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The map label for this gene is 110679426

Identifier: 110679426

GI number: 110679426

Start: 2049211

End: 2049816

Strand: Reverse

Name: 110679426

Synonym: RD1_2152

Alternate gene names: NA

Gene position: 2049816-2049211 (Counterclockwise)

Preceding gene: 110679434

Following gene: 110679424

Centisome position: 49.6

GC content: 59.08

Gene sequence:

>606_bases
ATGTTCTACCGTCCGCAAGAAGGCCACGGCCTGCCGCATAACCCCTTCAACGCCATCGTGTCGCCGCGCCCCATCGGATG
GATTTCAACGCGTGATGAGGCGGGGGCGAACAACCTTGCACCCTACTCCTTTTTCAATGCGGTGGCCTATGTGCCCCCCC
AGGTGATGTTCGCCTCGACATCGGCCAAACCGGATCGCGACGACACCAAAGACTCCGTCGCCAATATCCGCGAAACCGGT
GTATTCTGCGTCAATATCGTCGAATATGACATGCGCAACGTGATGAATGCCTCATCGGAGGGCCTCGCGCGCGAGGTTGA
TGAATTCGAACACGCCGGTATCGCACCAACGCCCTGCCGCGACATCGACTGTGCGCGGGTCACGGGCGCACCGGCAGCGC
TGGAATGCCGTATGACGCAGATCGTCAAGATCGAAGGCGCACATAATTTCGTGGTGTTCGGTGAGGTCGTCGGCGTCCAC
ATCCGCGATGATACACTGATCAACGGCCGGTTCGACGTGACGACCTTCAATCCGCTCAGCAGGATGGGCTACCGCGACTA
CACCAAGGTAAGTGAGGTTTTCGAACTGTCGCGGCCCGACGACTAA

Upstream 100 bases:

>100_bases
TATACACAGGAATAAAGGGCCGTTTGGGGATTGCATCGTGTTTCAGGTGGTCCGGCCCTATCACATGGGATATGCCGCCT
GCAAACCATCAGGAGTGATC

Downstream 100 bases:

>100_bases
GCACCATCGCAATCGGATTCACGCGGTTTCCCACGCTCCACGGCTGTGGGACGGTGGGTGGGGCGCATTGGCCAAGGGCC
AACAGCGCCGCCAAACCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MFYRPQEGHGLPHNPFNAIVSPRPIGWISTRDEAGANNLAPYSFFNAVAYVPPQVMFASTSAKPDRDDTKDSVANIRETG
VFCVNIVEYDMRNVMNASSEGLAREVDEFEHAGIAPTPCRDIDCARVTGAPAALECRMTQIVKIEGAHNFVVFGEVVGVH
IRDDTLINGRFDVTTFNPLSRMGYRDYTKVSEVFELSRPDD

Sequences:

>Translated_201_residues
MFYRPQEGHGLPHNPFNAIVSPRPIGWISTRDEAGANNLAPYSFFNAVAYVPPQVMFASTSAKPDRDDTKDSVANIRETG
VFCVNIVEYDMRNVMNASSEGLAREVDEFEHAGIAPTPCRDIDCARVTGAPAALECRMTQIVKIEGAHNFVVFGEVVGVH
IRDDTLINGRFDVTTFNPLSRMGYRDYTKVSEVFELSRPDD
>Mature_201_residues
MFYRPQEGHGLPHNPFNAIVSPRPIGWISTRDEAGANNLAPYSFFNAVAYVPPQVMFASTSAKPDRDDTKDSVANIRETG
VFCVNIVEYDMRNVMNASSEGLAREVDEFEHAGIAPTPCRDIDCARVTGAPAALECRMTQIVKIEGAHNFVVFGEVVGVH
IRDDTLINGRFDVTTFNPLSRMGYRDYTKVSEVFELSRPDD

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 22319; Mature: 22319

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYRPQEGHGLPHNPFNAIVSPRPIGWISTRDEAGANNLAPYSFFNAVAYVPPQVMFAST
CCCCCCCCCCCCCCCHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECC
SAKPDRDDTKDSVANIRETGVFCVNIVEYDMRNVMNASSEGLAREVDEFEHAGIAPTPCR
CCCCCCCCCHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
DIDCARVTGAPAALECRMTQIVKIEGAHNFVVFGEVVGVHIRDDTLINGRFDVTTFNPLS
CCCCCEECCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEEECCCEEECCEEEEEECCHHH
RMGYRDYTKVSEVFELSRPDD
HCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFYRPQEGHGLPHNPFNAIVSPRPIGWISTRDEAGANNLAPYSFFNAVAYVPPQVMFAST
CCCCCCCCCCCCCCCHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECC
SAKPDRDDTKDSVANIRETGVFCVNIVEYDMRNVMNASSEGLAREVDEFEHAGIAPTPCR
CCCCCCCCCHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
DIDCARVTGAPAALECRMTQIVKIEGAHNFVVFGEVVGVHIRDDTLINGRFDVTTFNPLS
CCCCCEECCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEEECCCEEECCEEEEEECCHHH
RMGYRDYTKVSEVFELSRPDD
HCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]