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The map label for this gene is 110679479

Identifier: 110679479

GI number: 110679479

Start: 2110056

End: 2110676

Strand: Direct

Name: 110679479

Synonym: RD1_2208

Alternate gene names: NA

Gene position: 2110056-2110676 (Clockwise)

Preceding gene: 110679476

Following gene: 110679480

Centisome position: 51.05

GC content: 57.49

Gene sequence:

>621_bases
ATGGAAGAGAGTACAAATGCCGGAAAACGGGGCAGTTATCATCACGGGGATCTCAGGTCTCAACTGATCGAAGCCACGCG
CGCCCTGGTCGAGGAAAAAGGACCGGATCACTTTTCGGTATCCGAGGCCTGTCGCCGTGCCGGTGTGTCCACTGCGGCGC
CCTATAAACATTTCGCGGATAAAAGCGGCATGCTGCGCGCCGTCGCCATGGAAGGGATGGTGCGCCAGCGCGAACAGCTT
CTTGCCGAATTGCAGAAATACGAGCCCGGCACGTTGGGGCGCATCGTTGGTATGGGGCGGGTCTATGTCAATTTCGCGGT
GGCGGAACCGGGCGTTTTTCGGCTGATGTTTGGTCTGTCCGAAGATCACGGGGATCACAGCGATCTCGTGGCGATGGGCG
ATGATACGTTTCTGGTCGTCAAAAAAGAAGTGGCGCGCTGCCGCGGCGCGGATGAGGTGACGCCTGAGGACGAACATCAG
GCGTTCCTGTTGTGGAGTTTCGTACATGGTCTGTCGTTTTTGACCATAGACGGCAAGCTGACCGAAAAAAGAGTGACCGT
CGATCTGGAACATGTGCTGGAGGACATTGCCCGGCGGGTCGTGACCACAACCATAGGGTGA

Upstream 100 bases:

>100_bases
TTGGTCCGGTCATCTCAACTCTCACTCAAGTTAGCACCTCTAACATATGTTAGAACTTCTTACTTTGACAAGGGTTACGT
ATTCTGAAACAGAATGGATT

Downstream 100 bases:

>100_bases
TCGCGCCATCGGCAAGACCCCGCCGAGTGATAAAATCTCTTTGATTTCAGCGGATAAACGGTGGACCAGAAGCCCATTCA
CTGTAAGGGTCGCACCAATT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR; Transcriptional Regulator TetR-Family; AcrR Family Transcriptional Regulator; Transcription Regulator TetR Family Protein; TetR-Family Protein Transcriptional Regulator; Transcriptional Regulatory Protein; Regulatory Protein Tetr; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MEESTNAGKRGSYHHGDLRSQLIEATRALVEEKGPDHFSVSEACRRAGVSTAAPYKHFADKSGMLRAVAMEGMVRQREQL
LAELQKYEPGTLGRIVGMGRVYVNFAVAEPGVFRLMFGLSEDHGDHSDLVAMGDDTFLVVKKEVARCRGADEVTPEDEHQ
AFLLWSFVHGLSFLTIDGKLTEKRVTVDLEHVLEDIARRVVTTTIG

Sequences:

>Translated_206_residues
MEESTNAGKRGSYHHGDLRSQLIEATRALVEEKGPDHFSVSEACRRAGVSTAAPYKHFADKSGMLRAVAMEGMVRQREQL
LAELQKYEPGTLGRIVGMGRVYVNFAVAEPGVFRLMFGLSEDHGDHSDLVAMGDDTFLVVKKEVARCRGADEVTPEDEHQ
AFLLWSFVHGLSFLTIDGKLTEKRVTVDLEHVLEDIARRVVTTTIG
>Mature_206_residues
MEESTNAGKRGSYHHGDLRSQLIEATRALVEEKGPDHFSVSEACRRAGVSTAAPYKHFADKSGMLRAVAMEGMVRQREQL
LAELQKYEPGTLGRIVGMGRVYVNFAVAEPGVFRLMFGLSEDHGDHSDLVAMGDDTFLVVKKEVARCRGADEVTPEDEHQ
AFLLWSFVHGLSFLTIDGKLTEKRVTVDLEHVLEDIARRVVTTTIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22829; Mature: 22829

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEESTNAGKRGSYHHGDLRSQLIEATRALVEEKGPDHFSVSEACRRAGVSTAAPYKHFAD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHC
KSGMLRAVAMEGMVRQREQLLAELQKYEPGTLGRIVGMGRVYVNFAVAEPGVFRLMFGLS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEECCCCHHHHHHCCC
EDHGDHSDLVAMGDDTFLVVKKEVARCRGADEVTPEDEHQAFLLWSFVHGLSFLTIDGKL
CCCCCCCCEEEECCCEEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCC
TEKRVTVDLEHVLEDIARRVVTTTIG
CCHHHEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEESTNAGKRGSYHHGDLRSQLIEATRALVEEKGPDHFSVSEACRRAGVSTAAPYKHFAD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHC
KSGMLRAVAMEGMVRQREQLLAELQKYEPGTLGRIVGMGRVYVNFAVAEPGVFRLMFGLS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEECCCCHHHHHHCCC
EDHGDHSDLVAMGDDTFLVVKKEVARCRGADEVTPEDEHQAFLLWSFVHGLSFLTIDGKL
CCCCCCCCEEEECCCEEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCC
TEKRVTVDLEHVLEDIARRVVTTTIG
CCHHHEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA