Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679342

Identifier: 110679342

GI number: 110679342

Start: 1968226

End: 1969008

Strand: Reverse

Name: 110679342

Synonym: RD1_2061

Alternate gene names: NA

Gene position: 1969008-1968226 (Counterclockwise)

Preceding gene: 110679343

Following gene: 110679340

Centisome position: 47.64

GC content: 57.98

Gene sequence:

>783_bases
ATGCCGTTGGAAATAATTCCGGGAAATGGCCCTTTGATCGTTGCGATGCCCTATACCGGCACGAATATCCGGCGCGAACT
GGTGGAGCGCCTGCATGATCAAAGCCGCTATTTTACCTCCAATGACCGATATCTTGACCGGCTGCTCAGCGGTCTGGCAC
AGGATGCAACGACCATTCGCACCAACTTTCATCGCTATGTCTCGGATGTGGATGCGGTCTCAAAAGGCTCGGAATTGCGT
GCGCGCGATGGCATGCTCGGCGTGATCCCCCTGATTGATCGCGATGGCACCGGTATCTGGGACACGCCGCCCAGCGTGAG
TGACGCAAGGGTTTGGCGGGCGTTGTATTTCGCGCCCTATCATGCAGCGCTGGCCACACAGATTGCCCGCGTACGCGCCA
AATATGGCCATGCGATTGTGCTGAACTGTCGGGCAAGGCGCGACACGAACGCCGCTGGCTCAGATGTACCGGACATCGAA
TTCTCCACGCATTTGGGGGCATCCTGCGCTGTCAGCCTGTCGATGAAACTGGCCACGCTGGTTAAAAGTAGCAGCGCCCA
TAGTGTGACGTTCAACGGTCAGTTGCGAACCGGGTTGACCACGCGCCAATATGGCAGGCCAAAGGCAAACACGCATGCCT
TTGATATGGACGTGCACGAAAGATGCTACCTGACGGAAGAGCGTGAGGGCGAAGGCGGGCATTACGACGCTGAAAAAGCC
GGACCCCTGCGGGAAACGCTGCGCGAGGTGATGGACCATCTGAGCCGTTGGACGCCGTACTGA

Upstream 100 bases:

>100_bases
TGTGCAGTGACAGATTGACCGAACGGCGCGTGAACTCCGCGCTGTCAAATTACCAGTATGATCTTGCCGCTGCATTCACT
GATATTGGGGGGGTATCCGC

Downstream 100 bases:

>100_bases
CAGTGCCACGTCGCTTTTGGCAATAGCGCCTGCCGCCTGTACAGGCCCGGCGTCTACTGCGCCTGACGAATTAACCGAAA
CATCAAGAACCACGTAACGC

Product: n-formylglutamate amidohydrolase, putative

Products: L-glutamate; formamide

Alternate protein names: N-Formylglutamate Deformylase; Formylglutamate Amidohydrolase; Formiminoglutamase; Formiminoglutamase Protein; N-Formylglutamate Amidohydrolase HutG; Histidine Degradation; HutG Protein; N-Formylglutamate Deformylase Family Protein; N-Formylglutamate Amidohydrolase Superfamily; Formylglutamte Amindohyrolase; Hydrolase; N-Formylglutamate_deformylase Protein; N-Formylglutamate Amidohydrolase Family Protein

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MPLEIIPGNGPLIVAMPYTGTNIRRELVERLHDQSRYFTSNDRYLDRLLSGLAQDATTIRTNFHRYVSDVDAVSKGSELR
ARDGMLGVIPLIDRDGTGIWDTPPSVSDARVWRALYFAPYHAALATQIARVRAKYGHAIVLNCRARRDTNAAGSDVPDIE
FSTHLGASCAVSLSMKLATLVKSSSAHSVTFNGQLRTGLTTRQYGRPKANTHAFDMDVHERCYLTEEREGEGGHYDAEKA
GPLRETLREVMDHLSRWTPY

Sequences:

>Translated_260_residues
MPLEIIPGNGPLIVAMPYTGTNIRRELVERLHDQSRYFTSNDRYLDRLLSGLAQDATTIRTNFHRYVSDVDAVSKGSELR
ARDGMLGVIPLIDRDGTGIWDTPPSVSDARVWRALYFAPYHAALATQIARVRAKYGHAIVLNCRARRDTNAAGSDVPDIE
FSTHLGASCAVSLSMKLATLVKSSSAHSVTFNGQLRTGLTTRQYGRPKANTHAFDMDVHERCYLTEEREGEGGHYDAEKA
GPLRETLREVMDHLSRWTPY
>Mature_259_residues
PLEIIPGNGPLIVAMPYTGTNIRRELVERLHDQSRYFTSNDRYLDRLLSGLAQDATTIRTNFHRYVSDVDAVSKGSELRA
RDGMLGVIPLIDRDGTGIWDTPPSVSDARVWRALYFAPYHAALATQIARVRAKYGHAIVLNCRARRDTNAAGSDVPDIEF
STHLGASCAVSLSMKLATLVKSSSAHSVTFNGQLRTGLTTRQYGRPKANTHAFDMDVHERCYLTEEREGEGGHYDAEKAG
PLRETLREVMDHLSRWTPY

Specific function: Unknown

COG id: COG3741

COG function: function code E; N-formylglutamate amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.3.8

Molecular weight: Translated: 29019; Mature: 28888

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLEIIPGNGPLIVAMPYTGTNIRRELVERLHDQSRYFTSNDRYLDRLLSGLAQDATTIR
CCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCEECCCHHHHHHHHHHHHHHHHHHH
TNFHRYVSDVDAVSKGSELRARDGMLGVIPLIDRDGTGIWDTPPSVSDARVWRALYFAPY
HHHHHHHHHHHHHCCCCCHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
HAALATQIARVRAKYGHAIVLNCRARRDTNAAGSDVPDIEFSTHLGASCAVSLSMKLATL
HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEHHCCCCHHHHHHHHHHHHH
VKSSSAHSVTFNGQLRTGLTTRQYGRPKANTHAFDMDVHERCYLTEEREGEGGHYDAEKA
HHCCCCCEEEECCEEECCCCHHHCCCCCCCCEEEECCHHHHEEECCCCCCCCCCCCCCCC
GPLRETLREVMDHLSRWTPY
CCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLEIIPGNGPLIVAMPYTGTNIRRELVERLHDQSRYFTSNDRYLDRLLSGLAQDATTIR
CCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCEECCCHHHHHHHHHHHHHHHHHHH
TNFHRYVSDVDAVSKGSELRARDGMLGVIPLIDRDGTGIWDTPPSVSDARVWRALYFAPY
HHHHHHHHHHHHHCCCCCHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
HAALATQIARVRAKYGHAIVLNCRARRDTNAAGSDVPDIEFSTHLGASCAVSLSMKLATL
HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEHHCCCCHHHHHHHHHHHHH
VKSSSAHSVTFNGQLRTGLTTRQYGRPKANTHAFDMDVHERCYLTEEREGEGGHYDAEKA
HHCCCCCEEEECCEEECCCCHHHCCCCCCCCEEEECCHHHHEEECCCCCCCCCCCCCCCC
GPLRETLREVMDHLSRWTPY
CCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N-formimidoyl-L-glutamate; H2O

Specific reaction: N-formimidoyl-L-glutamate + H2O = L-glutamate + formamide

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA