| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is envZ [H]
Identifier: 110679517
GI number: 110679517
Start: 2153976
End: 2155301
Strand: Direct
Name: envZ [H]
Synonym: RD1_2250
Alternate gene names: 110679517
Gene position: 2153976-2155301 (Clockwise)
Preceding gene: 110679514
Following gene: 110679518
Centisome position: 52.12
GC content: 60.48
Gene sequence:
>1326_bases ATGTTCTTTGGGTGGCTCAAACAATATATGCCGCGCAGCCTGTATGTGCGGGCGGTTCTGATCCTGCTGTTGCCGGTGGT TTTCCTGCAACTGGTGGTGACGGTGCTGTTTCTGACCCGACATTTCGAAGACGTCACGCAGCAAATGGTAACGGCCGTTT CCCGCGAGATTCTGCTGGTTCTCGATATTGTTGATACCGCGCCGGATGCAGGCTCCGTGCCAACGCAAGTGGTGGCTCAG GCCAGTCAACTGGCGTTGACGGCCACGCCTGTATCGCCCGACGCTGTGCCGAGCCAGATGTTGCGCCACTGGTATGACTT TTCCGGGCGCGTGATCGTGGCGCGTTTGCCGTCGCGCGTTGCGCAAATCGAAACCATAGATCTGTTGAACGACCAGCGGG TCCATGTTTATGCGCAAACCCGCCATGGCCCGGTCCGCATAAGTTTTGACCGCGATCGCGTCTCGGCCAAGAATCCGCAT CAGCTTTTTGTGAACATGATCTTCTTCGGTGGGCTGGTGACCGTTATCGCCATCCTCTACTTGCGCAATCAGTTGCGGCC GATCAAGCGGTTGGCGCGCGCGGCAGAGGCGTTTGGACGGGGAAGGCATGAGCCCTACACCCCGGCCGGTGCGTCCGAAG TCAGGGCGGCGGGCAATGCGTTTCTGGATATGCGCAACCGGATCGAACGCCAGATCGAACAACGCACCTTGATGCTGTCG GGGGTAAGTCATGATTTGCGCACCCCGCTCACGCGCATGCGGCTCAGCCTGTCCATGCTGGAGGATGCCGAGAGAATACC GCTTGAGCAGGATGTCAACGACATGCAGGAGATGCTTGATGCCTTTCTCAGCTTTGCCAAGGGCGAAGGAGAGGGCGAGC CCGAAGCTGTCGATCCACGCGCATTGGTCAGTGCTGTGGTTGAGGACGCAAAAAGGGCAGGGCGCGATGTCACGCTGGTG GCGCAGGAGGGCGAGGGGACGGGCACTGTCCAACTGAATGTGCTGGCCATAAGGCGCGCGCTGGACAACCTGATTTCCAA TGCGGTGCGCTATGGAACGCGCGCGCAGGTGTCCGTCTTGCTCACGGATAAAACCCTGCGGCTGCGGGTTGAAGACGATG GACCGGGCATTCCGGAAAAGCGGCGGGCAGAGGCGACGCGCCCCTTTACCCGTCTGGATGCAGCGCGCAATCAGGATCAG GGCAGTGGCGTTGGTCTGGGCCTCGCGATCACCAGTGACATCGCGCGCGCGCACGGCGGTATGCTGAGGCTTGGCAAATC TGAACGTCTGGGCGGCCTCAGTGCCGACATCGTCATCGCGCGCTAA
Upstream 100 bases:
>100_bases CCGGCTCTATTGATTGCGGGACGCCGATGGGCGGGTCGAAATCATCTGCCATGGTCATTCAGTCTTTCTAATGCTGGGGG GCACCGTTAGGGTCTACCGC
Downstream 100 bases:
>100_bases AGCGTCACGCGAAAACAGTGTCAGTTGGTTTGGCCCATGTGCAGGGTTTGGAATTCATGGCGGTCATGGTAGGCCCGGCA GGACTTGAACCCGCAACCAA
Product: sensor histidine kinase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MFFGWLKQYMPRSLYVRAVLILLLPVVFLQLVVTVLFLTRHFEDVTQQMVTAVSREILLVLDIVDTAPDAGSVPTQVVAQ ASQLALTATPVSPDAVPSQMLRHWYDFSGRVIVARLPSRVAQIETIDLLNDQRVHVYAQTRHGPVRISFDRDRVSAKNPH QLFVNMIFFGGLVTVIAILYLRNQLRPIKRLARAAEAFGRGRHEPYTPAGASEVRAAGNAFLDMRNRIERQIEQRTLMLS GVSHDLRTPLTRMRLSLSMLEDAERIPLEQDVNDMQEMLDAFLSFAKGEGEGEPEAVDPRALVSAVVEDAKRAGRDVTLV AQEGEGTGTVQLNVLAIRRALDNLISNAVRYGTRAQVSVLLTDKTLRLRVEDDGPGIPEKRRAEATRPFTRLDAARNQDQ GSGVGLGLAITSDIARAHGGMLRLGKSERLGGLSADIVIAR
Sequences:
>Translated_441_residues MFFGWLKQYMPRSLYVRAVLILLLPVVFLQLVVTVLFLTRHFEDVTQQMVTAVSREILLVLDIVDTAPDAGSVPTQVVAQ ASQLALTATPVSPDAVPSQMLRHWYDFSGRVIVARLPSRVAQIETIDLLNDQRVHVYAQTRHGPVRISFDRDRVSAKNPH QLFVNMIFFGGLVTVIAILYLRNQLRPIKRLARAAEAFGRGRHEPYTPAGASEVRAAGNAFLDMRNRIERQIEQRTLMLS GVSHDLRTPLTRMRLSLSMLEDAERIPLEQDVNDMQEMLDAFLSFAKGEGEGEPEAVDPRALVSAVVEDAKRAGRDVTLV AQEGEGTGTVQLNVLAIRRALDNLISNAVRYGTRAQVSVLLTDKTLRLRVEDDGPGIPEKRRAEATRPFTRLDAARNQDQ GSGVGLGLAITSDIARAHGGMLRLGKSERLGGLSADIVIAR >Mature_441_residues MFFGWLKQYMPRSLYVRAVLILLLPVVFLQLVVTVLFLTRHFEDVTQQMVTAVSREILLVLDIVDTAPDAGSVPTQVVAQ ASQLALTATPVSPDAVPSQMLRHWYDFSGRVIVARLPSRVAQIETIDLLNDQRVHVYAQTRHGPVRISFDRDRVSAKNPH QLFVNMIFFGGLVTVIAILYLRNQLRPIKRLARAAEAFGRGRHEPYTPAGASEVRAAGNAFLDMRNRIERQIEQRTLMLS GVSHDLRTPLTRMRLSLSMLEDAERIPLEQDVNDMQEMLDAFLSFAKGEGEGEPEAVDPRALVSAVVEDAKRAGRDVTLV AQEGEGTGTVQLNVLAIRRALDNLISNAVRYGTRAQVSVLLTDKTLRLRVEDDGPGIPEKRRAEATRPFTRLDAARNQDQ GSGVGLGLAITSDIARAHGGMLRLGKSERLGGLSADIVIAR
Specific function: Member of the two-component regulatory system envZ/ompR involved in the regulation of osmoregulation (genes ompF and ompC). EnvZ functions as a membrane-associated protein kinase that phosphorylates ompR in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789808, Length=447, Percent_Identity=31.7673378076063, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1787894, Length=277, Percent_Identity=32.4909747292419, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1790346, Length=260, Percent_Identity=31.5384615384615, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI1790551, Length=287, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI87082128, Length=285, Percent_Identity=29.1228070175439, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787374, Length=334, Percent_Identity=27.2455089820359, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1788393, Length=269, Percent_Identity=26.7657992565056, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786600, Length=226, Percent_Identity=28.7610619469027, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790861, Length=302, Percent_Identity=27.8145695364238, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI87081816, Length=229, Percent_Identity=25.764192139738, Blast_Score=62, Evalue=8e-11, Organism=Escherichia coli, GI1786783, Length=230, Percent_Identity=27.8260869565217, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 48791; Mature: 48791
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFGWLKQYMPRSLYVRAVLILLLPVVFLQLVVTVLFLTRHFEDVTQQMVTAVSREILLV CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE LDIVDTAPDAGSVPTQVVAQASQLALTATPVSPDAVPSQMLRHWYDFSGRVIVARLPSRV EEEHHCCCCCCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECHHHH AQIETIDLLNDQRVHVYAQTRHGPVRISFDRDRVSAKNPHQLFVNMIFFGGLVTVIAILY HHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LRNQLRPIKRLARAAEAFGRGRHEPYTPAGASEVRAAGNAFLDMRNRIERQIEQRTLMLS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVSHDLRTPLTRMRLSLSMLEDAERIPLEQDVNDMQEMLDAFLSFAKGEGEGEPEAVDPR CCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHH ALVSAVVEDAKRAGRDVTLVAQEGEGTGTVQLNVLAIRRALDNLISNAVRYGTRAQVSVL HHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEE LTDKTLRLRVEDDGPGIPEKRRAEATRPFTRLDAARNQDQGSGVGLGLAITSDIARAHGG EECCEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCC MLRLGKSERLGGLSADIVIAR EEEECCCCCCCCCCCCEEEEC >Mature Secondary Structure MFFGWLKQYMPRSLYVRAVLILLLPVVFLQLVVTVLFLTRHFEDVTQQMVTAVSREILLV CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE LDIVDTAPDAGSVPTQVVAQASQLALTATPVSPDAVPSQMLRHWYDFSGRVIVARLPSRV EEEHHCCCCCCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECHHHH AQIETIDLLNDQRVHVYAQTRHGPVRISFDRDRVSAKNPHQLFVNMIFFGGLVTVIAILY HHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LRNQLRPIKRLARAAEAFGRGRHEPYTPAGASEVRAAGNAFLDMRNRIERQIEQRTLMLS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVSHDLRTPLTRMRLSLSMLEDAERIPLEQDVNDMQEMLDAFLSFAKGEGEGEPEAVDPR CCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHH ALVSAVVEDAKRAGRDVTLVAQEGEGTGTVQLNVLAIRRALDNLISNAVRYGTRAQVSVL HHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEE LTDKTLRLRVEDDGPGIPEKRRAEATRPFTRLDAARNQDQGSGVGLGLAITSDIARAHGG EECCEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCC MLRLGKSERLGGLSADIVIAR EEEECCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6292200; 2997120; 9278503; 8132603; 2277041; 2824492; 1323560; 9817206; 10426948 [H]