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The map label for this gene is exoI [H]

Identifier: 110679307

GI number: 110679307

Start: 1933105

End: 1933776

Strand: Direct

Name: exoI [H]

Synonym: RD1_2025

Alternate gene names: 110679307

Gene position: 1933105-1933776 (Clockwise)

Preceding gene: 110679306

Following gene: 110679310

Centisome position: 46.77

GC content: 62.8

Gene sequence:

>672_bases
ATGCACATGGTGAGGTGGGTCTTGAGCATGTTGACTGCAATGGCAGTCTGCACGGGTGCGTCGTCTGCGGTGGCGGGTAC
TGTGGGCGTGATCCGCGTGATTGACGGTGATACGCTGGATGTGGGCGGCACGCGTGTGCGTCTGCACGGGATCGACGCCC
CCGAAGCGGATCAGACCTGCACCACGACGGGCGGTGAGATCTGGCGCTGCGGCGCTTGGGTCAGTCAAACCGTAACGGCG
CGCTTTGGCGGAAAAACAGCGCGGTGCGTTTCGATAGATACCGACCGCTATGGCCGGATGGTGGCAAGATGCAACGTCGA
TGGACAGGACATCGCGGCAAATCTTGTGACAGAGGGTCTGGCATTCTCCTACAGGCGATACTCTGACGCATATACCGGCA
TGGAACGCGCCGCCGCATCACGTGGCGCAGGGCTTCATTCGAGCCGTTTCCAATCCCCGGCGGAGTTTCGCAAATCACGC
TCGAACGCCGATGCGCCGCCGGACGGGGCGTGCCGGATCAAGGGCAACATCTCAAGCGATGGCACGCGCATCTATCATGT
GCCGGGCCAGCATCATTATGACCGCACCCGTATTCGTACCAAACAGGGCGAGCGGTGGTTCTGTTCTGTGGCCGAGGCGC
GCGCGGCGGGCTGGCGTGCCGCCCGCCGGTAA

Upstream 100 bases:

>100_bases
GGGCGTGGATACATCCGGACTGGCAAACTGCACAGCGGTAAGCTTTGGTTAGTCTAGATTGAGGCCAGCGCTTGTTTTGG
CGGCGTGAGATGCACATCTC

Downstream 100 bases:

>100_bases
GCCTATCCGATGCTGTAAGGCAGAACATCCCGCAGGTTCGGATCGACCTTGAGCTGGCGTTCCAGCGGTGGCACGGCGCG
TTGATGACAGGTGCTGCGCT

Product: succinoglycan biosynthesis protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MHMVRWVLSMLTAMAVCTGASSAVAGTVGVIRVIDGDTLDVGGTRVRLHGIDAPEADQTCTTTGGEIWRCGAWVSQTVTA
RFGGKTARCVSIDTDRYGRMVARCNVDGQDIAANLVTEGLAFSYRRYSDAYTGMERAAASRGAGLHSSRFQSPAEFRKSR
SNADAPPDGACRIKGNISSDGTRIYHVPGQHHYDRTRIRTKQGERWFCSVAEARAAGWRAARR

Sequences:

>Translated_223_residues
MHMVRWVLSMLTAMAVCTGASSAVAGTVGVIRVIDGDTLDVGGTRVRLHGIDAPEADQTCTTTGGEIWRCGAWVSQTVTA
RFGGKTARCVSIDTDRYGRMVARCNVDGQDIAANLVTEGLAFSYRRYSDAYTGMERAAASRGAGLHSSRFQSPAEFRKSR
SNADAPPDGACRIKGNISSDGTRIYHVPGQHHYDRTRIRTKQGERWFCSVAEARAAGWRAARR
>Mature_223_residues
MHMVRWVLSMLTAMAVCTGASSAVAGTVGVIRVIDGDTLDVGGTRVRLHGIDAPEADQTCTTTGGEIWRCGAWVSQTVTA
RFGGKTARCVSIDTDRYGRMVARCNVDGQDIAANLVTEGLAFSYRRYSDAYTGMERAAASRGAGLHSSRFQSPAEFRKSR
SNADAPPDGACRIKGNISSDGTRIYHVPGQHHYDRTRIRTKQGERWFCSVAEARAAGWRAARR

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 24204; Mature: 24204

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMVRWVLSMLTAMAVCTGASSAVAGTVGVIRVIDGDTLDVGGTRVRLHGIDAPEADQTC
CHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEEECCCEEECCCCEEEEEECCCCCCCCCE
TTTGGEIWRCGAWVSQTVTARFGGKTARCVSIDTDRYGRMVARCNVDGQDIAANLVTEGL
ECCCCCEEECCHHHHHHHHHHCCCCEEEEEEECCHHHCCEEEEECCCHHHHHHHHHHHHH
AFSYRRYSDAYTGMERAAASRGAGLHSSRFQSPAEFRKSRSNADAPPDGACRIKGNISSD
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCCC
GTRIYHVPGQHHYDRTRIRTKQGERWFCSVAEARAAGWRAARR
CCEEEECCCCCCCCHHHHCCCCCCEEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHMVRWVLSMLTAMAVCTGASSAVAGTVGVIRVIDGDTLDVGGTRVRLHGIDAPEADQTC
CHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEEECCCEEECCCCEEEEEECCCCCCCCCE
TTTGGEIWRCGAWVSQTVTARFGGKTARCVSIDTDRYGRMVARCNVDGQDIAANLVTEGL
ECCCCCEEECCHHHHHHHHHHCCCCEEEEEEECCHHHCCEEEEECCCHHHHHHHHHHHHH
AFSYRRYSDAYTGMERAAASRGAGLHSSRFQSPAEFRKSRSNADAPPDGACRIKGNISSD
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCCC
GTRIYHVPGQHHYDRTRIRTKQGERWFCSVAEARAAGWRAARR
CCEEEECCCCCCCCHHHHCCCCCCEEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8118055; 11481431 [H]