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The map label for this gene is ipuC [H]

Identifier: 110679447

GI number: 110679447

Start: 2070169

End: 2071533

Strand: Reverse

Name: ipuC [H]

Synonym: RD1_2173

Alternate gene names: 110679447

Gene position: 2071533-2070169 (Counterclockwise)

Preceding gene: 110679448

Following gene: 110679446

Centisome position: 50.12

GC content: 60.15

Gene sequence:

>1365_bases
ATGCCCGGCACCCTCAGCTTTGATGATCTGAAATCGCGCGTCACCGACGGCAGCATCGACACGGTACTGGCCTGTTTTCC
CGACATGCAGGGCCGCCTGATGGGCAAGCGCTTTCACGCGGTCAACTTCGTGGAAACGTCCTTCAAGGAGACCCACTGCT
GCAACTACCTGCTGGCCACGGATCTTGAGATGGCAACGCCCGATGGCTATGCCGCCAGCAGTTGGCAGGGCGGCTATGGC
GATTATGTCATGCAGCCCGATCTGGACACGATCCGGCCCGTGCCATGGCTGGAGGGCACCGCAATGGTGCTTTGTGACAT
TCTCGATCACCATACCCATGCCGAGGTGCCCCATTCGCCGCGCGCGATGCTGAAAAAGCAGATCGCCCGGCTGAAAGCGC
TTGGCTTTGACGCGATGATGGCCACCGAGCTCGAGTTTTTCCTGTTTGAGAAATCCTTTGATGATATTCGAAAGAGCGGT
TTTCGCGATATGGCCCCGATCAGCGGCTATAACGAGGACTACCACATCTTCCAGACCACCAAGGAAGAAGGGGTCATGCG
GCCCATCCGCAACCATCTATACGCGGCTGGCCTGCCGATCGAAAACACCAAGGGTGAGGCCGAGGCGGGGCAGGAAGAGC
TGAACATCCGCTATTCAGAGGCGTTGCTCTGTGCCGATCACCACACCATCGCAAAAAACGCCATAAAGGAAATCGCATGG
GCGCAGGGTCACGCCGCGACCTTCCTGCCCAAGTGGCACCATGACCGCGTGGGCAGTTCCAGCCATGTCCACCAATCGCT
GTGGCAGGATGGCACGCCGGTCTTTGTTGACGACGCCGACCCGCTGGGCATGTCGGAGCTGATGAAAAACTATATGGCCG
GGTTGATTGCCTATGCACCGGATTACACGTTCTTTCTGGCCCCCTACATCAACAGCTACAAACGTTTTGCCAAGGGGACC
TTTGCGCCCACGAAAACCGTCTGGTCCGTGGACAACCGGACTGCGGGCTTTCGCCTGTGCGGCGAGCGCACCAAGGGCGT
GCGCGTGGAGTGTCGCATCGGTGGCTCGGACCTGAACCCGTACCTTGCGCAGGCCGCGATGCTGGCCGCAGGGATCAAGG
GGATTGAAGACAAGATGCCCCTGCCCGCCCCCACCACCGGCGACGTCTATGAAGACGCCAAAGCCGCCGATATCCCGCAA
ACCCTGCGCGCGGCCACGCAAACCCTGCGCGACTCTGCCATGCTGCGCGCGGCCATGGGCGACGATGTGGTCGACCACTA
CACCCGCTGCGCAGAGTGGGAACAAGAAGAATTTGACCGTATCGTGACCGACTGGGAAGTCGCGCGCGGATTTGAAAGGG
CCTGA

Upstream 100 bases:

>100_bases
ACATGTTGAAAGCGGGTCGTCCCTACCGCTATACGTGACGTCGTGCGGGGCGGCTTTGTGGTCGCCCCCATGCCCCCCCT
TTTCACGAAAGAGCAGACTT

Downstream 100 bases:

>100_bases
GCCATGATCACCTGTATCTCCCCCATTGATGGCAGCGTCTATGCCCAGCGCCCGACCCTGAGCGCCGAGGACGCAGAAGC
CGCCGTGGCCCGCGCGCGGG

Product: gamma-glutamylisopropylamide synthetase, putative

Products: NA

Alternate protein names: GS; Glutamate--ammonia ligase [H]

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MPGTLSFDDLKSRVTDGSIDTVLACFPDMQGRLMGKRFHAVNFVETSFKETHCCNYLLATDLEMATPDGYAASSWQGGYG
DYVMQPDLDTIRPVPWLEGTAMVLCDILDHHTHAEVPHSPRAMLKKQIARLKALGFDAMMATELEFFLFEKSFDDIRKSG
FRDMAPISGYNEDYHIFQTTKEEGVMRPIRNHLYAAGLPIENTKGEAEAGQEELNIRYSEALLCADHHTIAKNAIKEIAW
AQGHAATFLPKWHHDRVGSSSHVHQSLWQDGTPVFVDDADPLGMSELMKNYMAGLIAYAPDYTFFLAPYINSYKRFAKGT
FAPTKTVWSVDNRTAGFRLCGERTKGVRVECRIGGSDLNPYLAQAAMLAAGIKGIEDKMPLPAPTTGDVYEDAKAADIPQ
TLRAATQTLRDSAMLRAAMGDDVVDHYTRCAEWEQEEFDRIVTDWEVARGFERA

Sequences:

>Translated_454_residues
MPGTLSFDDLKSRVTDGSIDTVLACFPDMQGRLMGKRFHAVNFVETSFKETHCCNYLLATDLEMATPDGYAASSWQGGYG
DYVMQPDLDTIRPVPWLEGTAMVLCDILDHHTHAEVPHSPRAMLKKQIARLKALGFDAMMATELEFFLFEKSFDDIRKSG
FRDMAPISGYNEDYHIFQTTKEEGVMRPIRNHLYAAGLPIENTKGEAEAGQEELNIRYSEALLCADHHTIAKNAIKEIAW
AQGHAATFLPKWHHDRVGSSSHVHQSLWQDGTPVFVDDADPLGMSELMKNYMAGLIAYAPDYTFFLAPYINSYKRFAKGT
FAPTKTVWSVDNRTAGFRLCGERTKGVRVECRIGGSDLNPYLAQAAMLAAGIKGIEDKMPLPAPTTGDVYEDAKAADIPQ
TLRAATQTLRDSAMLRAAMGDDVVDHYTRCAEWEQEEFDRIVTDWEVARGFERA
>Mature_453_residues
PGTLSFDDLKSRVTDGSIDTVLACFPDMQGRLMGKRFHAVNFVETSFKETHCCNYLLATDLEMATPDGYAASSWQGGYGD
YVMQPDLDTIRPVPWLEGTAMVLCDILDHHTHAEVPHSPRAMLKKQIARLKALGFDAMMATELEFFLFEKSFDDIRKSGF
RDMAPISGYNEDYHIFQTTKEEGVMRPIRNHLYAAGLPIENTKGEAEAGQEELNIRYSEALLCADHHTIAKNAIKEIAWA
QGHAATFLPKWHHDRVGSSSHVHQSLWQDGTPVFVDDADPLGMSELMKNYMAGLIAYAPDYTFFLAPYINSYKRFAKGTF
APTKTVWSVDNRTAGFRLCGERTKGVRVECRIGGSDLNPYLAQAAMLAAGIKGIEDKMPLPAPTTGDVYEDAKAADIPQT
LRAATQTLRDSAMLRAAMGDDVVDHYTRCAEWEQEEFDRIVTDWEVARGFERA

Specific function: Unknown

COG id: COG0174

COG function: function code E; Glutamine synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine synthetase family [H]

Homologues:

Organism=Homo sapiens, GI221307485, Length=363, Percent_Identity=25.3443526170799, Blast_Score=124, Evalue=2e-28,
Organism=Escherichia coli, GI87081870, Length=336, Percent_Identity=28.5714285714286, Blast_Score=139, Evalue=5e-34,
Organism=Escherichia coli, GI1790301, Length=452, Percent_Identity=27.6548672566372, Blast_Score=126, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008147
- InterPro:   IPR014746
- InterPro:   IPR008146
- InterPro:   IPR004809 [H]

Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]

EC number: =6.3.1.2 [H]

Molecular weight: Translated: 50762; Mature: 50631

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGTLSFDDLKSRVTDGSIDTVLACFPDMQGRLMGKRFHAVNFVETSFKETHCCNYLLAT
CCCCCCHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
DLEMATPDGYAASSWQGGYGDYVMQPDLDTIRPVPWLEGTAMVLCDILDHHTHAEVPHSP
CCHHCCCCCCCCCCCCCCCCCEEECCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH
RAMLKKQIARLKALGFDAMMATELEFFLFEKSFDDIRKSGFRDMAPISGYNEDYHIFQTT
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECC
KEEGVMRPIRNHLYAAGLPIENTKGEAEAGQEELNIRYSEALLCADHHTIAKNAIKEIAW
HHHHHHHHHHHHHEECCCCCCCCCCCHHCCHHHHCEEHHHEEEECCCHHHHHHHHHHHHH
AQGHAATFLPKWHHDRVGSSSHVHQSLWQDGTPVFVDDADPLGMSELMKNYMAGLIAYAP
HCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCC
DYTFFLAPYINSYKRFAKGTFAPTKTVWSVDNRTAGFRLCGERTKGVRVECRIGGSDLNP
CCCEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCCCCCEEEEEEECCCCCCH
YLAQAAMLAAGIKGIEDKMPLPAPTTGDVYEDAKAADIPQTLRAATQTLRDSAMLRAAMG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
DDVVDHYTRCAEWEQEEFDRIVTDWEVARGFERA
CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PGTLSFDDLKSRVTDGSIDTVLACFPDMQGRLMGKRFHAVNFVETSFKETHCCNYLLAT
CCCCCHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
DLEMATPDGYAASSWQGGYGDYVMQPDLDTIRPVPWLEGTAMVLCDILDHHTHAEVPHSP
CCHHCCCCCCCCCCCCCCCCCEEECCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH
RAMLKKQIARLKALGFDAMMATELEFFLFEKSFDDIRKSGFRDMAPISGYNEDYHIFQTT
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECC
KEEGVMRPIRNHLYAAGLPIENTKGEAEAGQEELNIRYSEALLCADHHTIAKNAIKEIAW
HHHHHHHHHHHHHEECCCCCCCCCCCHHCCHHHHCEEHHHEEEECCCHHHHHHHHHHHHH
AQGHAATFLPKWHHDRVGSSSHVHQSLWQDGTPVFVDDADPLGMSELMKNYMAGLIAYAP
HCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCC
DYTFFLAPYINSYKRFAKGTFAPTKTVWSVDNRTAGFRLCGERTKGVRVECRIGGSDLNP
CCCEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCCCCCEEEEEEECCCCCCH
YLAQAAMLAAGIKGIEDKMPLPAPTTGDVYEDAKAADIPQTLRAATQTLRDSAMLRAAMG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
DDVVDHYTRCAEWEQEEFDRIVTDWEVARGFERA
CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1348781; 10360571 [H]