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The map label for this gene is van [H]

Identifier: 110679615

GI number: 110679615

Start: 2256542

End: 2257612

Strand: Reverse

Name: van [H]

Synonym: RD1_2360

Alternate gene names: 110679615

Gene position: 2257612-2256542 (Counterclockwise)

Preceding gene: 110679616

Following gene: 110679614

Centisome position: 54.62

GC content: 58.64

Gene sequence:

>1071_bases
ATGACGACACTGGTGCGTAACGCGTGGTATGTGGCTGCCTGGTCTAGCGAAATTGATGACGCGCTGAGGCGGTTTGTCAT
TTTGGGTGATCCGGTCTTGCTGTTCCGCCGCACGGATGGGCGTGTCGCAGCGCTTGAAGACGTCTGCCCGCATCGCCAAC
TGCCGCTGAGCATGGGCAAGCGGATCGGCGATACGGTGCAGTGTGGGTATCACGGGCTGACCTTTGATACGGATGGAAAA
TGCGTGCGCGTGCCCGGACAGGACCGCATCCCGCCGTCCGCCTGTGTTGATGCCTATCCCACCGAAGAACGCAGCGGCAT
CGTCTGGATCTGGATGGGAGAGCCGGAACGCGCCAATCCCGACGACATTTTTGATCTGCCCCAGTTCCATGATGACAGCT
GGCACATGCACCACGGCGGTGCGCTGCATATCAAATCCAACTACCTGAATGTGGCCGAAAACCTCGTTGATCCTGCGCAT
GTGAGCTTTGTGCATGAAACAACGCTGGGCAATTCGGCTTCCGAAAACGTGCCCGTACATGTTTCGACGAGCGGCGAAGA
GATCATCGCATGGCGCTGGATACGCAATTCCGAGCCGATCGGTTTTTTCAAGGCCTTCGGCAATTTCACCGGCAATGTGG
ACCGCTGGCACTACTATCACCTGCGCCTGCCCTGCACCGCTTATATCGACTTTGGCTCTGCCGACGCGACCCGTCAGATC
GCAGAGGACGACCGCGACAGCGGCACCCGTATTCTTGCCCTGCATTTCATGACGCCGGTGACGGAAACCTATACGATTGA
CCGCTGGATGCACCTGCGCAATACCGCCGTGGGCTCTGATGAGGCCTCCGACAAGATGGACGCGATGTTCGAGATTGCCT
TTGGCGAAGACAAGGAGATCCTTGAAGCCGTTCACATGGAAGAACAGCGCCCGCGCAAGCGACGACCGATCCGCCTCGCG
ATTGATCACGGGCCCATGGTCTACCGCAAACGTATCGCCGAGATGCTGGAGCGCGAGCGCACGGATGATGCATCGGCACC
ACCCGATGGCTCCTACATCATCCACAGTTAG

Upstream 100 bases:

>100_bases
TGCTGCAGGCCGGACACGCCAAGATTTATGGTTGACGCATCCTGCACCGGCCATAATACTTAGCGTACAAACTATATAGG
CTTGCAACGGGGATGAATCC

Downstream 100 bases:

>100_bases
CGGCATACGCAGGCGTGTGGTATAAATCGCAGTGATTGCACCTCGATGTCGCTTTAGGGCGTTGCCTATACCCCCTGCGC
AAAAGACACAGGACGCACGG

Product: vanillate O-demethylase oxygenase, putative

Products: NA

Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MTTLVRNAWYVAAWSSEIDDALRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGKRIGDTVQCGYHGLTFDTDGK
CVRVPGQDRIPPSACVDAYPTEERSGIVWIWMGEPERANPDDIFDLPQFHDDSWHMHHGGALHIKSNYLNVAENLVDPAH
VSFVHETTLGNSASENVPVHVSTSGEEIIAWRWIRNSEPIGFFKAFGNFTGNVDRWHYYHLRLPCTAYIDFGSADATRQI
AEDDRDSGTRILALHFMTPVTETYTIDRWMHLRNTAVGSDEASDKMDAMFEIAFGEDKEILEAVHMEEQRPRKRRPIRLA
IDHGPMVYRKRIAEMLERERTDDASAPPDGSYIIHS

Sequences:

>Translated_356_residues
MTTLVRNAWYVAAWSSEIDDALRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGKRIGDTVQCGYHGLTFDTDGK
CVRVPGQDRIPPSACVDAYPTEERSGIVWIWMGEPERANPDDIFDLPQFHDDSWHMHHGGALHIKSNYLNVAENLVDPAH
VSFVHETTLGNSASENVPVHVSTSGEEIIAWRWIRNSEPIGFFKAFGNFTGNVDRWHYYHLRLPCTAYIDFGSADATRQI
AEDDRDSGTRILALHFMTPVTETYTIDRWMHLRNTAVGSDEASDKMDAMFEIAFGEDKEILEAVHMEEQRPRKRRPIRLA
IDHGPMVYRKRIAEMLERERTDDASAPPDGSYIIHS
>Mature_355_residues
TTLVRNAWYVAAWSSEIDDALRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGKRIGDTVQCGYHGLTFDTDGKC
VRVPGQDRIPPSACVDAYPTEERSGIVWIWMGEPERANPDDIFDLPQFHDDSWHMHHGGALHIKSNYLNVAENLVDPAHV
SFVHETTLGNSASENVPVHVSTSGEEIIAWRWIRNSEPIGFFKAFGNFTGNVDRWHYYHLRLPCTAYIDFGSADATRQIA
EDDRDSGTRILALHFMTPVTETYTIDRWMHLRNTAVGSDEASDKMDAMFEIAFGEDKEILEAVHMEEQRPRKRRPIRLAI
DHGPMVYRKRIAEMLERERTDDASAPPDGSYIIHS

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71983709, Length=176, Percent_Identity=27.8409090909091, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI161085896, Length=171, Percent_Identity=26.9005847953216, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: =1.14.13.82 [H]

Molecular weight: Translated: 40530; Mature: 40399

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLVRNAWYVAAWSSEIDDALRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGK
CCEEEECCEEEEEECHHHHHHHHHEEEECCEEEEEEECCCCEEEHHHHCCCCCCCHHHHH
RIGDTVQCGYHGLTFDTDGKCVRVPGQDRIPPSACVDAYPTEERSGIVWIWMGEPERANP
HCCCEEECCCCCEEECCCCCEEECCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCC
DDIFDLPQFHDDSWHMHHGGALHIKSNYLNVAENLVDPAHVSFVHETTLGNSASENVPVH
CCCCCCCCCCCCCEEEECCCEEEEECCHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCEE
VSTSGEEIIAWRWIRNSEPIGFFKAFGNFTGNVDRWHYYHLRLPCTAYIDFGSADATRQI
EECCCCEEEEEEEECCCCCCCHHHHHCCCCCCCCCEEEEEEEECEEEEEECCCCCHHHHH
AEDDRDSGTRILALHFMTPVTETYTIDRWMHLRNTAVGSDEASDKMDAMFEIAFGEDKEI
HHCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCHHCEEEEEECCCCHHH
LEAVHMEEQRPRKRRPIRLAIDHGPMVYRKRIAEMLERERTDDASAPPDGSYIIHS
HHHHHHHHHCHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC
>Mature Secondary Structure 
TTLVRNAWYVAAWSSEIDDALRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGK
CEEEECCEEEEEECHHHHHHHHHEEEECCEEEEEEECCCCEEEHHHHCCCCCCCHHHHH
RIGDTVQCGYHGLTFDTDGKCVRVPGQDRIPPSACVDAYPTEERSGIVWIWMGEPERANP
HCCCEEECCCCCEEECCCCCEEECCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCC
DDIFDLPQFHDDSWHMHHGGALHIKSNYLNVAENLVDPAHVSFVHETTLGNSASENVPVH
CCCCCCCCCCCCCEEEECCCEEEEECCHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCEE
VSTSGEEIIAWRWIRNSEPIGFFKAFGNFTGNVDRWHYYHLRLPCTAYIDFGSADATRQI
EECCCCEEEEEEEECCCCCCCHHHHHCCCCCCCCCEEEEEEEECEEEEEECCCCCHHHHH
AEDDRDSGTRILALHFMTPVTETYTIDRWMHLRNTAVGSDEASDKMDAMFEIAFGEDKEI
HHCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCHHCEEEEEECCCCHHH
LEAVHMEEQRPRKRRPIRLAIDHGPMVYRKRIAEMLERERTDDASAPPDGSYIIHS
HHHHHHHHHCHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9098058 [H]