Click here to switch to the map view.

The map label for this gene is 110679465

Identifier: 110679465

GI number: 110679465

Start: 2090271

End: 2090795

Strand: Reverse

Name: 110679465

Synonym: RD1_2191

Alternate gene names: NA

Gene position: 2090795-2090271 (Counterclockwise)

Preceding gene: 110679466

Following gene: 110679464

Centisome position: 50.59

GC content: 58.48

Gene sequence:

>525_bases
ATGACAACCACAACCGGCCCGAAAGGGCTTACCCGACGCCAGCTATTGTCGCGTGCGACATCTGCGGGGGCTTCATTTGT
TGTCGGCGCGGGGTTTCTTGCCGCACCCGATGGGGCATGGGCGATGGAAACGAGCGAGCTGCAACCGGAAACCTTTGCGA
CGCTGGTGCAAATGGCGCGCGATATCTATCCGCATGACAAGGTGGGCGATGCCTTTTACGTGATCGCCGTGAAAGGCTAT
GACTCAGCCGAGGCCGCACAGGCAGTTGAGGATGGCATTGCCGCGCTCAACGCAGCGGCGGCCGGCAAAGGCTACGCCAG
TTACCTCGACATTGGCTGGGAACGCGACCGGGTCGACATCCTGCGCGGTATGGAGAACAGCGCGTTCTTTCAGCAGGTCC
GCGGCGGCCTTGTAACCGGGCTTTATAATCAGAAAGCGGTCTGGCCGATCTTTGGCTACGAGGGCTCTTCTTATGAATTC
GGTGGTTATATCGACCGCGGATTCAATGACATCAACTGGCTATAA

Upstream 100 bases:

>100_bases
AGGTCATCGCGCGCTTTTTCTTTGTGGCCGATCCGGATGGCTACGAGATCGAAGTGCTTGAGCGCGGTGGACGCTATCTG
TAATTCAAAGGGAGGATACC

Downstream 100 bases:

>100_bases
GGGAGACTAGGCACCATGACGGCACCTTTTGATCTCACGGACGACAGCGTTATTGTCGTGATCGGAACAGGCGCGGGCGG
CGGCGTTCTGGCAAATGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Tat Pathway Signal Sequence Domain-Containing Protein; Signal Peptide; Twin-Arginine Translocation Pathway Signal Peptide

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTTTTGPKGLTRRQLLSRATSAGASFVVGAGFLAAPDGAWAMETSELQPETFATLVQMARDIYPHDKVGDAFYVIAVKGY
DSAEAAQAVEDGIAALNAAAAGKGYASYLDIGWERDRVDILRGMENSAFFQQVRGGLVTGLYNQKAVWPIFGYEGSSYEF
GGYIDRGFNDINWL

Sequences:

>Translated_174_residues
MTTTTGPKGLTRRQLLSRATSAGASFVVGAGFLAAPDGAWAMETSELQPETFATLVQMARDIYPHDKVGDAFYVIAVKGY
DSAEAAQAVEDGIAALNAAAAGKGYASYLDIGWERDRVDILRGMENSAFFQQVRGGLVTGLYNQKAVWPIFGYEGSSYEF
GGYIDRGFNDINWL
>Mature_173_residues
TTTTGPKGLTRRQLLSRATSAGASFVVGAGFLAAPDGAWAMETSELQPETFATLVQMARDIYPHDKVGDAFYVIAVKGYD
SAEAAQAVEDGIAALNAAAAGKGYASYLDIGWERDRVDILRGMENSAFFQQVRGGLVTGLYNQKAVWPIFGYEGSSYEFG
GYIDRGFNDINWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18769; Mature: 18638

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTTGPKGLTRRQLLSRATSAGASFVVGAGFLAAPDGAWAMETSELQPETFATLVQMAR
CCCCCCCCCHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHH
DIYPHDKVGDAFYVIAVKGYDSAEAAQAVEDGIAALNAAAAGKGYASYLDIGWERDRVDI
HCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHH
LRGMENSAFFQQVRGGLVTGLYNQKAVWPIFGYEGSSYEFGGYIDRGFNDINWL
HHCCCCHHHHHHHHCCCEECCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTTTGPKGLTRRQLLSRATSAGASFVVGAGFLAAPDGAWAMETSELQPETFATLVQMAR
CCCCCCCCHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHH
DIYPHDKVGDAFYVIAVKGYDSAEAAQAVEDGIAALNAAAAGKGYASYLDIGWERDRVDI
HCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHH
LRGMENSAFFQQVRGGLVTGLYNQKAVWPIFGYEGSSYEFGGYIDRGFNDINWL
HHCCCCHHHHHHHHCCCEECCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA