| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is mocA [H]
Identifier: 110679567
GI number: 110679567
Start: 2203904
End: 2205004
Strand: Reverse
Name: mocA [H]
Synonym: RD1_2308
Alternate gene names: 110679567
Gene position: 2205004-2203904 (Counterclockwise)
Preceding gene: 110679568
Following gene: 110679562
Centisome position: 53.35
GC content: 60.31
Gene sequence:
>1101_bases ATGACCCAACTGGTAAGATACGGCATCATTGGCTGCGGCATGATGGGGCAGGAACACCTGCGCAATATCGCCCTGCTGGA TGGCGCAGGCGTCAGCGCGATTTTTGAACCGGATGCCGCCATGCAACGGGCCGCACACGCCATCGCGCCACAGGCCGCTT TTTATCCGTCTGTGCAGGCGCTGCTGGCCTCTGCCGATATTGACTGTCTCGTTATTGCCAGCCCGAATTACTGCCACGCC GATCAGATCGTCGAAATCGCCGCCACACGCCCCCTGCCCCTTCTCGTTGAAAAACCCCTGCTGACTGATCCCGCCGATAT CGCGCGACTGACGCAAACGGCAGAGCGCTATCCGGCCCCCATCTGGGTCGCGATGGAATACCGTTACATGCCGCCGATCG CTGCCTTGCTGGCGCGTGCCGAGGCTGTCACCGGTGGCATCAAGATGCTGAGCCTGCGCGAACACCGGTTTCCCTTTCTG GAAAAGGTGGGCGACTGGAACCGGTTCAATGTCAACACTGGCGGCACATTCGTGGAAAAGTGCTGCCATTTCTTTGACCT GATGCGGTTGGTCTTGCGACGCAATCCGGTGCGCGTCATGGCAAGTGCCGCGCAATCCGTGAACCATCTGGATGAGCGTT ATGACGGCAAAACCCCCGACATTCTTGACAATGGATATGTCATTGTCGACTTCGAGGGCGGCGCACGGGCGATGCTGGAA CTCTGTATGTTCGCGGATGGCGCAAGATATCAGGAGACCATTTCAGCCGTCGGACCGGCGGGGAAAATCGAAGCCTTCGT GCCCGGGCCGACGCGTTTCTGGCCCGGCGATCTGGGCGCCCCGCCCGTCCCCCTGATCGAGATCAGCCCCCGCCTGTCAA AACAGATCAAAGTGCATGAAATACCTGTCGATCCGAAGCTGCTCAAGGCGGGGGATCACAATGGCGCCACCTATTTCCAG CATCAAAGGTTCATGGCCCTTGTGCAGGGCAGCAGCACCGAAACAGAGGTGTCCTTCAGCGATGGCCTGTGGGCTGTGCG CATGGGGATGGCCGCGCAGCATTCGGCCGCCACCGGGCAGGCTGTCACCCTTGAGGGCTGA
Upstream 100 bases:
>100_bases TTAGCTGGGCAGAACATCCCGAAGCGGTGGAATTCTCGCGCACATGGTTTGACCCGAACCGCGCGGTATATGTGCAGCGT TTGAAATAAGGAGTCGCCCG
Downstream 100 bases:
>100_bases GCTTTCTGTGGAGAAGCACCTTTGGTGTGCACCTCTCCGCCTAGTCGCGCGTGGCGATATCACTTAAACAACAGCGCTCG GCTTACGTTTTATTCGTGCG
Product: oxidoreductase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MTQLVRYGIIGCGMMGQEHLRNIALLDGAGVSAIFEPDAAMQRAAHAIAPQAAFYPSVQALLASADIDCLVIASPNYCHA DQIVEIAATRPLPLLVEKPLLTDPADIARLTQTAERYPAPIWVAMEYRYMPPIAALLARAEAVTGGIKMLSLREHRFPFL EKVGDWNRFNVNTGGTFVEKCCHFFDLMRLVLRRNPVRVMASAAQSVNHLDERYDGKTPDILDNGYVIVDFEGGARAMLE LCMFADGARYQETISAVGPAGKIEAFVPGPTRFWPGDLGAPPVPLIEISPRLSKQIKVHEIPVDPKLLKAGDHNGATYFQ HQRFMALVQGSSTETEVSFSDGLWAVRMGMAAQHSAATGQAVTLEG
Sequences:
>Translated_366_residues MTQLVRYGIIGCGMMGQEHLRNIALLDGAGVSAIFEPDAAMQRAAHAIAPQAAFYPSVQALLASADIDCLVIASPNYCHA DQIVEIAATRPLPLLVEKPLLTDPADIARLTQTAERYPAPIWVAMEYRYMPPIAALLARAEAVTGGIKMLSLREHRFPFL EKVGDWNRFNVNTGGTFVEKCCHFFDLMRLVLRRNPVRVMASAAQSVNHLDERYDGKTPDILDNGYVIVDFEGGARAMLE LCMFADGARYQETISAVGPAGKIEAFVPGPTRFWPGDLGAPPVPLIEISPRLSKQIKVHEIPVDPKLLKAGDHNGATYFQ HQRFMALVQGSSTETEVSFSDGLWAVRMGMAAQHSAATGQAVTLEG >Mature_365_residues TQLVRYGIIGCGMMGQEHLRNIALLDGAGVSAIFEPDAAMQRAAHAIAPQAAFYPSVQALLASADIDCLVIASPNYCHAD QIVEIAATRPLPLLVEKPLLTDPADIARLTQTAERYPAPIWVAMEYRYMPPIAALLARAEAVTGGIKMLSLREHRFPFLE KVGDWNRFNVNTGGTFVEKCCHFFDLMRLVLRRNPVRVMASAAQSVNHLDERYDGKTPDILDNGYVIVDFEGGARAMLEL CMFADGARYQETISAVGPAGKIEAFVPGPTRFWPGDLGAPPVPLIEISPRLSKQIKVHEIPVDPKLLKAGDHNGATYFQH QRFMALVQGSSTETEVSFSDGLWAVRMGMAAQHSAATGQAVTLEG
Specific function: Could catalyze the NADH-dependent dehydrogenase reaction involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism [H]
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39915; Mature: 39783
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLVRYGIIGCGMMGQEHLRNIALLDGAGVSAIFEPDAAMQRAAHAIAPQAAFYPSVQA CCCHHHHHHHHCCCCCHHHHCEEEEECCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHH LLASADIDCLVIASPNYCHADQIVEIAATRPLPLLVEKPLLTDPADIARLTQTAERYPAP HHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCC IWVAMEYRYMPPIAALLARAEAVTGGIKMLSLREHRFPFLEKVGDWNRFNVNTGGTFVEK EEEEEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCHHHHHCCCCCEEECCCCCHHHHH CCHFFDLMRLVLRRNPVRVMASAAQSVNHLDERYDGKTPDILDNGYVIVDFEGGARAMLE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCHHHHHH LCMFADGARYQETISAVGPAGKIEAFVPGPTRFWPGDLGAPPVPLIEISPRLSKQIKVHE HHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCHHCCEEEEE IPVDPKLLKAGDHNGATYFQHQRFMALVQGSSTETEVSFSDGLWAVRMGMAAQHSAATGQ CCCCCHHEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEHHHCCHHCCCCCCCC AVTLEG EEEECC >Mature Secondary Structure TQLVRYGIIGCGMMGQEHLRNIALLDGAGVSAIFEPDAAMQRAAHAIAPQAAFYPSVQA CCHHHHHHHHCCCCCHHHHCEEEEECCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHH LLASADIDCLVIASPNYCHADQIVEIAATRPLPLLVEKPLLTDPADIARLTQTAERYPAP HHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCC IWVAMEYRYMPPIAALLARAEAVTGGIKMLSLREHRFPFLEKVGDWNRFNVNTGGTFVEK EEEEEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCHHHHHCCCCCEEECCCCCHHHHH CCHFFDLMRLVLRRNPVRVMASAAQSVNHLDERYDGKTPDILDNGYVIVDFEGGARAMLE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCHHHHHH LCMFADGARYQETISAVGPAGKIEAFVPGPTRFWPGDLGAPPVPLIEISPRLSKQIKVHE HHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCHHCCEEEEE IPVDPKLLKAGDHNGATYFQHQRFMALVQGSSTETEVSFSDGLWAVRMGMAAQHSAATGQ CCCCCHHEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEHHHCCHHCCCCCCCC AVTLEG EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]