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The map label for this gene is ycsN [H]

Identifier: 110679570

GI number: 110679570

Start: 2206976

End: 2207866

Strand: Direct

Name: ycsN [H]

Synonym: RD1_2311

Alternate gene names: 110679570

Gene position: 2206976-2207866 (Clockwise)

Preceding gene: 110679569

Following gene: 110679571

Centisome position: 53.4

GC content: 59.6

Gene sequence:

>891_bases
ATGGAACGTGTAAGCCTGTCTGCTGATGTGCACGTCAGCCGGATCATCTATGGCATGTGGCGTCTGGCGGAGGACGAAGA
CACATCTCCGTCCCATGTGCGCGCCAAGATCGACGCCTGTCTTGCGCAGGGGATTACCACTTTGGATCAGGCCGATATCT
ACGGTGGATATGCGGCCGAAGCGCTGTTGGGCGCGGCGTTTGAACAAAGCCCGGGCCTGCGCGATGACCTGCAGATCATC
ACGAAATGCGATATCGTCGCGCCGGTTGGCAAATACGCTGCGGCCCGGGTCAAGCATTACGATACATCCGCCGCCCATAT
CACCGCATCGGTGGAGGCGTCGCTGTCGAATATGCGCATTGAGCAGATCGATGTTTTGCTGATTCACCGCCCGGACCCGA
TGATGGATGCGCGTGAAACCGGTGCGGCGCTCGATGCGCTGATTGACAGCGGCAAGATCAAAACGGCAGGCGTGTCGAAT
TTCAAACCGTGGGATTGGGATTTGCTGCAAGCGCATATGAAACACCCGCTTGTGAGCAACCAACTCGAACTCAGCCTTGC
GGCGCGCGACAGTTTCACCAACGGCGATCTGGCCCATGCGCAACAACATGGCGTGCGCCCGATGGCATGGTCGCCCCTGG
GTGGGGGCTCTCTGATGACACAGCAGGGCGAACCGGGCCTTGCCTTGGAAAAAGTCGCAGAGGCGCAAGGCGTTGATCGC
GCAGCGGTCGCGGTTGCATGGCTGCTGGCGCATCCTTCGGGGATTTTGCCGGTGATGGGCACCAACACGCTGCCCCGCAT
TGCGACCTTCAGCGATGCAACGAAGGTTGAGATGGACCGCCAGACGTGGTTTGAGCTGTTTGAAGCCGCAAACGGGCATG
AGGTGCCTTGA

Upstream 100 bases:

>100_bases
TGGTGCTGCCGGAGCTTGAAACATGTTCCTTGCCGCATGCCTATGGCCGCGTCCCGGACACATGCCCCGCAACACCGCTT
GGAACAGGAGAACGCCGCTG

Downstream 100 bases:

>100_bases
TGCCGGATGGAACCACCAAAGGGACGGCGATGCTGCACTTCGAGCCCACACAGGACAACCACCGCATGTTTCGCGATGCG
TTGGGACGGTTTGCATCAGG

Product: oxidoreductase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MERVSLSADVHVSRIIYGMWRLAEDEDTSPSHVRAKIDACLAQGITTLDQADIYGGYAAEALLGAAFEQSPGLRDDLQII
TKCDIVAPVGKYAAARVKHYDTSAAHITASVEASLSNMRIEQIDVLLIHRPDPMMDARETGAALDALIDSGKIKTAGVSN
FKPWDWDLLQAHMKHPLVSNQLELSLAARDSFTNGDLAHAQQHGVRPMAWSPLGGGSLMTQQGEPGLALEKVAEAQGVDR
AAVAVAWLLAHPSGILPVMGTNTLPRIATFSDATKVEMDRQTWFELFEAANGHEVP

Sequences:

>Translated_296_residues
MERVSLSADVHVSRIIYGMWRLAEDEDTSPSHVRAKIDACLAQGITTLDQADIYGGYAAEALLGAAFEQSPGLRDDLQII
TKCDIVAPVGKYAAARVKHYDTSAAHITASVEASLSNMRIEQIDVLLIHRPDPMMDARETGAALDALIDSGKIKTAGVSN
FKPWDWDLLQAHMKHPLVSNQLELSLAARDSFTNGDLAHAQQHGVRPMAWSPLGGGSLMTQQGEPGLALEKVAEAQGVDR
AAVAVAWLLAHPSGILPVMGTNTLPRIATFSDATKVEMDRQTWFELFEAANGHEVP
>Mature_296_residues
MERVSLSADVHVSRIIYGMWRLAEDEDTSPSHVRAKIDACLAQGITTLDQADIYGGYAAEALLGAAFEQSPGLRDDLQII
TKCDIVAPVGKYAAARVKHYDTSAAHITASVEASLSNMRIEQIDVLLIHRPDPMMDARETGAALDALIDSGKIKTAGVSN
FKPWDWDLLQAHMKHPLVSNQLELSLAARDSFTNGDLAHAQQHGVRPMAWSPLGGGSLMTQQGEPGLALEKVAEAQGVDR
AAVAVAWLLAHPSGILPVMGTNTLPRIATFSDATKVEMDRQTWFELFEAANGHEVP

Specific function: Unknown

COG id: COG4989

COG function: function code R; Predicted oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI48994888, Length=287, Percent_Identity=39.7212543554007, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1788081, Length=276, Percent_Identity=25.3623188405797, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI87081735, Length=323, Percent_Identity=26.9349845201238, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789375, Length=252, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31968; Mature: 31968

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVSLSADVHVSRIIYGMWRLAEDEDTSPSHVRAKIDACLAQGITTLDQADIYGGYAAE
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHH
ALLGAAFEQSPGLRDDLQIITKCDIVAPVGKYAAARVKHYDTSAAHITASVEASLSNMRI
HHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCEE
EQIDVLLIHRPDPMMDARETGAALDALIDSGKIKTAGVSNFKPWDWDLLQAHMKHPLVSN
EEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCC
QLELSLAARDSFTNGDLAHAQQHGVRPMAWSPLGGGSLMTQQGEPGLALEKVAEAQGVDR
CEEEEEEECCCCCCCCHHHHHHCCCCCCEECCCCCCCEECCCCCCCHHHHHHHHHCCCCH
AAVAVAWLLAHPSGILPVMGTNTLPRIATFSDATKVEMDRQTWFELFEAANGHEVP
HHHHHHHHHHCCCCCEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MERVSLSADVHVSRIIYGMWRLAEDEDTSPSHVRAKIDACLAQGITTLDQADIYGGYAAE
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHH
ALLGAAFEQSPGLRDDLQIITKCDIVAPVGKYAAARVKHYDTSAAHITASVEASLSNMRI
HHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCEE
EQIDVLLIHRPDPMMDARETGAALDALIDSGKIKTAGVSNFKPWDWDLLQAHMKHPLVSN
EEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCC
QLELSLAARDSFTNGDLAHAQQHGVRPMAWSPLGGGSLMTQQGEPGLALEKVAEAQGVDR
CEEEEEEECCCCCCCCHHHHHHCCCCCCEECCCCCCCEECCCCCCCHHHHHHHHHCCCCH
AAVAVAWLLAHPSGILPVMGTNTLPRIATFSDATKVEMDRQTWFELFEAANGHEVP
HHHHHHHHHHCCCCCEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]