| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679467
Identifier: 110679467
GI number: 110679467
Start: 2091316
End: 2091609
Strand: Reverse
Name: 110679467
Synonym: RD1_2193
Alternate gene names: NA
Gene position: 2091609-2091316 (Counterclockwise)
Preceding gene: 110679468
Following gene: 110679466
Centisome position: 50.61
GC content: 55.44
Gene sequence:
>294_bases ATGTGCGACGTTTTTGCCGGACAGGATCCGGAACGATATAGCTGCACCACGCGTCGGTTGCGGTTGAACGGGCAAAGCAC CAGCATCAGGCTGGAGAATGCCTTTTGGGAAGTGATTGACGAAATCGCGCAGAGCGAGGGCACAACCGCCCCCTGTTTCA TTTCAAAGCTGCACACCGAAGTTTTGGAAAAACGCGGGGAACCAAAGAATTTCACCTCACTGCTGCGCTGCGCCTGCCTG AAGTTCGCAGAGATGAACCCGGAGCGCAAAAGCCTGACGCTGGCTGCTGAATAG
Upstream 100 bases:
>100_bases AGGCAATAGACAATAATACCCATGATGTTTAACGTTAAAACCAAACATCCGACCGCCGGAACAACATCACTGGCGCAGCG GACCAATGGGAGGGCACCTT
Downstream 100 bases:
>100_bases CGGCTGCCAGACAGGCCAAAGAAAAAATACGGGGTAGTACGGGAATACTACCCAAGTCCTGCGGCCCTCCTGCACGATGT TCCATGTGAACAACGGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MCDVFAGQDPERYSCTTRRLRLNGQSTSIRLENAFWEVIDEIAQSEGTTAPCFISKLHTEVLEKRGEPKNFTSLLRCACL KFAEMNPERKSLTLAAE
Sequences:
>Translated_97_residues MCDVFAGQDPERYSCTTRRLRLNGQSTSIRLENAFWEVIDEIAQSEGTTAPCFISKLHTEVLEKRGEPKNFTSLLRCACL KFAEMNPERKSLTLAAE >Mature_97_residues MCDVFAGQDPERYSCTTRRLRLNGQSTSIRLENAFWEVIDEIAQSEGTTAPCFISKLHTEVLEKRGEPKNFTSLLRCACL KFAEMNPERKSLTLAAE
Specific function: Unknown
COG id: COG4321
COG function: function code R; Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11001; Mature: 11001
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDVFAGQDPERYSCTTRRLRLNGQSTSIRLENAFWEVIDEIAQSEGTTAPCFISKLHTE CCCCCCCCCCCCCCHHHHHEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VLEKRGEPKNFTSLLRCACLKFAEMNPERKSLTLAAE HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECC >Mature Secondary Structure MCDVFAGQDPERYSCTTRRLRLNGQSTSIRLENAFWEVIDEIAQSEGTTAPCFISKLHTE CCCCCCCCCCCCCCHHHHHEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VLEKRGEPKNFTSLLRCACLKFAEMNPERKSLTLAAE HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA