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The map label for this gene is ycjF [C]

Identifier: 110679354

GI number: 110679354

Start: 1979766

End: 1980761

Strand: Direct

Name: ycjF [C]

Synonym: RD1_2073

Alternate gene names: 110679354

Gene position: 1979766-1980761 (Clockwise)

Preceding gene: 110679353

Following gene: 110679355

Centisome position: 47.9

GC content: 66.57

Gene sequence:

>996_bases
ATGGCCAAAGGTCCTGTGCTGATCGACCTTGAGGCGCAAGAAACCAGATCCGTCGCCGAGGCGCCGCCGGTCCCAGACCT
GACACCGCCCCCGCAGGGGCAGGCGATGCAAAGCGTGGCAGGGCTGGCCGCGCGCCGCCCGTCCCGGCTTGTGCGCTGGT
TTTTTGGCCTTGGCGCGGGGCTGATGGGGGCCATCGTCTCGGTTGCGGCCTGGGATTTTGTCACCGGCCTCGTGATGCGC
AATCCGGTGCTGGGCTGGGCGGTGACGGTGCTGCTTGCTGCTTTTCTTGTCGTGCTGGCGCTGATTGTCCTGCGTGAACT
TGCCGCGCTGAGCCGTCTGGCAAAGGTTGACAGCCTGCGCCGCGATGCCGATGCCGCCTTGCTGGACGCTGATCTGGCAG
CGGCGCGCAAAGTGTCGGATCGTCTGGTCGCGCTGTATAAAACCCGCGAGGAAACCCGCTGGGCACGCGGACGGTTTGCC
GATCTGGCCCCCGATCAACTGGATGCGGCCGGCTTGCTGGGCGTGTGTGAAACCGAACTGCTCGCCCCGCTGGACCGGAT
GGCGGCGCGCGAAGTTGAGGTGGCCGCGCGGCACGTCGCCACGGTAACGGCGCTGGTGCCGCTGGCCCTCGCGGATGTGG
CCGCTGCATTGACCGCCAACATCCGCATGATTCGCCGTATCGCCGAAGTCTATGGCGGGCGCGCCGGGACACTGGGCAGC
TGGCGGCTGACGCGTGCTGTGCTTGCGCATATGGTGGCGACGGGTGCGGTTGCCGTGGGGGACGATATGCTTGAGCCGAT
CCTTGGCGGCTCCATCGTGGGCAAGCTGTCGCGGAGATTTGGCGAGGGGCTCGTCAATGGAGCACTGACCGCACGCGTGG
GTGTCGCGGCGATGGAGGTGTGCCGGCCCATGGCTTTCGCGACGCAAAAACGCCCGAAGGTGCGCGAGATCATCACCAAC
AGCCTGAGCGGCCTTTTCAAACCCGGCAGAACCTGA

Upstream 100 bases:

>100_bases
ACGGCAGTGGGAACGAGGCCGGTTTGCCGGACATCCGCTTTGAATGGACTCGCAATGCGCCCGAATTCAAACCCGCGCGC
GGCGCAAGGAAAACGGGCTG

Downstream 100 bases:

>100_bases
AGGCGCTGGCTGCAGGTCCGTTGGATGGGGTCTTGTGATGGCGCAACGCTGGGCTTATACACGCGCGCATGACAGGATTT
TTCGTGATTACCGTGCGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MAKGPVLIDLEAQETRSVAEAPPVPDLTPPPQGQAMQSVAGLAARRPSRLVRWFFGLGAGLMGAIVSVAAWDFVTGLVMR
NPVLGWAVTVLLAAFLVVLALIVLRELAALSRLAKVDSLRRDADAALLDADLAAARKVSDRLVALYKTREETRWARGRFA
DLAPDQLDAAGLLGVCETELLAPLDRMAAREVEVAARHVATVTALVPLALADVAAALTANIRMIRRIAEVYGGRAGTLGS
WRLTRAVLAHMVATGAVAVGDDMLEPILGGSIVGKLSRRFGEGLVNGALTARVGVAAMEVCRPMAFATQKRPKVREIITN
SLSGLFKPGRT

Sequences:

>Translated_331_residues
MAKGPVLIDLEAQETRSVAEAPPVPDLTPPPQGQAMQSVAGLAARRPSRLVRWFFGLGAGLMGAIVSVAAWDFVTGLVMR
NPVLGWAVTVLLAAFLVVLALIVLRELAALSRLAKVDSLRRDADAALLDADLAAARKVSDRLVALYKTREETRWARGRFA
DLAPDQLDAAGLLGVCETELLAPLDRMAAREVEVAARHVATVTALVPLALADVAAALTANIRMIRRIAEVYGGRAGTLGS
WRLTRAVLAHMVATGAVAVGDDMLEPILGGSIVGKLSRRFGEGLVNGALTARVGVAAMEVCRPMAFATQKRPKVREIITN
SLSGLFKPGRT
>Mature_330_residues
AKGPVLIDLEAQETRSVAEAPPVPDLTPPPQGQAMQSVAGLAARRPSRLVRWFFGLGAGLMGAIVSVAAWDFVTGLVMRN
PVLGWAVTVLLAAFLVVLALIVLRELAALSRLAKVDSLRRDADAALLDADLAAARKVSDRLVALYKTREETRWARGRFAD
LAPDQLDAAGLLGVCETELLAPLDRMAAREVEVAARHVATVTALVPLALADVAAALTANIRMIRRIAEVYGGRAGTLGSW
RLTRAVLAHMVATGAVAVGDDMLEPILGGSIVGKLSRRFGEGLVNGALTARVGVAAMEVCRPMAFATQKRPKVREIITNS
LSGLFKPGRT

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=157, Percent_Identity=31.8471337579618, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 35046; Mature: 34914

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGPVLIDLEAQETRSVAEAPPVPDLTPPPQGQAMQSVAGLAARRPSRLVRWFFGLGAG
CCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
LMGAIVSVAAWDFVTGLVMRNPVLGWAVTVLLAAFLVVLALIVLRELAALSRLAKVDSLR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDADAALLDADLAAARKVSDRLVALYKTREETRWARGRFADLAPDQLDAAGLLGVCETEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LAPLDRMAAREVEVAARHVATVTALVPLALADVAAALTANIRMIRRIAEVYGGRAGTLGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
WRLTRAVLAHMVATGAVAVGDDMLEPILGGSIVGKLSRRFGEGLVNGALTARVGVAAMEV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRPMAFATQKRPKVREIITNSLSGLFKPGRT
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKGPVLIDLEAQETRSVAEAPPVPDLTPPPQGQAMQSVAGLAARRPSRLVRWFFGLGAG
CCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
LMGAIVSVAAWDFVTGLVMRNPVLGWAVTVLLAAFLVVLALIVLRELAALSRLAKVDSLR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDADAALLDADLAAARKVSDRLVALYKTREETRWARGRFADLAPDQLDAAGLLGVCETEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LAPLDRMAAREVEVAARHVATVTALVPLALADVAAALTANIRMIRRIAEVYGGRAGTLGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
WRLTRAVLAHMVATGAVAVGDDMLEPILGGSIVGKLSRRFGEGLVNGALTARVGVAAMEV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRPMAFATQKRPKVREIITNSLSGLFKPGRT
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]