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The map label for this gene is 110679343

Identifier: 110679343

GI number: 110679343

Start: 1969122

End: 1969958

Strand: Reverse

Name: 110679343

Synonym: RD1_2062

Alternate gene names: NA

Gene position: 1969958-1969122 (Counterclockwise)

Preceding gene: 110679344

Following gene: 110679342

Centisome position: 47.66

GC content: 57.95

Gene sequence:

>837_bases
ATGAAGAAACTGGTTTTGACAGGAGCCGCAGGTCGCCTTGGCTCTTACCTGCGCGAGCCGCTCACCGCGCTCTGTGACAC
GTTGGTCAGCACGGATATCGTGGACGATATCGGCACGCTTTATGCGGGCGAAACCTATGTCAAAGCCGATCTTGCGCAGA
TGGACCAGATTGCGCCGGTGCTCGAGGGGGCCGATATGGTGGTGCATTTCGGGGCCATCGTGGATGAAAAACCCTTTGAG
GAATTGCTGGGTCCGAACTTTGTCGGCTCCTACAACATCTGGGAAGCCGGGTATAAGGCCGGTGTGAAACGGATCGTCTA
TGCCTCGTCAATCCACGCGGTAGGCATGCATCTGAAATCCGATTTCATCGGAATCGACGCAGAACACCGCCCCGATACGT
TTTATGGGCTCGCCAAATGCTTTACCGAAGATCTGGGCCGGATGTATTGGGACAAACGCGGGCTGGAATCCGTTCACCTG
CGCATCCTCTCCTGCGCGCAAGTCAACAACACGCGCGCCCTGGGATCATGGCTGAGCTATCCCGACCTGATCCAACTCGT
CACCCGTGCCATCGACACGCCATCGGTGGGGTTCAGCATCATCTACGGCGTGTCCAACAACGACCGCGCGCCCGTGGACA
ATGCCAAAGCGAGCTTTCTGGGCTACCGCCCCATCGACAATGCCGAAGTCTATGCCGCCGAGGTTCTCGCACAGGCAGAG
CCGGTTGATACCACCGACCCGGGGCAGATGTGTCACGGCGGACCTTTTGCCAAGGTCGACCTTGGACAAAGCGGGCTGGC
CCAGATGAATGTCGTGAACGACAAAAAGCAGACCTGA

Upstream 100 bases:

>100_bases
GCCTATCGCAGTCTTGATCTTGCGCCCTTTGGGGTCGAACGTGTCCTGCGGGGCGAGAAATTCTTGGAAAAAGCCGTGAT
CTGACGGCAGGGAGACAAAT

Downstream 100 bases:

>100_bases
CCGATGGCTGTCGTGTGCAGTGACAGATTGACCGAACGGCGCGTGAACTCCGCGCTGTCAAATTACCAGTATGATCTTGC
CGCTGCATTCACTGATATTG

Product: hypothetical protein

Products: NA

Alternate protein names: 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD Dependent Epimerase/Dehydratase Family Protein; TDP-Glucose-4 6-Dehydratase-Related Protein; Sugar Epimerase/Dehydratase-Like Protein; DTDP-Glucose 4 6-Dehydratase; Oxidoreductase Protein; UDP-Glucose 4-Epimerase Protein; UDP Glucose Epimerase; Sugar Epimerase/Dehydratase Homolog; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dehydratase/Epimerase; Epimerase/Dehydratase; UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; Short Chain Dehydrogenase Family Protein; NDP-Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerase Dehydratase Protein; NAD Dependent Epimerase/Dehydratase

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKKLVLTGAAGRLGSYLREPLTALCDTLVSTDIVDDIGTLYAGETYVKADLAQMDQIAPVLEGADMVVHFGAIVDEKPFE
ELLGPNFVGSYNIWEAGYKAGVKRIVYASSIHAVGMHLKSDFIGIDAEHRPDTFYGLAKCFTEDLGRMYWDKRGLESVHL
RILSCAQVNNTRALGSWLSYPDLIQLVTRAIDTPSVGFSIIYGVSNNDRAPVDNAKASFLGYRPIDNAEVYAAEVLAQAE
PVDTTDPGQMCHGGPFAKVDLGQSGLAQMNVVNDKKQT

Sequences:

>Translated_278_residues
MKKLVLTGAAGRLGSYLREPLTALCDTLVSTDIVDDIGTLYAGETYVKADLAQMDQIAPVLEGADMVVHFGAIVDEKPFE
ELLGPNFVGSYNIWEAGYKAGVKRIVYASSIHAVGMHLKSDFIGIDAEHRPDTFYGLAKCFTEDLGRMYWDKRGLESVHL
RILSCAQVNNTRALGSWLSYPDLIQLVTRAIDTPSVGFSIIYGVSNNDRAPVDNAKASFLGYRPIDNAEVYAAEVLAQAE
PVDTTDPGQMCHGGPFAKVDLGQSGLAQMNVVNDKKQT
>Mature_278_residues
MKKLVLTGAAGRLGSYLREPLTALCDTLVSTDIVDDIGTLYAGETYVKADLAQMDQIAPVLEGADMVVHFGAIVDEKPFE
ELLGPNFVGSYNIWEAGYKAGVKRIVYASSIHAVGMHLKSDFIGIDAEHRPDTFYGLAKCFTEDLGRMYWDKRGLESVHL
RILSCAQVNNTRALGSWLSYPDLIQLVTRAIDTPSVGFSIIYGVSNNDRAPVDNAKASFLGYRPIDNAEVYAAEVLAQAE
PVDTTDPGQMCHGGPFAKVDLGQSGLAQMNVVNDKKQT

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30225; Mature: 30225

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLVLTGAAGRLGSYLREPLTALCDTLVSTDIVDDIGTLYAGETYVKADLAQMDQIAPV
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LEGADMVVHFGAIVDEKPFEELLGPNFVGSYNIWEAGYKAGVKRIVYASSIHAVGMHLKS
HCCCHHEEEHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DFIGIDAEHRPDTFYGLAKCFTEDLGRMYWDKRGLESVHLRILSCAQVNNTRALGSWLSY
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCC
PDLIQLVTRAIDTPSVGFSIIYGVSNNDRAPVDNAKASFLGYRPIDNAEVYAAEVLAQAE
HHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHEECCCCCCCHHHHHHHHHHHCC
PVDTTDPGQMCHGGPFAKVDLGQSGLAQMNVVNDKKQT
CCCCCCCCCCCCCCCCEEEECCCCCCHHEEECCCCCCC
>Mature Secondary Structure
MKKLVLTGAAGRLGSYLREPLTALCDTLVSTDIVDDIGTLYAGETYVKADLAQMDQIAPV
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LEGADMVVHFGAIVDEKPFEELLGPNFVGSYNIWEAGYKAGVKRIVYASSIHAVGMHLKS
HCCCHHEEEHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DFIGIDAEHRPDTFYGLAKCFTEDLGRMYWDKRGLESVHLRILSCAQVNNTRALGSWLSY
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCC
PDLIQLVTRAIDTPSVGFSIIYGVSNNDRAPVDNAKASFLGYRPIDNAEVYAAEVLAQAE
HHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHEECCCCCCCHHHHHHHHHHHCC
PVDTTDPGQMCHGGPFAKVDLGQSGLAQMNVVNDKKQT
CCCCCCCCCCCCCCCCEEEECCCCCCHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA