| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679353
Identifier: 110679353
GI number: 110679353
Start: 1979281
End: 1979766
Strand: Direct
Name: 110679353
Synonym: RD1_2072
Alternate gene names: NA
Gene position: 1979281-1979766 (Clockwise)
Preceding gene: 110679352
Following gene: 110679354
Centisome position: 47.89
GC content: 57.61
Gene sequence:
>486_bases ATGATCGAATTCACTATTTCTCCCGCCCGGTCGCTGGATGCCGGTGCTGTTGGAAACATTCTGTCGGTGTCAAATGACTT GATGCCGTGGCTGCCGCGCGTGCATTCGGCGGCGGAAGAAATCAAATATGCCGGCGACATGATTGAGGCCGGGTGGGTCA AGGTTGCCAAGATCGACAACAAGGTTGTCGGTTTTATCGCCCGTCACGAGAGCGAGGTTTACGCGCTGTATGTCCTGCCA GAAGCGCAGGACAAGGGCATCGGCACCGCGCTGCTTGAAGATGCGAAGGGCGAATGCGACAAGCTCGGCTTATGGAGCTA TGAGGCCAATGGCGTTGCCGCGATTTTCTATGAGTTGCGCGGTTTCGTAAGCGTGGATCGCACGAACGGCAGTGGGAACG AGGCCGGTTTGCCGGACATCCGCTTTGAATGGACTCGCAATGCGCCCGAATTCAAACCCGCGCGCGGCGCAAGGAAAACG GGCTGA
Upstream 100 bases:
>100_bases TGATGAATTTCGCACCATCGGTGTTGAGTTTGCGCCCCGGCGATGGTCCGCCGCATATCCGACTTGATCAGGCGGCCCAA TTCCTTTTAGGGGATAGGCT
Downstream 100 bases:
>100_bases TGGCCAAAGGTCCTGTGCTGATCGACCTTGAGGCGCAAGAAACCAGATCCGTCGCCGAGGCGCCGCCGGTCCCAGACCTG ACACCGCCCCCGCAGGGGCA
Product: acetyltransferase, putative
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase; Acetyltransferase GNAT Family Protein; GNAT Family Acetyltransferase; Acetyltransferase Gnat Family Protein; Acetyltransferase Protein
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MIEFTISPARSLDAGAVGNILSVSNDLMPWLPRVHSAAEEIKYAGDMIEAGWVKVAKIDNKVVGFIARHESEVYALYVLP EAQDKGIGTALLEDAKGECDKLGLWSYEANGVAAIFYELRGFVSVDRTNGSGNEAGLPDIRFEWTRNAPEFKPARGARKT G
Sequences:
>Translated_161_residues MIEFTISPARSLDAGAVGNILSVSNDLMPWLPRVHSAAEEIKYAGDMIEAGWVKVAKIDNKVVGFIARHESEVYALYVLP EAQDKGIGTALLEDAKGECDKLGLWSYEANGVAAIFYELRGFVSVDRTNGSGNEAGLPDIRFEWTRNAPEFKPARGARKT G >Mature_161_residues MIEFTISPARSLDAGAVGNILSVSNDLMPWLPRVHSAAEEIKYAGDMIEAGWVKVAKIDNKVVGFIARHESEVYALYVLP EAQDKGIGTALLEDAKGECDKLGLWSYEANGVAAIFYELRGFVSVDRTNGSGNEAGLPDIRFEWTRNAPEFKPARGARKT G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17545; Mature: 17545
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEFTISPARSLDAGAVGNILSVSNDLMPWLPRVHSAAEEIKYAGDMIEAGWVKVAKIDN CEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC KVVGFIARHESEVYALYVLPEAQDKGIGTALLEDAKGECDKLGLWSYEANGVAAIFYELR CEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCEEEEEHHH GFVSVDRTNGSGNEAGLPDIRFEWTRNAPEFKPARGARKTG CEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MIEFTISPARSLDAGAVGNILSVSNDLMPWLPRVHSAAEEIKYAGDMIEAGWVKVAKIDN CEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC KVVGFIARHESEVYALYVLPEAQDKGIGTALLEDAKGECDKLGLWSYEANGVAAIFYELR CEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCEEEEEHHH GFVSVDRTNGSGNEAGLPDIRFEWTRNAPEFKPARGARKTG CEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA