Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is 110679353

Identifier: 110679353

GI number: 110679353

Start: 1979281

End: 1979766

Strand: Direct

Name: 110679353

Synonym: RD1_2072

Alternate gene names: NA

Gene position: 1979281-1979766 (Clockwise)

Preceding gene: 110679352

Following gene: 110679354

Centisome position: 47.89

GC content: 57.61

Gene sequence:

>486_bases
ATGATCGAATTCACTATTTCTCCCGCCCGGTCGCTGGATGCCGGTGCTGTTGGAAACATTCTGTCGGTGTCAAATGACTT
GATGCCGTGGCTGCCGCGCGTGCATTCGGCGGCGGAAGAAATCAAATATGCCGGCGACATGATTGAGGCCGGGTGGGTCA
AGGTTGCCAAGATCGACAACAAGGTTGTCGGTTTTATCGCCCGTCACGAGAGCGAGGTTTACGCGCTGTATGTCCTGCCA
GAAGCGCAGGACAAGGGCATCGGCACCGCGCTGCTTGAAGATGCGAAGGGCGAATGCGACAAGCTCGGCTTATGGAGCTA
TGAGGCCAATGGCGTTGCCGCGATTTTCTATGAGTTGCGCGGTTTCGTAAGCGTGGATCGCACGAACGGCAGTGGGAACG
AGGCCGGTTTGCCGGACATCCGCTTTGAATGGACTCGCAATGCGCCCGAATTCAAACCCGCGCGCGGCGCAAGGAAAACG
GGCTGA

Upstream 100 bases:

>100_bases
TGATGAATTTCGCACCATCGGTGTTGAGTTTGCGCCCCGGCGATGGTCCGCCGCATATCCGACTTGATCAGGCGGCCCAA
TTCCTTTTAGGGGATAGGCT

Downstream 100 bases:

>100_bases
TGGCCAAAGGTCCTGTGCTGATCGACCTTGAGGCGCAAGAAACCAGATCCGTCGCCGAGGCGCCGCCGGTCCCAGACCTG
ACACCGCCCCCGCAGGGGCA

Product: acetyltransferase, putative

Products: NA

Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase; Acetyltransferase GNAT Family Protein; GNAT Family Acetyltransferase; Acetyltransferase Gnat Family Protein; Acetyltransferase Protein

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MIEFTISPARSLDAGAVGNILSVSNDLMPWLPRVHSAAEEIKYAGDMIEAGWVKVAKIDNKVVGFIARHESEVYALYVLP
EAQDKGIGTALLEDAKGECDKLGLWSYEANGVAAIFYELRGFVSVDRTNGSGNEAGLPDIRFEWTRNAPEFKPARGARKT
G

Sequences:

>Translated_161_residues
MIEFTISPARSLDAGAVGNILSVSNDLMPWLPRVHSAAEEIKYAGDMIEAGWVKVAKIDNKVVGFIARHESEVYALYVLP
EAQDKGIGTALLEDAKGECDKLGLWSYEANGVAAIFYELRGFVSVDRTNGSGNEAGLPDIRFEWTRNAPEFKPARGARKT
G
>Mature_161_residues
MIEFTISPARSLDAGAVGNILSVSNDLMPWLPRVHSAAEEIKYAGDMIEAGWVKVAKIDNKVVGFIARHESEVYALYVLP
EAQDKGIGTALLEDAKGECDKLGLWSYEANGVAAIFYELRGFVSVDRTNGSGNEAGLPDIRFEWTRNAPEFKPARGARKT
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17545; Mature: 17545

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFTISPARSLDAGAVGNILSVSNDLMPWLPRVHSAAEEIKYAGDMIEAGWVKVAKIDN
CEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
KVVGFIARHESEVYALYVLPEAQDKGIGTALLEDAKGECDKLGLWSYEANGVAAIFYELR
CEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCEEEEEHHH
GFVSVDRTNGSGNEAGLPDIRFEWTRNAPEFKPARGARKTG
CEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIEFTISPARSLDAGAVGNILSVSNDLMPWLPRVHSAAEEIKYAGDMIEAGWVKVAKIDN
CEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
KVVGFIARHESEVYALYVLPEAQDKGIGTALLEDAKGECDKLGLWSYEANGVAAIFYELR
CEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCEEEEEHHH
GFVSVDRTNGSGNEAGLPDIRFEWTRNAPEFKPARGARKTG
CEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA