Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is suhB [H]

Identifier: 110679480

GI number: 110679480

Start: 2110796

End: 2111575

Strand: Direct

Name: suhB [H]

Synonym: RD1_2209

Alternate gene names: 110679480

Gene position: 2110796-2111575 (Clockwise)

Preceding gene: 110679479

Following gene: 110679485

Centisome position: 51.07

GC content: 58.97

Gene sequence:

>780_bases
GTGAACAATCGAAGTCAGGCAGCCGTTGAAATTGCGCGGATCGGGGGCGAACTGGCGCTGGAGTATTTTCGACGCCTCGG
ATCACTCGTGATCGAAGACAAGGGCCCGCAGGACTTTGTATCCGAGGCTGACAAAGCGGTTGAAACACATATTCGCAACC
TGATCACCGCCGCTTTCCCGGATGATGGGATCGTTGGTGAGGAGGATGCGCCAAAGCCATCCACGACGGGGTACACTTGG
GTCATTGACCCGATTGACGGGACCACAAATTTCATCTCCGGCATTCCGGCGTGGACGGTGGTGCTGGCTGTCGTGTGCGA
GGACAGCACGCAGATCGGTGTGATCTTTGATCCGGTGCATAACGAGATGTTCGTGGCCAATCGCGGTGCGGGGGCCACTC
TGAATGGTGCGCCCATGGCCTGTGCGAGCGATGCGCCGATTACCCGTGGGACCGTTGGCACCGGCTATTCAAGCCGGATT
TCCGCGCAGGCCTCTGCCGAGGTCGTGCTGGCCATTCTGGAAAAGGGTGGCGTGTTTCATCGCAATGCATCGGGCGCGCT
GTCGCTGGCCTATGTGGCGTCGGGACGGTTGCTTGGGTATATCGAAGAGCACATGAACGCCTGGGATTGTCTGGCCGGAC
AGCTGCTGATTGCCGAAGCCGGTGGGCAGATCGAGGATCAAAGCGCCAACCAGATGATTGCACAGGGTGGACGCGTGATC
GCTGGCGGAAGTGCGGTTTTCGATGACCTGTTGAAGATCGCGGATACCGCCTACAAGTAG

Upstream 100 bases:

>100_bases
CCGCCGAGTGATAAAATCTCTTTGATTTCAGCGGATAAACGGTGGACCAGAAGCCCATTCACTGTAAGGGTCGCACCAAT
TGTATTGAAGGAGAGTGACC

Downstream 100 bases:

>100_bases
CCTGCCGAGCACCGGGGCACGGTTTAGGGCGTCTGACGAAATACCTGAAACATCAAGAAGCACGTAACGTGTTGAAACCT
TTGTTTTCAGGCGGCGTTAC

Product: myo-inositol-1-monophosphotase

Products: NA

Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNNRSQAAVEIARIGGELALEYFRRLGSLVIEDKGPQDFVSEADKAVETHIRNLITAAFPDDGIVGEEDAPKPSTTGYTW
VIDPIDGTTNFISGIPAWTVVLAVVCEDSTQIGVIFDPVHNEMFVANRGAGATLNGAPMACASDAPITRGTVGTGYSSRI
SAQASAEVVLAILEKGGVFHRNASGALSLAYVASGRLLGYIEEHMNAWDCLAGQLLIAEAGGQIEDQSANQMIAQGGRVI
AGGSAVFDDLLKIADTAYK

Sequences:

>Translated_259_residues
MNNRSQAAVEIARIGGELALEYFRRLGSLVIEDKGPQDFVSEADKAVETHIRNLITAAFPDDGIVGEEDAPKPSTTGYTW
VIDPIDGTTNFISGIPAWTVVLAVVCEDSTQIGVIFDPVHNEMFVANRGAGATLNGAPMACASDAPITRGTVGTGYSSRI
SAQASAEVVLAILEKGGVFHRNASGALSLAYVASGRLLGYIEEHMNAWDCLAGQLLIAEAGGQIEDQSANQMIAQGGRVI
AGGSAVFDDLLKIADTAYK
>Mature_259_residues
MNNRSQAAVEIARIGGELALEYFRRLGSLVIEDKGPQDFVSEADKAVETHIRNLITAAFPDDGIVGEEDAPKPSTTGYTW
VIDPIDGTTNFISGIPAWTVVLAVVCEDSTQIGVIFDPVHNEMFVANRGAGATLNGAPMACASDAPITRGTVGTGYSSRI
SAQASAEVVLAILEKGGVFHRNASGALSLAYVASGRLLGYIEEHMNAWDCLAGQLLIAEAGGQIEDQSANQMIAQGGRVI
AGGSAVFDDLLKIADTAYK

Specific function: Unknown

COG id: COG0483

COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the inositol monophosphatase family [H]

Homologues:

Organism=Homo sapiens, GI5031789, Length=249, Percent_Identity=28.1124497991968, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI221625487, Length=249, Percent_Identity=28.1124497991968, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI7657236, Length=253, Percent_Identity=28.0632411067194, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI221625507, Length=136, Percent_Identity=33.0882352941176, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI1788882, Length=247, Percent_Identity=35.2226720647773, Blast_Score=151, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI193202570, Length=253, Percent_Identity=29.2490118577075, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI193202572, Length=247, Percent_Identity=29.1497975708502, Blast_Score=114, Evalue=6e-26,
Organism=Saccharomyces cerevisiae, GI6320493, Length=199, Percent_Identity=34.6733668341709, Blast_Score=99, Evalue=8e-22,
Organism=Saccharomyces cerevisiae, GI6321836, Length=244, Percent_Identity=27.8688524590164, Blast_Score=80, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24664926, Length=231, Percent_Identity=29.8701298701299, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24664922, Length=207, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24664918, Length=219, Percent_Identity=32.4200913242009, Blast_Score=107, Evalue=6e-24,
Organism=Drosophila melanogaster, GI21357957, Length=238, Percent_Identity=31.5126050420168, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI21357303, Length=221, Percent_Identity=29.8642533936652, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21357329, Length=216, Percent_Identity=29.1666666666667, Blast_Score=102, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020583
- InterPro:   IPR000760
- InterPro:   IPR020550
- InterPro:   IPR022337 [H]

Pfam domain/function: PF00459 Inositol_P [H]

EC number: =3.1.3.25 [H]

Molecular weight: Translated: 27171; Mature: 27171

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS00629 IMP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRSQAAVEIARIGGELALEYFRRLGSLVIEDKGPQDFVSEADKAVETHIRNLITAAFP
CCCCHHHHHHHHHHCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC
DDGIVGEEDAPKPSTTGYTWVIDPIDGTTNFISGIPAWTVVLAVVCEDSTQIGVIFDPVH
CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCC
NEMFVANRGAGATLNGAPMACASDAPITRGTVGTGYSSRISAQASAEVVLAILEKGGVFH
CEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCEEE
RNASGALSLAYVASGRLLGYIEEHMNAWDCLAGQLLIAEAGGQIEDQSANQMIAQGGRVI
ECCCCCEEEEEECCCHHHHHHHHHCCHHHHHHCEEEEEECCCCCCCHHHHHHHHCCCEEE
AGGSAVFDDLLKIADTAYK
ECCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNRSQAAVEIARIGGELALEYFRRLGSLVIEDKGPQDFVSEADKAVETHIRNLITAAFP
CCCCHHHHHHHHHHCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC
DDGIVGEEDAPKPSTTGYTWVIDPIDGTTNFISGIPAWTVVLAVVCEDSTQIGVIFDPVH
CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCC
NEMFVANRGAGATLNGAPMACASDAPITRGTVGTGYSSRISAQASAEVVLAILEKGGVFH
CEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCEEE
RNASGALSLAYVASGRLLGYIEEHMNAWDCLAGQLLIAEAGGQIEDQSANQMIAQGGRVI
ECCCCCEEEEEECCCHHHHHHHHHCCHHHHHHCEEEEEECCCCCCCHHHHHHHHCCCEEE
AGGSAVFDDLLKIADTAYK
ECCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]