Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is yexA [H]

Identifier: 110679528

GI number: 110679528

Start: 2163527

End: 2163787

Strand: Direct

Name: yexA [H]

Synonym: RD1_2263

Alternate gene names: 110679528

Gene position: 2163527-2163787 (Clockwise)

Preceding gene: 110679527

Following gene: 110679529

Centisome position: 52.35

GC content: 57.85

Gene sequence:

>261_bases
GTGCGTCCGGGGCGCACAGAAGGACGAGACATGAAAGCACGAGTACATGTTATGCTGAAAAACGGTGTGCTGGACCCGCA
GGGCGAAGCAGTGCGCCACGCCTTGGGGGCCATGGGATTTGAAGGTATCAATGGCGTGCGACAGGGCAAGGTCATCGAGC
TTGATCTGGCCGAAGGCACGACCGAAGCGGACGTGAGCGCGATGTGTGAAAAGCTGCTGGCCAATACGGTGATCGAATCC
TACTCGGTGGAGATTTCCTGA

Upstream 100 bases:

>100_bases
GGCCGATGCCTATACCGAAGTGGCGCAGCGTCTGGGCGTGATGCCCAAGAACGCCACGCCGATCACAAAACCGACCCTGA
TCAACTAACCCCGGGAAACA

Downstream 100 bases:

>100_bases
TGCACGCGGCGGTCGTTGTCTTTCCCGGGTCCAACTGTGATCGCGATCTTGCCGTCGCCTTTGAGGCGGCTGGCGCACAG
GTCACCAAGGTCTGGCACAA

Product: phosphoribosylformylglycinamidine synthase, PurS protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MRPGRTEGRDMKARVHVMLKNGVLDPQGEAVRHALGAMGFEGINGVRQGKVIELDLAEGTTEADVSAMCEKLLANTVIES
YSVEIS

Sequences:

>Translated_86_residues
MRPGRTEGRDMKARVHVMLKNGVLDPQGEAVRHALGAMGFEGINGVRQGKVIELDLAEGTTEADVSAMCEKLLANTVIES
YSVEIS
>Mature_86_residues
MRPGRTEGRDMKARVHVMLKNGVLDPQGEAVRHALGAMGFEGINGVRQGKVIELDLAEGTTEADVSAMCEKLLANTVIES
YSVEIS

Specific function: Unknown

COG id: COG1828

COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0062 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003850
- ProDom:   PD010362 [H]

Pfam domain/function: PF02700 PurS [H]

EC number: NA

Molecular weight: Translated: 9256; Mature: 9256

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPGRTEGRDMKARVHVMLKNGVLDPQGEAVRHALGAMGFEGINGVRQGKVIELDLAEGT
CCCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC
TEADVSAMCEKLLANTVIESYSVEIS
CCCCHHHHHHHHHHHHHHHHCCEECC
>Mature Secondary Structure
MRPGRTEGRDMKARVHVMLKNGVLDPQGEAVRHALGAMGFEGINGVRQGKVIELDLAEGT
CCCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC
TEADVSAMCEKLLANTVIESYSVEIS
CCCCHHHHHHHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3036807; 9384377 [H]