| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is glo [H]
Identifier: 110679466
GI number: 110679466
Start: 2090813
End: 2091208
Strand: Reverse
Name: glo [H]
Synonym: RD1_2192
Alternate gene names: 110679466
Gene position: 2091208-2090813 (Counterclockwise)
Preceding gene: 110679467
Following gene: 110679465
Centisome position: 50.6
GC content: 54.29
Gene sequence:
>396_bases TTGGCCAAAGCCATTCATTCCATGATCCGGGTGCGTGACGAAAATGCGTCGGTTCGCTTTTACGATACCGCATTCGGGTT GAAAGTCGCAGACAGGCTGGATTTCACCAATTTCACGCTGCTTTATCTCAGCAATCCGGAAACCAGTTTCGAACTTGAAC TGACCGTCAACAAAGACCGCACCCAACCTTACGAGCTTGGCGAAGGCTATGGCCATCTGGCGGTGTCGGTCACGGATCTC GACAGCGAACATGCCCGATTTGAGGCCGCAGGCCTGTCACCGCGAAAGATCGTTGAATTTGCGCCCGATGGGGAGGTCAT CGCGCGCTTTTTCTTTGTGGCCGATCCGGATGGCTACGAGATCGAAGTGCTTGAGCGCGGTGGACGCTATCTGTAA
Upstream 100 bases:
>100_bases CAGACAGGCCAAAGAAAAAATACGGGGTAGTACGGGAATACTACCCAAGTCCTGCGGCCCTCCTGCACGATGTTCCATGT GAACAACGGGAGGGACCACT
Downstream 100 bases:
>100_bases TTCAAAGGGAGGATACCATGACAACCACAACCGGCCCGAAAGGGCTTACCCGACGCCAGCTATTGTCGCGTGCGACATCT GCGGGGGCTTCATTTGTTGT
Product: lactoylglutathione lyase, putative
Products: NA
Alternate protein names: Aldoketomutase; Glyoxalase I; Glx I; Ketone-aldehyde mutase; Methylglyoxalase; S-D-lactoylglutathione methylglyoxal lyase [H]
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MAKAIHSMIRVRDENASVRFYDTAFGLKVADRLDFTNFTLLYLSNPETSFELELTVNKDRTQPYELGEGYGHLAVSVTDL DSEHARFEAAGLSPRKIVEFAPDGEVIARFFFVADPDGYEIEVLERGGRYL
Sequences:
>Translated_131_residues MAKAIHSMIRVRDENASVRFYDTAFGLKVADRLDFTNFTLLYLSNPETSFELELTVNKDRTQPYELGEGYGHLAVSVTDL DSEHARFEAAGLSPRKIVEFAPDGEVIARFFFVADPDGYEIEVLERGGRYL >Mature_130_residues AKAIHSMIRVRDENASVRFYDTAFGLKVADRLDFTNFTLLYLSNPETSFELELTVNKDRTQPYELGEGYGHLAVSVTDLD SEHARFEAAGLSPRKIVEFAPDGEVIARFFFVADPDGYEIEVLERGGRYL
Specific function: Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione [H]
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glyoxalase I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR004361 - InterPro: IPR018146 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =4.4.1.5 [H]
Molecular weight: Translated: 14829; Mature: 14698
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAIHSMIRVRDENASVRFYDTAFGLKVADRLDFTNFTLLYLSNPETSFELELTVNKDR CCHHHHHHHEEECCCCCEEEEEEECCEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCC TQPYELGEGYGHLAVSVTDLDSEHARFEAAGLSPRKIVEFAPDGEVIARFFFVADPDGYE CCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCHHHEEEECCCCCEEEEEEEEECCCCCE IEVLERGGRYL EEEEECCCCCC >Mature Secondary Structure AKAIHSMIRVRDENASVRFYDTAFGLKVADRLDFTNFTLLYLSNPETSFELELTVNKDR CHHHHHHHEEECCCCCEEEEEEECCEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCC TQPYELGEGYGHLAVSVTDLDSEHARFEAAGLSPRKIVEFAPDGEVIARFFFVADPDGYE CCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCHHHEEEECCCCCEEEEEEEEECCCCCE IEVLERGGRYL EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]