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The map label for this gene is ycbL [C]

Identifier: 110679516

GI number: 110679516

Start: 2153007

End: 2153933

Strand: Reverse

Name: ycbL [C]

Synonym: RD1_2249

Alternate gene names: 110679516

Gene position: 2153933-2153007 (Counterclockwise)

Preceding gene: 110679521

Following gene: 110679515

Centisome position: 52.11

GC content: 57.71

Gene sequence:

>927_bases
ATGACCATGGCAGATGATTTCGACCCGCCCATCGGCGTCCCGCAATCAATAGAGCCGGATATCCGCCGCATCCTCGCGCC
AAACCCATCCCCCATGACATATAGGGGAACCAATACGTATCTGCTTGGCAGTCGCGACATCGCGGTGATTGATCCCGGCC
CCGCCGATGACAGGCATCTCGACGCGATCCTGTCCTGCCTTTGCACGGGCCAACGCATCACCCATATCGTGGTCACGCAT
AGTCACCTCGATCATTCGCCTCTGGCGGCGCGATTGTCCGACCTGACCGCGGCACCCGTCTATGCGTTTGGCGGCTCTTT
TGCGGGTCGTTCCGCAATCATGCAAGACATGGCGGATTCCGGGCTGTCAGGCGGGGGTGAAGGCATGGATCTGGCCTTTT
CACCCCATATCTCGGTGGCAGATGGCGCGGTGATAGAGGGATCGGACTGGGTGTTGAATGTCATCCATACACCGGGTCAC
TTGGGAAATCACATCGCATTGGGGTTCGGGGACATCTGCTTTACGGGCGATCATGTCATGGGATGGGCCAGTTCGCTCGT
GTCTCCGCCTGACGGCGACCTGACCGACTTCATGGCCTCCTGTGCGCGCCTCAAACGCTATCCCTGGCGTCGCTTTTTAC
CGGGTCATGGCGATGTTATCGATGCCCCTCACGACCGGTTGGAATGGCTGATCACGCACAGAAATGCGAGGGAAGCTGCG
ATCCTTGATTTTCTGGACGATGGTCCGGCAGATGTGGAGAAGATCACGGATCACGTTTATCAGGACACGCCCGCCGCTCT
CATCCCGGCGGCACGGCGCAATGTGATAGCGCACCTCATTGATCTGAAAGGTAAATTCAAGGTCACCTTTACCGGTTCGC
TTGATTTCAAAACCCCGTTCAAACGGATCGACCGCCATCGACGATAA

Upstream 100 bases:

>100_bases
GAACCGCCCGCACATACAGGCTGCGCGGCATATATTGTTTGAGCCACCCAAAGAACATGCGGTAGACCCTAACGGTGCCC
CCCAGCATTAGAAAGACTGA

Downstream 100 bases:

>100_bases
ATTCCACATTTTCACAAAAAAGGCACTGGACGCATAATAAGAGCGCTGCTATATCGCCCAGACCGTTCCGGCGTAGCTCA
GCGGTAGAGCAGTTGACTGT

Product: metallo-beta-lactamase family protein, putative

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase Glyoxylase; Beta-Lactamase Family Protein; Beta-Lactamase-Like Protein; Beta-Lactamase; Metallo-Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Hydrolase; Hydroxyacylglutathione Hydrolase; Hydrolase Protein; Nudix Hydrolase; Zinc-Dependent Hydrolase; Hydrolase/Glyoxylase; NUDIX HydrolaseBeta-Lactamase-Like; Beta-Lactamase Class B; Zn-Dependent Hydrolase; Beta-Lactamase-Like Hydrolase

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTMADDFDPPIGVPQSIEPDIRRILAPNPSPMTYRGTNTYLLGSRDIAVIDPGPADDRHLDAILSCLCTGQRITHIVVTH
SHLDHSPLAARLSDLTAAPVYAFGGSFAGRSAIMQDMADSGLSGGGEGMDLAFSPHISVADGAVIEGSDWVLNVIHTPGH
LGNHIALGFGDICFTGDHVMGWASSLVSPPDGDLTDFMASCARLKRYPWRRFLPGHGDVIDAPHDRLEWLITHRNAREAA
ILDFLDDGPADVEKITDHVYQDTPAALIPAARRNVIAHLIDLKGKFKVTFTGSLDFKTPFKRIDRHRR

Sequences:

>Translated_308_residues
MTMADDFDPPIGVPQSIEPDIRRILAPNPSPMTYRGTNTYLLGSRDIAVIDPGPADDRHLDAILSCLCTGQRITHIVVTH
SHLDHSPLAARLSDLTAAPVYAFGGSFAGRSAIMQDMADSGLSGGGEGMDLAFSPHISVADGAVIEGSDWVLNVIHTPGH
LGNHIALGFGDICFTGDHVMGWASSLVSPPDGDLTDFMASCARLKRYPWRRFLPGHGDVIDAPHDRLEWLITHRNAREAA
ILDFLDDGPADVEKITDHVYQDTPAALIPAARRNVIAHLIDLKGKFKVTFTGSLDFKTPFKRIDRHRR
>Mature_307_residues
TMADDFDPPIGVPQSIEPDIRRILAPNPSPMTYRGTNTYLLGSRDIAVIDPGPADDRHLDAILSCLCTGQRITHIVVTHS
HLDHSPLAARLSDLTAAPVYAFGGSFAGRSAIMQDMADSGLSGGGEGMDLAFSPHISVADGAVIEGSDWVLNVIHTPGHL
GNHIALGFGDICFTGDHVMGWASSLVSPPDGDLTDFMASCARLKRYPWRRFLPGHGDVIDAPHDRLEWLITHRNAREAAI
LDFLDDGPADVEKITDHVYQDTPAALIPAARRNVIAHLIDLKGKFKVTFTGSLDFKTPFKRIDRHRR

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7705793, Length=256, Percent_Identity=29.296875, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17537503, Length=268, Percent_Identity=31.3432835820896, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI193205216, Length=268, Percent_Identity=31.3432835820896, Blast_Score=104, Evalue=6e-23,
Organism=Drosophila melanogaster, GI20129357, Length=294, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33522; Mature: 33391

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMADDFDPPIGVPQSIEPDIRRILAPNPSPMTYRGTNTYLLGSRDIAVIDPGPADDRHL
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCEEEECCCCEEEECCCCCCHHHH
DAILSCLCTGQRITHIVVTHSHLDHSPLAARLSDLTAAPVYAFGGSFAGRSAIMQDMADS
HHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHC
GLSGGGEGMDLAFSPHISVADGAVIEGSDWVLNVIHTPGHLGNHIALGFGDICFTGDHVM
CCCCCCCCCEEEECCCCEECCCCEEECCCEEEEEEECCCCCCCEEEEECCCEEEECCHHH
GWASSLVSPPDGDLTDFMASCARLKRYPWRRFLPGHGDVIDAPHDRLEWLITHRNAREAA
HHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCEECCCHHHHHEEEECCCCCHHH
ILDFLDDGPADVEKITDHVYQDTPAALIPAARRNVIAHLIDLKGKFKVTFTGSLDFKTPF
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHH
KRIDRHRR
HHHHCCCC
>Mature Secondary Structure 
TMADDFDPPIGVPQSIEPDIRRILAPNPSPMTYRGTNTYLLGSRDIAVIDPGPADDRHL
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCEEEECCCCEEEECCCCCCHHHH
DAILSCLCTGQRITHIVVTHSHLDHSPLAARLSDLTAAPVYAFGGSFAGRSAIMQDMADS
HHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHC
GLSGGGEGMDLAFSPHISVADGAVIEGSDWVLNVIHTPGHLGNHIALGFGDICFTGDHVM
CCCCCCCCCEEEECCCCEECCCCEEECCCEEEEEEECCCCCCCEEEEECCCEEEECCHHH
GWASSLVSPPDGDLTDFMASCARLKRYPWRRFLPGHGDVIDAPHDRLEWLITHRNAREAA
HHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCEECCCHHHHHEEEECCCCCHHH
ILDFLDDGPADVEKITDHVYQDTPAALIPAARRNVIAHLIDLKGKFKVTFTGSLDFKTPF
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHH
KRIDRHRR
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA