| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is mfpsA [H]
Identifier: 110679596
GI number: 110679596
Start: 2239302
End: 2240342
Strand: Reverse
Name: mfpsA [H]
Synonym: RD1_2341
Alternate gene names: 110679596
Gene position: 2240342-2239302 (Counterclockwise)
Preceding gene: 110679597
Following gene: 110679593
Centisome position: 54.2
GC content: 63.98
Gene sequence:
>1041_bases ATGACACGGGCGGTCTTTGCAATTCCGGGCGACAAGGATCGCAGAACCGGCGGCTTTCTCTATGAGGCCACGGTGTTGCG TGTGCTCAACGATATGGGGTTTGAGACCGCGCATCTGCAACTTCCGGATGGGTTTCCCGATCCATCCGCCCGCGACATGC AATGCGCACTCGCAGCCCTGCGTGATGTGCCCGCAGATGTGCCGATCATTCTGGATGGTCTGGTGTTCGGGGCCATTGAC CCTCAGGGGCTGGCGCAGGTGCAAGCACCGATCATCGCGATGATCCACCATCCCCTCGGCACTGAAACCGGCCTGTCACC AGCGCGCGCGGCCTTCTTGCGCGCCAATGAGGCGGCGGCGCTTGCGCATACGGCGCAGGTGATCGTCCCGAGCCCGCACA CCGCGCAGGTGCTGACACAGGAGTTTGGTGCCGACCCCGAAACGATCACCGTCGCGCTGCCCGGATTTGACCGCCCCACG AGGAGCAGCGCCCCGGTTGACCCCCCGTTGATCCTCTCTGTCGGCCTTCTGGCAGAGCGCAAGGGGCATGACGTGCTGCT CGATGCGCTGTCGAGGATCAGGGATCTGGACTGGAGCGCGGCAATCGTGGGGCAGGCGCATGATCCGCTGGTTGCCGACA AGCTGCGTGATCAGTGCCGTGACCTTGATCTGTGCGCGCGTGTCCGTTTCGCCGGAGAACTGGGCGAAGCAGCGCTGCGC CAGCATTTCGAGGCGGCGTCGATCTTTGCCCTTGCCACCCGCTACGAGGGCTACGGCATGGTGTTGAGCGAGGCGATGCT CTTTGACCTGCCGGTCGTGTCCTGCCATGTCGGGGCCGTGCCGGAAACCGTTGGCGGCGCAGGTTTGCTGACACCGCCCG ATGACCCGAGCGCCTTTGCGGCTGCGTTGCGGCGCATTCTTGAGTGCCCGGAAACCGCGGCGCAATTCAGCGCTTTGTCC AAAACCCGCGCCAACGCCCTGCCCACGTGGCAGGACACGGCGACAATATTTAAAACCGTTGTCCAAAAAGCGTCCCCCTA G
Upstream 100 bases:
>100_bases CCTGCATCGTTGCGACAACGGTGCTTGCGGTCGTGATCTATGCGGTTGTGGTCCGGGTGGAGCGCGTGGTTTTATCAAAA TATGCAAGTGAACAGGTGAT
Downstream 100 bases:
>100_bases ACGCAGCACCCCTTGGCAGAAAACATCAGCTTCGCAGCGGCCAAGCGGCACCGCCTGCCTCTGCTCCTTCGGGGCGTTCC TGTGCCATGTCGCCCTATCT
Product: glycosyltransferase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MTRAVFAIPGDKDRRTGGFLYEATVLRVLNDMGFETAHLQLPDGFPDPSARDMQCALAALRDVPADVPIILDGLVFGAID PQGLAQVQAPIIAMIHHPLGTETGLSPARAAFLRANEAAALAHTAQVIVPSPHTAQVLTQEFGADPETITVALPGFDRPT RSSAPVDPPLILSVGLLAERKGHDVLLDALSRIRDLDWSAAIVGQAHDPLVADKLRDQCRDLDLCARVRFAGELGEAALR QHFEAASIFALATRYEGYGMVLSEAMLFDLPVVSCHVGAVPETVGGAGLLTPPDDPSAFAAALRRILECPETAAQFSALS KTRANALPTWQDTATIFKTVVQKASP
Sequences:
>Translated_346_residues MTRAVFAIPGDKDRRTGGFLYEATVLRVLNDMGFETAHLQLPDGFPDPSARDMQCALAALRDVPADVPIILDGLVFGAID PQGLAQVQAPIIAMIHHPLGTETGLSPARAAFLRANEAAALAHTAQVIVPSPHTAQVLTQEFGADPETITVALPGFDRPT RSSAPVDPPLILSVGLLAERKGHDVLLDALSRIRDLDWSAAIVGQAHDPLVADKLRDQCRDLDLCARVRFAGELGEAALR QHFEAASIFALATRYEGYGMVLSEAMLFDLPVVSCHVGAVPETVGGAGLLTPPDDPSAFAAALRRILECPETAAQFSALS KTRANALPTWQDTATIFKTVVQKASP >Mature_345_residues TRAVFAIPGDKDRRTGGFLYEATVLRVLNDMGFETAHLQLPDGFPDPSARDMQCALAALRDVPADVPIILDGLVFGAIDP QGLAQVQAPIIAMIHHPLGTETGLSPARAAFLRANEAAALAHTAQVIVPSPHTAQVLTQEFGADPETITVALPGFDRPTR SSAPVDPPLILSVGLLAERKGHDVLLDALSRIRDLDWSAAIVGQAHDPLVADKLRDQCRDLDLCARVRFAGELGEAALRQ HFEAASIFALATRYEGYGMVLSEAMLFDLPVVSCHVGAVPETVGGAGLLTPPDDPSAFAAALRRILECPETAAQFSALSK TRANALPTWQDTATIFKTVVQKASP
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR000368 [H]
Pfam domain/function: PF00534 Glycos_transf_1; PF00862 Sucrose_synth [H]
EC number: =2.4.1.246 [H]
Molecular weight: Translated: 36799; Mature: 36668
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAVFAIPGDKDRRTGGFLYEATVLRVLNDMGFETAHLQLPDGFPDPSARDMQCALAAL CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHH RDVPADVPIILDGLVFGAIDPQGLAQVQAPIIAMIHHPLGTETGLSPARAAFLRANEAAA HHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH LAHTAQVIVPSPHTAQVLTQEFGADPETITVALPGFDRPTRSSAPVDPPLILSVGLLAER HHHHEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCC KGHDVLLDALSRIRDLDWSAAIVGQAHDPLVADKLRDQCRDLDLCARVRFAGELGEAALR CCCHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH QHFEAASIFALATRYEGYGMVLSEAMLFDLPVVSCHVGAVPETVGGAGLLTPPDDPSAFA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCCCCCCCHHHHH AALRRILECPETAAQFSALSKTRANALPTWQDTATIFKTVVQKASP HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TRAVFAIPGDKDRRTGGFLYEATVLRVLNDMGFETAHLQLPDGFPDPSARDMQCALAAL CCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHH RDVPADVPIILDGLVFGAIDPQGLAQVQAPIIAMIHHPLGTETGLSPARAAFLRANEAAA HHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH LAHTAQVIVPSPHTAQVLTQEFGADPETITVALPGFDRPTRSSAPVDPPLILSVGLLAER HHHHEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCC KGHDVLLDALSRIRDLDWSAAIVGQAHDPLVADKLRDQCRDLDLCARVRFAGELGEAALR CCCHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH QHFEAASIFALATRYEGYGMVLSEAMLFDLPVVSCHVGAVPETVGGAGLLTPPDDPSAFA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCCCCCCCHHHHH AALRRILECPETAAQFSALSKTRANALPTWQDTATIFKTVVQKASP HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]