Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is 110679299

Identifier: 110679299

GI number: 110679299

Start: 1925120

End: 1925218

Strand: Reverse

Name: 110679299

Synonym: RD1_2017

Alternate gene names: NA

Gene position: 1925218-1925120 (Counterclockwise)

Preceding gene: 110679301

Following gene: 110679298

Centisome position: 46.58

GC content: 65.66

Gene sequence:

>99_bases
TTGGCGCGCGGCACAAGGGGCAAGGCAAGCTGTGTCAAAGCCGGCGCGCCAGTTTTCGCCGCACTTTCCCCCTTTCCCCG
CAGCACCGCCTATGCGTAG

Upstream 100 bases:

>100_bases
TAAAACAGGAGCGCTGGAAGGGGCAAGGCCGCACGGATGCGTAATTTGATGCCGCGCCGCACATGAACGGAGCCAGCGCC
ACCCTGCCCGTCTTTTCCTC

Downstream 100 bases:

>100_bases
ATCGGCGGATCATGACAAACGAACAGATCATTCTCTTTTCCCTTTTTGCCGCCGTGTTTGCGATGCTGCTATGGGGGCGG
TTGCGCTATGATATCGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 32; Mature: 31

Protein sequence:

>32_residues
MARGTRGKASCVKAGAPVFAALSPFPRSTAYA

Sequences:

>Translated_32_residues
MARGTRGKASCVKAGAPVFAALSPFPRSTAYA
>Mature_31_residues
ARGTRGKASCVKAGAPVFAALSPFPRSTAYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3241; Mature: 3110

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGTRGKASCVKAGAPVFAALSPFPRSTAYA
CCCCCCCCCCEECCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure 
ARGTRGKASCVKAGAPVFAALSPFPRSTAYA
CCCCCCCCCEECCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA