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The map label for this gene is cdd [C]

Identifier: 110679616

GI number: 110679616

Start: 2257808

End: 2258251

Strand: Reverse

Name: cdd [C]

Synonym: RD1_2362

Alternate gene names: 110679616

Gene position: 2258251-2257808 (Counterclockwise)

Preceding gene: 110679617

Following gene: 110679615

Centisome position: 54.64

GC content: 57.43

Gene sequence:

>444_bases
ATGAATGACGTCGATATCCGCATGCTGCGCATCGCCTATGACGAGGCGAAAGCCGGTTTTGACGAAGGCGGCTGCCCCAT
CGGCTCAGTGCTGGCGCGCGGTGGCGAGGTCGTGGCACAGGGCCGCAATCAAAGGGTGCAAAAGGGCGATCCGATTGCTC
ATGGGGAGATGGATGCACTGCGCAAGGCGGGCCGTCAAAAGAGCTATCGCGACACGACGCTTTATACCTCGCTCAGCCCC
TGCATGATGTGTACGGGCACGATCATTCAATTCGGCATTCCGCGTGTTGTCATTGGCGAAAACAGGAATTTTGGTGGCAA
TGAGGACTTTCTGCGCTCCAAGGGGGTTGAGGTCATCGTGGCCGATGATCCAGATTGCATCGCCCTGATGCAGCGCTTCA
TCCGCGAAAAACCCGACCTTTGGGCCGAGGATATTGCCGAATAG

Upstream 100 bases:

>100_bases
ATCATATGGACACATTGCAACGGGATGGCATCTGGCACCCAAGTGTCGAGACGCTGCCCTATTATCAAGGGCCGGTTTTG
GGTCAAAAGGAATGACAGAT

Downstream 100 bases:

>100_bases
GCAGTGAACCAAAACAATCGGTTTCGGGTATCGGGCAAATTGGCAGATCGCCATTGATCTGTCTGTTGGCGCGCCTCAAC
CCGTTCAGTGCAACCTGCTG

Product: cytosine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNDVDIRMLRIAYDEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDALRKAGRQKSYRDTTLYTSLSP
CMMCTGTIIQFGIPRVVIGENRNFGGNEDFLRSKGVEVIVADDPDCIALMQRFIREKPDLWAEDIAE

Sequences:

>Translated_147_residues
MNDVDIRMLRIAYDEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDALRKAGRQKSYRDTTLYTSLSP
CMMCTGTIIQFGIPRVVIGENRNFGGNEDFLRSKGVEVIVADDPDCIALMQRFIREKPDLWAEDIAE
>Mature_147_residues
MNDVDIRMLRIAYDEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDALRKAGRQKSYRDTTLYTSLSP
CMMCTGTIIQFGIPRVVIGENRNFGGNEDFLRSKGVEVIVADDPDCIALMQRFIREKPDLWAEDIAE

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=141, Percent_Identity=37.5886524822695, Blast_Score=81, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17541138, Length=109, Percent_Identity=35.7798165137615, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17554608, Length=120, Percent_Identity=31.6666666666667, Blast_Score=63, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6325319, Length=148, Percent_Identity=50.6756756756757, Blast_Score=147, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 16237; Mature: 16237

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDVDIRMLRIAYDEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDAL
CCCCCEEEEEEEHHHHHCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHH
RKAGRQKSYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIGENRNFGGNEDFLRSKGVEVIV
HHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCEEEE
ADDPDCIALMQRFIREKPDLWAEDIAE
ECCCHHHHHHHHHHHCCCCCCHHHHCC
>Mature Secondary Structure
MNDVDIRMLRIAYDEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDAL
CCCCCEEEEEEEHHHHHCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHH
RKAGRQKSYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIGENRNFGGNEDFLRSKGVEVIV
HHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCEEEE
ADDPDCIALMQRFIREKPDLWAEDIAE
ECCCHHHHHHHHHHHCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]