| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is mtnP [H]
Identifier: 110679424
GI number: 110679424
Start: 2046350
End: 2047222
Strand: Reverse
Name: mtnP [H]
Synonym: RD1_2150
Alternate gene names: 110679424
Gene position: 2047222-2046350 (Counterclockwise)
Preceding gene: 110679426
Following gene: 110679423
Centisome position: 49.53
GC content: 61.4
Gene sequence:
>873_bases ATGACCCAAACAAAAATAGCCGTGATCGGTGGATCCGGTCTTTATGATATAGAGGGTATGACCGGAGCGAAATGGACACA GGTGTCAACACCATGGGGCGCACCATCCGATGATATTCTGACCGGGGAACTTGATGGTGTTCCGATGGCCTTTTTACCAC GCCACGGACGCGGCCATGTGCATAGCCCCACCACAGTGCCCTACCGCGCAAATATCGACGCGCTCAAGCGGCTTGGGGTG ACAGATGTCATTTCGGTGTCGGCCTGCGGTTCCTTTCGCGAGGAAATGGCACCGGGTGATTTCGTCATCGTGGATCAGTT CATCGACCGCACCTTCGCGCGGGAAAAATCGTTCTTCGGCACAGGCTGCGTGGCACATGTCAGCGTCGCCCATCCGACCT GCCCCCGTCTGTCCAAAGCCTGCCACACGGCGGCCACCGATGCGGGCATCACGGTGCATGACGGTGGGACTTATCTGGCG ATGGAAGGCCCGCAGTTTTCGACCCTTGCGGAATCCAAGATGTACCGCACAAGCTGGGGCGCGGATGTGATCGGCATGAC CAACATGCCCGAAGCGAAACTCGCCCGCGAAGCCGAACTGTGTTACGCCTCGGTCGCGATGATCACCGATTACGACAGCT GGCACCCCGACCACGGCGAAGTCGATGTCACGCAGATCATCCAGACCCTGATGGGCAACGCGGATAAGGGCCGCGATCTG GTGCGCCGCCTGCCGGCGATGCTCGGGCCGGAGCGCGCACCCTGCCCCCACGGCTGCGATCGCGCGCTGGATTTCGCGAT CCTGACGCAACCCGACGCACGCGATCCGGCGGTCATGGCCAAGCTGGATGCCGTGGCCGGGCGCGTACTCTAA
Upstream 100 bases:
>100_bases CGCGCCCTTCACAACACCTTAATGAAACCGGGCGATTTGTGCCTTTTCAACCTGCGCTTCAACGGGCAAACTGCCGGCAA CGCACGAAAGGACAGCTTCA
Downstream 100 bases:
>100_bases TCCAAGGAATCCATGAAATGCCTCTCGACCTCTGGCTGACCTTTGTTGCAGCCTCCACCGCGCTCCTGCTGATCCCTGGC CCGACTGTGCTTTTGGTGCT
Product: 5'-methylthioadenosine phosphorylase
Products: NA
Alternate protein names: 5'-methylthioadenosine phosphorylase; MTA phosphorylase [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTQTKIAVIGGSGLYDIEGMTGAKWTQVSTPWGAPSDDILTGELDGVPMAFLPRHGRGHVHSPTTVPYRANIDALKRLGV TDVISVSACGSFREEMAPGDFVIVDQFIDRTFAREKSFFGTGCVAHVSVAHPTCPRLSKACHTAATDAGITVHDGGTYLA MEGPQFSTLAESKMYRTSWGADVIGMTNMPEAKLAREAELCYASVAMITDYDSWHPDHGEVDVTQIIQTLMGNADKGRDL VRRLPAMLGPERAPCPHGCDRALDFAILTQPDARDPAVMAKLDAVAGRVL
Sequences:
>Translated_290_residues MTQTKIAVIGGSGLYDIEGMTGAKWTQVSTPWGAPSDDILTGELDGVPMAFLPRHGRGHVHSPTTVPYRANIDALKRLGV TDVISVSACGSFREEMAPGDFVIVDQFIDRTFAREKSFFGTGCVAHVSVAHPTCPRLSKACHTAATDAGITVHDGGTYLA MEGPQFSTLAESKMYRTSWGADVIGMTNMPEAKLAREAELCYASVAMITDYDSWHPDHGEVDVTQIIQTLMGNADKGRDL VRRLPAMLGPERAPCPHGCDRALDFAILTQPDARDPAVMAKLDAVAGRVL >Mature_289_residues TQTKIAVIGGSGLYDIEGMTGAKWTQVSTPWGAPSDDILTGELDGVPMAFLPRHGRGHVHSPTTVPYRANIDALKRLGVT DVISVSACGSFREEMAPGDFVIVDQFIDRTFAREKSFFGTGCVAHVSVAHPTCPRLSKACHTAATDAGITVHDGGTYLAM EGPQFSTLAESKMYRTSWGADVIGMTNMPEAKLAREAELCYASVAMITDYDSWHPDHGEVDVTQIIQTLMGNADKGRDLV RRLPAMLGPERAPCPHGCDRALDFAILTQPDARDPAVMAKLDAVAGRVL
Specific function: Catalyzes the formation of methylthio-D-ribose 1- phosphate (MTR-1-P) from methylthioadenosine (MTA) [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI47132622, Length=273, Percent_Identity=44.6886446886447, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI71980569, Length=243, Percent_Identity=38.6831275720165, Blast_Score=164, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6323045, Length=303, Percent_Identity=36.3036303630363, Blast_Score=165, Evalue=8e-42, Organism=Drosophila melanogaster, GI20130079, Length=243, Percent_Identity=41.9753086419753, Blast_Score=185, Evalue=4e-47, Organism=Drosophila melanogaster, GI221459247, Length=244, Percent_Identity=34.8360655737705, Blast_Score=147, Evalue=5e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010044 - InterPro: IPR000845 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.28 [H]
Molecular weight: Translated: 31160; Mature: 31029
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTKIAVIGGSGLYDIEGMTGAKWTQVSTPWGAPSDDILTGELDGVPMAFLPRHGRGHV CCCCEEEEEECCCEEECCCCCCCCEEEECCCCCCCCCCEEECCCCCCCEEEECCCCCCCC HSPTTVPYRANIDALKRLGVTDVISVSACGSFREEMAPGDFVIVDQFIDRTFAREKSFFG CCCCCCCEECCHHHHHHCCCHHHEEHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCC TGCVAHVSVAHPTCPRLSKACHTAATDAGITVHDGGTYLAMEGPQFSTLAESKMYRTSWG CCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCC ADVIGMTNMPEAKLAREAELCYASVAMITDYDSWHPDHGEVDVTQIIQTLMGNADKGRDL CCEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHHH VRRLPAMLGPERAPCPHGCDRALDFAILTQPDARDPAVMAKLDAVAGRVL HHHHHHHHCCCCCCCCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TQTKIAVIGGSGLYDIEGMTGAKWTQVSTPWGAPSDDILTGELDGVPMAFLPRHGRGHV CCCEEEEEECCCEEECCCCCCCCEEEECCCCCCCCCCEEECCCCCCCEEEECCCCCCCC HSPTTVPYRANIDALKRLGVTDVISVSACGSFREEMAPGDFVIVDQFIDRTFAREKSFFG CCCCCCCEECCHHHHHHCCCHHHEEHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCC TGCVAHVSVAHPTCPRLSKACHTAATDAGITVHDGGTYLAMEGPQFSTLAESKMYRTSWG CCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCC ADVIGMTNMPEAKLAREAELCYASVAMITDYDSWHPDHGEVDVTQIIQTLMGNADKGRDL CCEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHHH VRRLPAMLGPERAPCPHGCDRALDFAILTQPDARDPAVMAKLDAVAGRVL HHHHHHHHCCCCCCCCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA