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The map label for this gene is aglF [H]

Identifier: 110679580

GI number: 110679580

Start: 2217350

End: 2218330

Strand: Direct

Name: aglF [H]

Synonym: RD1_2323

Alternate gene names: 110679580

Gene position: 2217350-2218330 (Clockwise)

Preceding gene: 110679579

Following gene: 110679581

Centisome position: 53.65

GC content: 56.17

Gene sequence:

>981_bases
ATGTCACCACTCGTGCAAGGAATGTTGACCATCTTTATCGGTGTCGGTGGATGTGTCGGATATTTCTACCTGTCGAACCT
GATCCTCGACAAAGTGATTTTCCCGGCCAGGGGCGACAACCCCGGGATCAACATCAACCGTGCCAACCTAGTGCGGCCCT
GGTTGTTTCTGTTTCCGGCGATGGCTGCCTTGGGCCTCTACCTTGTTTATCCGGTGGTCGGTTCGTTCTGGCGGTCCCTC
TACAACCGGTCGGGCGACGAATTCATTGGCTTTGGCAATTACGCGGTCATGTTCAGCGATGACGGCTTTCAGGTGGCATT
GTTCAACAACTTCCTGTGGGTTCTGATCGTGCCCGCCGGGGCCACGTTCCTTGGCCTGCTGGTGGCGCAGCTGACGGATC
GGCTCAAATGGGGCAATATCGCAAAATCGCTGATCTTCATGCCGATGGCGATTTCCTTCGTAGGCGCGTCGCTGATCTGG
AAATTCGTCTACGCAAACAACGCGGATATTGGTCTGATCAACGCGCTGCGCGACTTCTTCGGCGCCGAAGAACCGCTCGA
CGTGCTGCAGGTGCGGTTCTGGAACAATTTCTTTCTGATGGTGATCCTGATCTGGATCCAGACCGGGTTCGCCATGGTCA
TTCTGTCGGCGGCCCTGCGTGGCATCCCCGAAGAGACCGTAGAGGCCGCGATCATCGACGGGGCCAACCCGTTTCAGGTG
TTCTTCAAGATCAAGGTGCCGCAGATCATGGGCACGATTGTCGTGGTCTGGACGACGATCACCATCCTCGTGCTCAAGGT
TTTCGATATCGTTTACACCATGACGGGCGGTAACTTCGGCACCGAAATCCTGCCCAGTTACATGATGTCCTACATGTTCC
GGGATGACGGGCGCGCGACCGCGGTGGCCTTTGTCATCATGATCATCGTGTTACCGGTGATGATCTGGAACATCCGTCAA
GCCCGCGCGGAGATGAGGTAA

Upstream 100 bases:

>100_bases
GGACCGCTGGGACGCGATCCAGTAAGTACCGCCTAGATCACTTCGCCCGGCAGGAACACCCTGCCGGGCGGATCACATGT
CATCCTGGGGAGCGTCTGAT

Downstream 100 bases:

>100_bases
GCCATGGATAATATTGCTGGAACGAAGTCTTCGCTCGGATGGGCCGTCAATATCTCGGTGGTGTTTCTGGTCCTGCTCTG
GCTGATCCCCACTGTGGGGC

Product: alpha-glucoside transporter, permease protein AglF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSPLVQGMLTIFIGVGGCVGYFYLSNLILDKVIFPARGDNPGININRANLVRPWLFLFPAMAALGLYLVYPVVGSFWRSL
YNRSGDEFIGFGNYAVMFSDDGFQVALFNNFLWVLIVPAGATFLGLLVAQLTDRLKWGNIAKSLIFMPMAISFVGASLIW
KFVYANNADIGLINALRDFFGAEEPLDVLQVRFWNNFFLMVILIWIQTGFAMVILSAALRGIPEETVEAAIIDGANPFQV
FFKIKVPQIMGTIVVVWTTITILVLKVFDIVYTMTGGNFGTEILPSYMMSYMFRDDGRATAVAFVIMIIVLPVMIWNIRQ
ARAEMR

Sequences:

>Translated_326_residues
MSPLVQGMLTIFIGVGGCVGYFYLSNLILDKVIFPARGDNPGININRANLVRPWLFLFPAMAALGLYLVYPVVGSFWRSL
YNRSGDEFIGFGNYAVMFSDDGFQVALFNNFLWVLIVPAGATFLGLLVAQLTDRLKWGNIAKSLIFMPMAISFVGASLIW
KFVYANNADIGLINALRDFFGAEEPLDVLQVRFWNNFFLMVILIWIQTGFAMVILSAALRGIPEETVEAAIIDGANPFQV
FFKIKVPQIMGTIVVVWTTITILVLKVFDIVYTMTGGNFGTEILPSYMMSYMFRDDGRATAVAFVIMIIVLPVMIWNIRQ
ARAEMR
>Mature_325_residues
SPLVQGMLTIFIGVGGCVGYFYLSNLILDKVIFPARGDNPGININRANLVRPWLFLFPAMAALGLYLVYPVVGSFWRSLY
NRSGDEFIGFGNYAVMFSDDGFQVALFNNFLWVLIVPAGATFLGLLVAQLTDRLKWGNIAKSLIFMPMAISFVGASLIWK
FVYANNADIGLINALRDFFGAEEPLDVLQVRFWNNFFLMVILIWIQTGFAMVILSAALRGIPEETVEAAIIDGANPFQVF
FKIKVPQIMGTIVVVWTTITILVLKVFDIVYTMTGGNFGTEILPSYMMSYMFRDDGRATAVAFVIMIIVLPVMIWNIRQA
RAEMR

Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=240, Percent_Identity=30.4166666666667, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789861, Length=294, Percent_Identity=22.7891156462585, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1790465, Length=259, Percent_Identity=25.4826254826255, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36492; Mature: 36361

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLVQGMLTIFIGVGGCVGYFYLSNLILDKVIFPARGDNPGININRANLVRPWLFLFPA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
MAALGLYLVYPVVGSFWRSLYNRSGDEFIGFGNYAVMFSDDGFQVALFNNFLWVLIVPAG
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCEEEEEECCCEEEEEECCC
ATFLGLLVAQLTDRLKWGNIAKSLIFMPMAISFVGASLIWKFVYANNADIGLINALRDFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GAEEPLDVLQVRFWNNFFLMVILIWIQTGFAMVILSAALRGIPEETVEAAIIDGANPFQV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEE
FFKIKVPQIMGTIVVVWTTITILVLKVFDIVYTMTGGNFGTEILPSYMMSYMFRDDGRAT
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHH
AVAFVIMIIVLPVMIWNIRQARAEMR
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPLVQGMLTIFIGVGGCVGYFYLSNLILDKVIFPARGDNPGININRANLVRPWLFLFPA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
MAALGLYLVYPVVGSFWRSLYNRSGDEFIGFGNYAVMFSDDGFQVALFNNFLWVLIVPAG
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCEEEEEECCCEEEEEECCC
ATFLGLLVAQLTDRLKWGNIAKSLIFMPMAISFVGASLIWKFVYANNADIGLINALRDFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GAEEPLDVLQVRFWNNFFLMVILIWIQTGFAMVILSAALRGIPEETVEAAIIDGANPFQV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEE
FFKIKVPQIMGTIVVVWTTITILVLKVFDIVYTMTGGNFGTEILPSYMMSYMFRDDGRAT
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHH
AVAFVIMIIVLPVMIWNIRQARAEMR
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]