The gene/protein map for NC_008209 is currently unavailable.
Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is 110679363

Identifier: 110679363

GI number: 110679363

Start: 1990255

End: 1991487

Strand: Direct

Name: 110679363

Synonym: RD1_2082

Alternate gene names: NA

Gene position: 1990255-1991487 (Clockwise)

Preceding gene: 110679362

Following gene: 110679364

Centisome position: 48.15

GC content: 57.02

Gene sequence:

>1233_bases
ATGGCCCGCTATGTTCCCCTTGCAGATGCACATCGCCTCCCGTTGTGGCGGCGGCCCATCGCCTTGTTGTTCCTGATGGC
GCTTGCGATGCCGATTGCGTTCAATACATGGTCTGCATTGCTGAACAACTTCGTGATTGAAGCCGCCAATTTTGACGGTT
CCGACATCGGTCTTTTGCACACGGTGCGCGAAATACCGGGGTTTCTGGCGGTCGGTGTCATCGCCATCATCATTTTCATG
CGCGAACAGGTGCTGGGGCTGGTGTCGCTGATCCTGCTCGGCGTTGCCACTGCGGTCACGGCGTGGTTCCCGTCCATGGG
CGGCATTCTGGCCATCACCATGCTGAGTTCGATCGGCTTTCACTATTACGAGACGGTCAATCAATCCCTGCAACTGCAAT
GGCTGAGCAAACAGGAAGCGCCGCGTGTCCTCGGCTGGCTGCTCGCGGCCGGATCAGGGGCCACGTTGATTGCCTATCTG
GCGATCATGGCGCTCTGGGACACTTTGGGGCTGTCCTACAATACGGTCTACATGGTGGGCGGTGGCATCACCGTCGTCCT
GGCAGTTTTTGCGATGCTTGCCTATCCGCAGTTCGAAGCCCCCAATCCGCAGATCAAGAAAATGGTGCTGCGCAAACGCT
ACTGGCTCTATTACGCGCTGCAGTTCATGTCCGGCGCACGGCGTCAGATTTTTGTGGTTTTTGCGGGTTTCATGATGGTC
GAGAAATTCGGCTATGATGTGCATGAGATCACGCTGCTCTATCTTATCAACCTTGTGGTCAACATGATGGTGGCCCCTTT
GCTGGGCCGTGCGGTGGGCTATTTTGGCGAACGGCGCACGCTCGGGTTTGAATACATCGGTCTGGTGCTGGTGTTCCTGT
GTTATGGTGGCGTTTACTATTTCAGCTGGGGCGTGGCAGTGGCGGCGACGCTTTATGTGCTGGATCACATTTTCTTTGGG
CTCGCGCTGGCGCTGAAAACCTATTTTCAGAAAATCGCCGATCCCGGTGACATCGCGCCGACCGCTGCCGTGGCCTTTAC
CATCAACCATATTGCGGCGGTCTTTCTGCCCGTGTCTTTTGGTCTGCTGTGGCTATGGTCCCCGGCGGCGGTGTTCTTTC
TGGCGGCGTCCATGGCGGCGGTGTCCTTTGTGCTGGCGATGATGATCCCGCGCCATCCCGAAAAAGGGTTTGAAACCATT
TTCGCGCGTGGCATCCCCACACCGGCAGAATGA

Upstream 100 bases:

>100_bases
TTCTACTGACCTTCACCGTCATCATGCGGGGCATCAGGGACATTGACGCGCCGCGAAATAGCACCTCGTCAAAGGCCAGC
AAAAGGACTAAGCAACCGGT

Downstream 100 bases:

>100_bases
GCACCGGTCGGTTCCTCACGGGATCGACCATGGGGCATGTTGTGCGCATGACGGCCACAGGGGCCTTCGGGATCACCTTC
GTTTTTCTCGTGGATGCGGC

Product: MFS protein, permease component, putative

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Transporter MFS Superfamily; Permease Facilitator Superfamily; Facilitator Superfamily Permease; Permease Of Facilitator Superfamily; Facilitator Family Transporter; MFS Protein Permease Component; Multidrug-Efflux Transporter MFS Family

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MARYVPLADAHRLPLWRRPIALLFLMALAMPIAFNTWSALLNNFVIEAANFDGSDIGLLHTVREIPGFLAVGVIAIIIFM
REQVLGLVSLILLGVATAVTAWFPSMGGILAITMLSSIGFHYYETVNQSLQLQWLSKQEAPRVLGWLLAAGSGATLIAYL
AIMALWDTLGLSYNTVYMVGGGITVVLAVFAMLAYPQFEAPNPQIKKMVLRKRYWLYYALQFMSGARRQIFVVFAGFMMV
EKFGYDVHEITLLYLINLVVNMMVAPLLGRAVGYFGERRTLGFEYIGLVLVFLCYGGVYYFSWGVAVAATLYVLDHIFFG
LALALKTYFQKIADPGDIAPTAAVAFTINHIAAVFLPVSFGLLWLWSPAAVFFLAASMAAVSFVLAMMIPRHPEKGFETI
FARGIPTPAE

Sequences:

>Translated_410_residues
MARYVPLADAHRLPLWRRPIALLFLMALAMPIAFNTWSALLNNFVIEAANFDGSDIGLLHTVREIPGFLAVGVIAIIIFM
REQVLGLVSLILLGVATAVTAWFPSMGGILAITMLSSIGFHYYETVNQSLQLQWLSKQEAPRVLGWLLAAGSGATLIAYL
AIMALWDTLGLSYNTVYMVGGGITVVLAVFAMLAYPQFEAPNPQIKKMVLRKRYWLYYALQFMSGARRQIFVVFAGFMMV
EKFGYDVHEITLLYLINLVVNMMVAPLLGRAVGYFGERRTLGFEYIGLVLVFLCYGGVYYFSWGVAVAATLYVLDHIFFG
LALALKTYFQKIADPGDIAPTAAVAFTINHIAAVFLPVSFGLLWLWSPAAVFFLAASMAAVSFVLAMMIPRHPEKGFETI
FARGIPTPAE
>Mature_409_residues
ARYVPLADAHRLPLWRRPIALLFLMALAMPIAFNTWSALLNNFVIEAANFDGSDIGLLHTVREIPGFLAVGVIAIIIFMR
EQVLGLVSLILLGVATAVTAWFPSMGGILAITMLSSIGFHYYETVNQSLQLQWLSKQEAPRVLGWLLAAGSGATLIAYLA
IMALWDTLGLSYNTVYMVGGGITVVLAVFAMLAYPQFEAPNPQIKKMVLRKRYWLYYALQFMSGARRQIFVVFAGFMMVE
KFGYDVHEITLLYLINLVVNMMVAPLLGRAVGYFGERRTLGFEYIGLVLVFLCYGGVYYFSWGVAVAATLYVLDHIFFGL
ALALKTYFQKIADPGDIAPTAAVAFTINHIAAVFLPVSFGLLWLWSPAAVFFLAASMAAVSFVLAMMIPRHPEKGFETIF
ARGIPTPAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45305; Mature: 45173

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARYVPLADAHRLPLWRRPIALLFLMALAMPIAFNTWSALLNNFVIEAANFDGSDIGLLH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHH
TVREIPGFLAVGVIAIIIFMREQVLGLVSLILLGVATAVTAWFPSMGGILAITMLSSIGF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
HYYETVNQSLQLQWLSKQEAPRVLGWLLAAGSGATLIAYLAIMALWDTLGLSYNTVYMVG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEC
GGITVVLAVFAMLAYPQFEAPNPQIKKMVLRKRYWLYYALQFMSGARRQIFVVFAGFMMV
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EKFGYDVHEITLLYLINLVVNMMVAPLLGRAVGYFGERRTLGFEYIGLVLVFLCYGGVYY
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FSWGVAVAATLYVLDHIFFGLALALKTYFQKIADPGDIAPTAAVAFTINHIAAVFLPVSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GLLWLWSPAAVFFLAASMAAVSFVLAMMIPRHPEKGFETIFARGIPTPAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ARYVPLADAHRLPLWRRPIALLFLMALAMPIAFNTWSALLNNFVIEAANFDGSDIGLLH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHH
TVREIPGFLAVGVIAIIIFMREQVLGLVSLILLGVATAVTAWFPSMGGILAITMLSSIGF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
HYYETVNQSLQLQWLSKQEAPRVLGWLLAAGSGATLIAYLAIMALWDTLGLSYNTVYMVG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEC
GGITVVLAVFAMLAYPQFEAPNPQIKKMVLRKRYWLYYALQFMSGARRQIFVVFAGFMMV
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EKFGYDVHEITLLYLINLVVNMMVAPLLGRAVGYFGERRTLGFEYIGLVLVFLCYGGVYY
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FSWGVAVAATLYVLDHIFFGLALALKTYFQKIADPGDIAPTAAVAFTINHIAAVFLPVSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GLLWLWSPAAVFFLAASMAAVSFVLAMMIPRHPEKGFETIFARGIPTPAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA