=29.8578199052133, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17541710, Length=210, Percent_Identity=30, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193209708, Length=233, Percent_Identity=29.6137339055794, Blast_Score=79, Evalue=6e-15, Organism=Caenorhabditis elegans, GI25146777, Length=206, Percent_Identity=28.1553398058252, Blast_Score=79, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17511077, Length=216, Percent_Identity=28.2407407407407, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71984940, Length=220, Percent_Identity=30.9090909090909, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17569145, Length=206, Percent_Identity=29.126213592233, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17569143, Length=220, Percent_Identity=29.5454545454545, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17543740, Length=215, Percent_Identity=29.7674418604651, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193202349, Length=222, Percent_Identity=32.4324324324324, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI115535101, Length=213, Percent_Identity=31.4553990610329, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533608, Length=248, Percent_Identity=25.4032258064516, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17565586, Length=217, Percent_Identity=23.963133640553, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17533971, Length=219, Percent_Identity=29.2237442922374, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17567269, Length=213, Percent_Identity=29.5774647887324, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI212646699, Length=212, Percent_Identity=28.3018867924528, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71983516, Length=229, Percent_Identity=24.8908296943231, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71983510, Length=229, Percent_Identity=24.8908296943231, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71983523, Length=229, Percent_Identity=24.8908296943231, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115534520, Length=219, Percent_Identity=27.8538812785388, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17510237, Length=238, Percent_Identity=23.109243697479, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI86564969, Length=211, Percent_Identity=27.9620853080569, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI25146765, Length=211, Percent_Identity=27.9620853080569, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71992070, Length=211, Percent_Identity=27.9620853080569, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71992066, Length=211, Percent_Identity=27.9620853080569, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6321081, Length=238, Percent_Identity=24.7899159663866, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322980, Length=237, Percent_Identity=23.6286919831224, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321752, Length=221, Percent_Identity=26.2443438914027, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI24666092, Length=225, Percent_Identity=28.4444444444444, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI116007184, Length=214, Percent_Identity=28.9719626168224, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI221500365, Length=211, Percent_Identity=29.3838862559242, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24643674, Length=225, Percent_Identity=28, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI221512771, Length=226, Percent_Identity=26.5486725663717, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI281363262, Length=214, Percent_Identity=31.3084112149533, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24653245, Length=214, Percent_Identity=31.3084112149533, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24648314, Length=224, Percent_Identity=24.1071428571429, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24641565, Length=204, Percent_Identity=29.9019607843137, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI24659289, Length=217, Percent_Identity=29.9539170506912, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI23397593, Length=211, Percent_Identity=30.3317535545024, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI19920532, Length=217, Percent_Identity=27.1889400921659, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24580930, Length=217, Percent_Identity=27.1889400921659, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI17136662, Length=208, Percent_Identity=27.8846153846154, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI45550390, Length=235, Percent_Identity=25.9574468085106, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI28573571, Length=226, Percent_Identity=22.1238938053097, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI17136592, Length=249, Percent_Identity=25.3012048192771, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI28573573, Length=221, Percent_Identity=22.6244343891403, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28571871, Length=209, Percent_Identity=30.1435406698565, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI21357907, Length=213, Percent_Identity=26.7605633802817, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI85726357, Length=218, Percent_Identity=25.6880733944954, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI28574150, Length=266, Percent_Identity=23.3082706766917, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007328, Length=266, Percent_Identity=23.3082706766917, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI221500419, Length=219, Percent_Identity=23.2876712328767, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015861 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.17 [H]
Molecular weight: Translated: 54005; Mature: 53874
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDALKVNGLQKSFGKNNVLRGIDLTLSPGSVTVLMGANGAGKSTLVKVICGHHRADGG CCCCCHHHCCHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC TVMLTGAPFDPVDEADAIRKGVVTVHQSINDGVIPDLDVANNLMLDRLVERGHGFFVRER EEEEECCCCCCCCHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHH HLRAEAAKVAAAMGIHVDLRARVSDLSVADRQMIAIARAMARAPKVLILDEPTSSLSASE HHHHHHHHHHHHHCCEEEEEHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHH AERLFDLIDRLRAQGVAILYISHRMSDIRRIADRIVVMRDGAISGLFESAPLDYNAAVTA HHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCCCCHHHHH MLGHRMTDVDVTVQTGAAPVLDLSDLCLSDGTDPFNLTVRDGEVVALVGLLGSGKSRLAD HHCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCHHHHHH ILFGISQPAQGQMRINGTPYTPRSVEDAVAQGVFMSPKDRSSNAVIPAFDIADNMTLPFL HHHCCCCCCCCCEEECCCCCCCCCHHHHHHCCCEECCCCCCCCEEEEEECCCCCCCHHHH RSLSTGPFLKSRAQRKSTDRMVDQLGIVCQSSHDGIGTLSGGNQQKVMIARWLLEPAKVL HHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEECCCCCCCHHHHHHHHHCCCEEE LLDEPFQGVDIGARRDIGRHIRGTAKGRATLVFLAEIDEALEIADRILVMHEGTLVGEHV EEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHEEEEECCEEEHHHC NKDVDLAALIADVTGRTSKATGISA CCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ARDALKVNGLQKSFGKNNVLRGIDLTLSPGSVTVLMGANGAGKSTLVKVICGHHRADGG CCCCHHHCCHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC TVMLTGAPFDPVDEADAIRKGVVTVHQSINDGVIPDLDVANNLMLDRLVERGHGFFVRER EEEEECCCCCCCCHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHH HLRAEAAKVAAAMGIHVDLRARVSDLSVADRQMIAIARAMARAPKVLILDEPTSSLSASE HHHHHHHHHHHHHCCEEEEEHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHH AERLFDLIDRLRAQGVAILYISHRMSDIRRIADRIVVMRDGAISGLFESAPLDYNAAVTA HHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCCCCHHHHH MLGHRMTDVDVTVQTGAAPVLDLSDLCLSDGTDPFNLTVRDGEVVALVGLLGSGKSRLAD HHCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCHHHHHH ILFGISQPAQGQMRINGTPYTPRSVEDAVAQGVFMSPKDRSSNAVIPAFDIADNMTLPFL HHHCCCCCCCCCEEECCCCCCCCCHHHHHHCCCEECCCCCCCCEEEEEECCCCCCCHHHH RSLSTGPFLKSRAQRKSTDRMVDQLGIVCQSSHDGIGTLSGGNQQKVMIARWLLEPAKVL HHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEECCCCCCCHHHHHHHHHCCCEEE LLDEPFQGVDIGARRDIGRHIRGTAKGRATLVFLAEIDEALEIADRILVMHEGTLVGEHV EEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHEEEEECCEEEHHHC NKDVDLAALIADVTGRTSKATGISA CCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA