Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is tauC [C]

Identifier: 110679597

GI number: 110679597

Start: 2240339

End: 2241871

Strand: Reverse

Name: tauC [C]

Synonym: RD1_2342

Alternate gene names: 110679597

Gene position: 2241871-2240339 (Counterclockwise)

Preceding gene: 110679598

Following gene: 110679596

Centisome position: 54.24

GC content: 63.6

Gene sequence:

>1533_bases
ATGTCCATTCGGCGCGGCACAATCGCAGCGGTTGTGCTGCTGGGTCTTTGGGAAGGGGCGGCGCAGGTCCTTTCGGATGG
CGTGTTATTCGTCGGCCCCCTCGGGATCCTGTTCCATATCGGCGCAAACCCCGGTCTTTTGGTCCGCGCCACGGCCACCA
CGACCCAGAATGCCGCGCTCGGGTTCCTCTGGGGAAACCTTGCTGCCGTCCTCATGGCCAGTGTCGTGGTTGTGCTGCCG
CGCACGGAGCGGGTGATTTCCTCTGCCGCCCTTGTGGTGTTCTGCCTGCCGCTTGTGGCAACCGGGCCGATCCTGCGCGT
CATTTCAGGCCCCGGCGATACGCCACAGATCGCCCTCGCAGCGCTGGCGGTCTATTACACGACATTCCTTGCAATGCGTG
TGGGGTTGCGTGCGATGCCGGCCAACTGGTCCGACCTGATGTCTGTTTACGGGCGGGGGGCCCTGGCGACCCTTCTCACC
GTGCGTGCACGCGCCAGCCTGCCCTATTTGTTTGTCGGCCTGCAGATCGCGGCCCCCGCCGCCTTTCTCGGCGCGATGAT
CGGAGAGTTCACGGGCGCCGAACGCGGCCTTGGCGTGCTGACGCTGCGGGCGATGCGCAGCTTGGATGTCGAGGCCACAT
GGTCACTTGCGGTGATTTCCGCCGCCATGGCGATGCTGCTTTATGCACTGGTGGGAGCAGCGGGGCGTTGGCTTGTCGGA
TACACCCCTGACATCATCCTGTCCCCGCCCCGCACGATGGCGCACAACCGCTGGACGGGGATGCTTCAGGCATGTGGCGC
GGCACTGCTGTTGATCCTGCTGTGGCAGATCAGCATGGATCTGGCAGACCTCAACCGTTTCTTTGCAAAACGCCCAGCAG
ATGTGCTGAGCTATCTGCTTGCCGATGCCCCGGCCCGCGCCACATTGCTGCGCGCGCTGGCAGAGACAACGGCGACCACG
ATCCCCGGTTATCTTGCCGGGCTGGTGCTGGGGGCCGCACTTGCGATGGGCGTCATCCTTCTTCCCAGGGCCTCAGGTGT
CGTTTTGCCCGTGGCCGTCGCCTTGCGCGCGATCCCCATTATCACCACCGCACCGCTGATCGTGCTGGCGCTGGGGCGCG
GCGCGACCGGCACGATCGCGGTCATTGCGGTGATGATCTTTTTCCCGACATTCGTGGCCTGCCTGCAGGGGTTGCGGCAA
ACGCCTCGGGCCGTGAGCGACCTTTTTCGCAGCTATGGCGCCGGCCCCGTGACCGTCCTGTACCTCGCCCAGATCCCGGG
CATGCTGCCTGCATTCTTTGCTGCGGCGAAAATGGCGGTGCCTGCCGCCATTCTGGCCGTCACAACGACGGAATGGCTGG
TCACGGGCAAAGGGATCGGGCTGTTGGTGGCCTTGACCTCCACCACCTCCAACTACAATATGTTGTGGTCCTGCATCGTT
GCGACAACGGTGCTTGCGGTCGTGATCTATGCGGTTGTGGTCCGGGTGGAGCGCGTGGTTTTATCAAAATATGCAAGTGA
ACAGGTGATATGA

Upstream 100 bases:

>100_bases
GGTGATCTTTGAGCCCCCGCGCGGCATCTCCGTCACGCGGTTGCCGGCGTTTCAATCCAAAACCAAAGAGGTGCTCGACG
CCCTTGGGGTCATCCTCTGA

Downstream 100 bases:

>100_bases
CACGGGCGGTCTTTGCAATTCCGGGCGACAAGGATCGCAGAACCGGCGGCTTTCTCTATGAGGCCACGGTGTTGCGTGTG
CTCAACGATATGGGGTTTGA

Product: ABC transporter, permease protein, putative

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MSIRRGTIAAVVLLGLWEGAAQVLSDGVLFVGPLGILFHIGANPGLLVRATATTTQNAALGFLWGNLAAVLMASVVVVLP
RTERVISSAALVVFCLPLVATGPILRVISGPGDTPQIALAALAVYYTTFLAMRVGLRAMPANWSDLMSVYGRGALATLLT
VRARASLPYLFVGLQIAAPAAFLGAMIGEFTGAERGLGVLTLRAMRSLDVEATWSLAVISAAMAMLLYALVGAAGRWLVG
YTPDIILSPPRTMAHNRWTGMLQACGAALLLILLWQISMDLADLNRFFAKRPADVLSYLLADAPARATLLRALAETTATT
IPGYLAGLVLGAALAMGVILLPRASGVVLPVAVALRAIPIITTAPLIVLALGRGATGTIAVIAVMIFFPTFVACLQGLRQ
TPRAVSDLFRSYGAGPVTVLYLAQIPGMLPAFFAAAKMAVPAAILAVTTTEWLVTGKGIGLLVALTSTTSNYNMLWSCIV
ATTVLAVVIYAVVVRVERVVLSKYASEQVI

Sequences:

>Translated_510_residues
MSIRRGTIAAVVLLGLWEGAAQVLSDGVLFVGPLGILFHIGANPGLLVRATATTTQNAALGFLWGNLAAVLMASVVVVLP
RTERVISSAALVVFCLPLVATGPILRVISGPGDTPQIALAALAVYYTTFLAMRVGLRAMPANWSDLMSVYGRGALATLLT
VRARASLPYLFVGLQIAAPAAFLGAMIGEFTGAERGLGVLTLRAMRSLDVEATWSLAVISAAMAMLLYALVGAAGRWLVG
YTPDIILSPPRTMAHNRWTGMLQACGAALLLILLWQISMDLADLNRFFAKRPADVLSYLLADAPARATLLRALAETTATT
IPGYLAGLVLGAALAMGVILLPRASGVVLPVAVALRAIPIITTAPLIVLALGRGATGTIAVIAVMIFFPTFVACLQGLRQ
TPRAVSDLFRSYGAGPVTVLYLAQIPGMLPAFFAAAKMAVPAAILAVTTTEWLVTGKGIGLLVALTSTTSNYNMLWSCIV
ATTVLAVVIYAVVVRVERVVLSKYASEQVI
>Mature_509_residues
SIRRGTIAAVVLLGLWEGAAQVLSDGVLFVGPLGILFHIGANPGLLVRATATTTQNAALGFLWGNLAAVLMASVVVVLPR
TERVISSAALVVFCLPLVATGPILRVISGPGDTPQIALAALAVYYTTFLAMRVGLRAMPANWSDLMSVYGRGALATLLTV
RARASLPYLFVGLQIAAPAAFLGAMIGEFTGAERGLGVLTLRAMRSLDVEATWSLAVISAAMAMLLYALVGAAGRWLVGY
TPDIILSPPRTMAHNRWTGMLQACGAALLLILLWQISMDLADLNRFFAKRPADVLSYLLADAPARATLLRALAETTATTI
PGYLAGLVLGAALAMGVILLPRASGVVLPVAVALRAIPIITTAPLIVLALGRGATGTIAVIAVMIFFPTFVACLQGLRQT
PRAVSDLFRSYGAGPVTVLYLAQIPGMLPAFFAAAKMAVPAAILAVTTTEWLVTGKGIGLLVALTSTTSNYNMLWSCIVA
TTVLAVVIYAVVVRVERVVLSKYASEQVI

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 53333; Mature: 53201

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRRGTIAAVVLLGLWEGAAQVLSDGVLFVGPLGILFHIGANPGLLVRATATTTQNAAL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHEEECCCCCEEEEEECCCCCCCHH
GFLWGNLAAVLMASVVVVLPRTERVISSAALVVFCLPLVATGPILRVISGPGDTPQIALA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHH
ALAVYYTTFLAMRVGLRAMPANWSDLMSVYGRGALATLLTVRARASLPYLFVGLQIAAPA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHH
AFLGAMIGEFTGAERGLGVLTLRAMRSLDVEATWSLAVISAAMAMLLYALVGAAGRWLVG
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
YTPDIILSPPRTMAHNRWTGMLQACGAALLLILLWQISMDLADLNRFFAKRPADVLSYLL
CCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ADAPARATLLRALAETTATTIPGYLAGLVLGAALAMGVILLPRASGVVLPVAVALRAIPI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ITTAPLIVLALGRGATGTIAVIAVMIFFPTFVACLQGLRQTPRAVSDLFRSYGAGPVTVL
HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHH
YLAQIPGMLPAFFAAAKMAVPAAILAVTTTEWLVTGKGIGLLVALTSTTSNYNMLWSCIV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCHHHHHHHHH
ATTVLAVVIYAVVVRVERVVLSKYASEQVI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SIRRGTIAAVVLLGLWEGAAQVLSDGVLFVGPLGILFHIGANPGLLVRATATTTQNAAL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHEEECCCCCEEEEEECCCCCCCHH
GFLWGNLAAVLMASVVVVLPRTERVISSAALVVFCLPLVATGPILRVISGPGDTPQIALA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHH
ALAVYYTTFLAMRVGLRAMPANWSDLMSVYGRGALATLLTVRARASLPYLFVGLQIAAPA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHH
AFLGAMIGEFTGAERGLGVLTLRAMRSLDVEATWSLAVISAAMAMLLYALVGAAGRWLVG
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
YTPDIILSPPRTMAHNRWTGMLQACGAALLLILLWQISMDLADLNRFFAKRPADVLSYLL
CCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ADAPARATLLRALAETTATTIPGYLAGLVLGAALAMGVILLPRASGVVLPVAVALRAIPI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ITTAPLIVLALGRGATGTIAVIAVMIFFPTFVACLQGLRQTPRAVSDLFRSYGAGPVTVL
HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHH
YLAQIPGMLPAFFAAAKMAVPAAILAVTTTEWLVTGKGIGLLVALTSTTSNYNMLWSCIV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCHHHHHHHHH
ATTVLAVVIYAVVVRVERVVLSKYASEQVI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]