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The map label for this gene is 110679448

Identifier: 110679448

GI number: 110679448

Start: 2071596

End: 2072627

Strand: Reverse

Name: 110679448

Synonym: RD1_2174

Alternate gene names: NA

Gene position: 2072627-2071596 (Counterclockwise)

Preceding gene: 110679449

Following gene: 110679447

Centisome position: 50.15

GC content: 60.47

Gene sequence:

>1032_bases
ATGACAACCAGACGTAAGTTTATCCAAGGGGCCGCCGTGGCCGCCCCCGCCGCCCTCGCGGCCCCCGCAATTGCGCAGGG
CACGATCACATGGCGCATGCAGACCTATGCCGGGGCTGCCCTGGCCGAACATGTGATCGACCCGGCCATCGAGATGTTCA
ACAAGATCGCGGGCGACCGGATGCAGATCGAGCTGTTTTATGCCGACCAACTGGTCCCCACGGGCGAATTGTTTCAGGCC
CTGCAACGCGGCACCATCGACGCCGTGCAGTCAGATGATGACTCCATGGCCTCCCCGACCGAAGTCACGGTGTTCGGCGG
CTATTTCCCGTTCGGATCGCGCTACAGCCTCGATGTGCCGGTGCTGTTCAACCAGTACGGCCTGAACGAGATCTGGGACG
AGGAATATTCCGCCGTCGGCGTCAAACATATCTCTGCGGGTGCGTGGGATCCGTGCCATTTTGCGACCAAGGACCCCATT
CGCAGCCTCGAAGACCTCAAGGGCAAGCGCGTCTTTACCTTCCCCACGGCGGGCCGCTTCATGTCGCAGTTCGGCGTGGT
CCCTGTGAACCTGCCATGGGAAGACATCGAGGTCGCCTTGCAAACGGGCGAGTTGGATGGCATCGCGTGGTCGGGCATCA
CCGAAGATTACACCGTCGGCTGGGCGGATGTGACCAACTACTTCCTGACCAACAACATCTCCGGTGCCTGGGCCGGGTCG
TTCTTTGCCAATATGGAACGCTGGAACGAGTTGCCCGAGGACCTGCAGACATTGTTCCGGGTCTGCTGCGATCAGTCCCA
TTACTACCGCCAGTGGTGGTATTGGGGCGGCGAGGCAAACCTGCGCGTCAACGGCACCAAGCTGGAACTGACCACCATCC
CCGACGAGGAATGGGCCACGGTCGAAAACGCAGCGCTGGAATTCTGGGAAGAGATCGCAGCCGAATCCGACGTCAAACGC
CGCGTGGTGGATATCTTCAAACAGTATAACGCCGACATGTTGAAAGCGGGTCGTCCCTACCGCTATACGTGA

Upstream 100 bases:

>100_bases
GCTTTTTCCCGGCCTTGCGCTTTGGCTGCCGGAGTATGTTTATGGAAATTAACCAACCAAGATCAGGCCAACCTGACATA
ACCCAATAAGGAGAACCACT

Downstream 100 bases:

>100_bases
CGTCGTGCGGGGCGGCTTTGTGGTCGCCCCCATGCCCCCCCTTTTCACGAAAGAGCAGACTTATGCCCGGCACCCTCAGC
TTTGATGATCTGAAATCGCG

Product: periplasmic mannitol-binding protein, putative

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP Dicarboxylate Transporter DctP Subunit; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; TRAP Dicarboxylate Transporter

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MTTRRKFIQGAAVAAPAALAAPAIAQGTITWRMQTYAGAALAEHVIDPAIEMFNKIAGDRMQIELFYADQLVPTGELFQA
LQRGTIDAVQSDDDSMASPTEVTVFGGYFPFGSRYSLDVPVLFNQYGLNEIWDEEYSAVGVKHISAGAWDPCHFATKDPI
RSLEDLKGKRVFTFPTAGRFMSQFGVVPVNLPWEDIEVALQTGELDGIAWSGITEDYTVGWADVTNYFLTNNISGAWAGS
FFANMERWNELPEDLQTLFRVCCDQSHYYRQWWYWGGEANLRVNGTKLELTTIPDEEWATVENAALEFWEEIAAESDVKR
RVVDIFKQYNADMLKAGRPYRYT

Sequences:

>Translated_343_residues
MTTRRKFIQGAAVAAPAALAAPAIAQGTITWRMQTYAGAALAEHVIDPAIEMFNKIAGDRMQIELFYADQLVPTGELFQA
LQRGTIDAVQSDDDSMASPTEVTVFGGYFPFGSRYSLDVPVLFNQYGLNEIWDEEYSAVGVKHISAGAWDPCHFATKDPI
RSLEDLKGKRVFTFPTAGRFMSQFGVVPVNLPWEDIEVALQTGELDGIAWSGITEDYTVGWADVTNYFLTNNISGAWAGS
FFANMERWNELPEDLQTLFRVCCDQSHYYRQWWYWGGEANLRVNGTKLELTTIPDEEWATVENAALEFWEEIAAESDVKR
RVVDIFKQYNADMLKAGRPYRYT
>Mature_342_residues
TTRRKFIQGAAVAAPAALAAPAIAQGTITWRMQTYAGAALAEHVIDPAIEMFNKIAGDRMQIELFYADQLVPTGELFQAL
QRGTIDAVQSDDDSMASPTEVTVFGGYFPFGSRYSLDVPVLFNQYGLNEIWDEEYSAVGVKHISAGAWDPCHFATKDPIR
SLEDLKGKRVFTFPTAGRFMSQFGVVPVNLPWEDIEVALQTGELDGIAWSGITEDYTVGWADVTNYFLTNNISGAWAGSF
FANMERWNELPEDLQTLFRVCCDQSHYYRQWWYWGGEANLRVNGTKLELTTIPDEEWATVENAALEFWEEIAAESDVKRR
VVDIFKQYNADMLKAGRPYRYT

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38649; Mature: 38517

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRRKFIQGAAVAAPAALAAPAIAQGTITWRMQTYAGAALAEHVIDPAIEMFNKIAGDR
CCCHHHHHHCHHHHCCHHHHCCHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
MQIELFYADQLVPTGELFQALQRGTIDAVQSDDDSMASPTEVTVFGGYFPFGSRYSLDVP
EEEEEEEECCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCEEECCC
VLFNQYGLNEIWDEEYSAVGVKHISAGAWDPCHFATKDPIRSLEDLKGKRVFTFPTAGRF
CCCCCCCCHHHHHHHHHHHCHHEECCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCHHHH
MSQFGVVPVNLPWEDIEVALQTGELDGIAWSGITEDYTVGWADVTNYFLTNNISGAWAGS
HHHCCCEEECCCHHHHHEEEECCCCCCEEECCCCCCCEECHHHHHHHHHHCCCCCCHHHH
FFANMERWNELPEDLQTLFRVCCDQSHYYRQWWYWGGEANLRVNGTKLELTTIPDEEWAT
HHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECEEEEEEECCCCHHHH
VENAALEFWEEIAAESDVKRRVVDIFKQYNADMLKAGRPYRYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC
>Mature Secondary Structure 
TTRRKFIQGAAVAAPAALAAPAIAQGTITWRMQTYAGAALAEHVIDPAIEMFNKIAGDR
CCHHHHHHCHHHHCCHHHHCCHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
MQIELFYADQLVPTGELFQALQRGTIDAVQSDDDSMASPTEVTVFGGYFPFGSRYSLDVP
EEEEEEEECCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCEEECCC
VLFNQYGLNEIWDEEYSAVGVKHISAGAWDPCHFATKDPIRSLEDLKGKRVFTFPTAGRF
CCCCCCCCHHHHHHHHHHHCHHEECCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCHHHH
MSQFGVVPVNLPWEDIEVALQTGELDGIAWSGITEDYTVGWADVTNYFLTNNISGAWAGS
HHHCCCEEECCCHHHHHEEEECCCCCCEEECCCCCCCEECHHHHHHHHHHCCCCCCHHHH
FFANMERWNELPEDLQTLFRVCCDQSHYYRQWWYWGGEANLRVNGTKLELTTIPDEEWAT
HHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECEEEEEEECCCCHHHH
VENAALEFWEEIAAESDVKRRVVDIFKQYNADMLKAGRPYRYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA