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The map label for this gene is cheD [H]

Identifier: 110679514

GI number: 110679514

Start: 2149793

End: 2150308

Strand: Direct

Name: cheD [H]

Synonym: RD1_2245

Alternate gene names: 110679514

Gene position: 2149793-2150308 (Clockwise)

Preceding gene: 110679513

Following gene: 110679517

Centisome position: 52.01

GC content: 51.94

Gene sequence:

>516_bases
ATGACAAAAAACCGTCAACATATAACTCAGGGTGAACGTGCGGTTTCCGCTGATCCTGATCGGGCAATCTCCACAATTCT
AGGGTCTTGCGTTTCATGCTGTCTGTGGGACCCGGTGGCCAAGGTAGGTGGTATGAACCACATGCTTTTGACCGTCAGCA
CCAGAAGCTCGGGTGTTTGCAATCTGGCGGGTATCAACGCGATGGAATTGTTGATCAACGATATTCTGAAACTTGGCGGC
GAACGGCGTCGCCTGCGTGCAAAGGCCTTTGGCGGTGCGCGTATGGTTGCCGGTCTGAGTGATATCGGCTTGCTGAACAG
TCAGTTCACACTGGATTTTCTTCGAAAAGAAGGGATTGACTGTGAAGGACATTCACTCGGCGGAGACTCGGCGCGACACA
TCATGTTCTGGCCCACATCAGGCCGTGTCATGCAAAAAGTAAGAGCGGACGAAGTGCTACCCAAAGAAGTACCCGTACCG
TCCCAGCCAAGTGGAAACGATTTGGAACTGTTTTGA

Upstream 100 bases:

>100_bases
TCCAGCATCAACTGCCAATCCACAAAATCGGTGAAGCGCTGCGAGAGAGCAAGAACGCATCGGCACGAACAGCGCGCAGA
ACGACCAAGGTACCTTTGCA

Downstream 100 bases:

>100_bases
TAATGTGCTTTCAACGGTTGGCGCTCTTTGCCTGAACACGGTTGCGCATGTTACCGGTCGCGATAAGACGGAGAGTGCCG
AAGGGACGGAATGGTGAAAT

Product: chemotaxis protein CheD, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTKNRQHITQGERAVSADPDRAISTILGSCVSCCLWDPVAKVGGMNHMLLTVSTRSSGVCNLAGINAMELLINDILKLGG
ERRRLRAKAFGGARMVAGLSDIGLLNSQFTLDFLRKEGIDCEGHSLGGDSARHIMFWPTSGRVMQKVRADEVLPKEVPVP
SQPSGNDLELF

Sequences:

>Translated_171_residues
MTKNRQHITQGERAVSADPDRAISTILGSCVSCCLWDPVAKVGGMNHMLLTVSTRSSGVCNLAGINAMELLINDILKLGG
ERRRLRAKAFGGARMVAGLSDIGLLNSQFTLDFLRKEGIDCEGHSLGGDSARHIMFWPTSGRVMQKVRADEVLPKEVPVP
SQPSGNDLELF
>Mature_170_residues
TKNRQHITQGERAVSADPDRAISTILGSCVSCCLWDPVAKVGGMNHMLLTVSTRSSGVCNLAGINAMELLINDILKLGGE
RRRLRAKAFGGARMVAGLSDIGLLNSQFTLDFLRKEGIDCEGHSLGGDSARHIMFWPTSGRVMQKVRADEVLPKEVPVPS
QPSGNDLELF

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 18505; Mature: 18373

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNRQHITQGERAVSADPDRAISTILGSCVSCCLWDPVAKVGGMNHMLLTVSTRSSGVC
CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCE
NLAGINAMELLINDILKLGGERRRLRAKAFGGARMVAGLSDIGLLNSQFTLDFLRKEGID
ECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCHHHHHHCCCHHHHHHHHHCCCC
CEGHSLGGDSARHIMFWPTSGRVMQKVRADEVLPKEVPVPSQPSGNDLELF
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKNRQHITQGERAVSADPDRAISTILGSCVSCCLWDPVAKVGGMNHMLLTVSTRSSGVC
CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCE
NLAGINAMELLINDILKLGGERRRLRAKAFGGARMVAGLSDIGLLNSQFTLDFLRKEGID
ECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCHHHHHHCCCHHHHHHHHHCCCC
CEGHSLGGDSARHIMFWPTSGRVMQKVRADEVLPKEVPVPSQPSGNDLELF
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA