| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is hisN [H]
Identifier: 110679289
GI number: 110679289
Start: 1913306
End: 1914130
Strand: Direct
Name: hisN [H]
Synonym: RD1_2006
Alternate gene names: 110679289
Gene position: 1913306-1914130 (Clockwise)
Preceding gene: 110679288
Following gene: 110679290
Centisome position: 46.29
GC content: 61.7
Gene sequence:
>825_bases ATGGCATTTGCTCCGGCTATGACCTTGCCGGAAACTGACCTCACTGAAATTGACGCGGTTGCGAACCGTCTGGCCGACGC CGCGCGCGCGGCCATCCTGCCGTTTTTCCGATCACCTTCCCTGACGCAGGACAATAAGCTGGCTGCGGGGTATGACCCTG TGACAGAAGCGGATCGCGCGGCAGAGCAGGAAATGCGCAGCCTCTTGGCCCGGATGCGCCCGGACGACGCCATTCTGGGA GAAGAACTGGGCGACAAACCCGGCACCAGCGGGCTCACATGGGTGCTGGACCCGATTGACGGGACGCGCGGATTTGTCAG CGGCACGCCCACATGGGGCGTTCTGATTGCGGTGCGCGATGCAAAAGGGCCGTTTTACGGGCTGATTGATCAACCCTACA TCGGTGAAAGGTTCATTGGCGCCCCCGCGCATGCGCATATGACAGGCCCCATGGGCCACAGGGACTTATCAACAGCGCCA CCGCGTGCCTTGGCGCAAGCCACCGTCTTTACCACCTTCCCCGAAGTTGGCAGCCCGGCAGAGCAAGAGGCTTTTCACAA CGTGGCACGTCAGGCAAAACTCACGCGGTACGGCATGGATTGCTATGCCTATGCCTTGCTTGCAAGCGGCCAGATTGACC TCGTGATCGAAGCGGGCTTGCAACCCTATGACATTCAGGCGCCGATCGCGGTGGTGCAGGCAGCGGGCGGAATTGTCACC GATTGGATGGGTGAACCGGCCCATGACGGGGGGCGAGCAATCGCCGCTGCCAATGCGGACATCCACAAGGAGGCGCTTGC CATCCTGAAACGTGCCGGTCCGTGA
Upstream 100 bases:
>100_bases TTGTTTGAACTGGCGCGTGTGTTGAGCGATGTAGCGTAAAACGGCTGAACATGTTTGCGAAGAAACCACCTGCGCCGCCC CTTGCGAGGGGCGGTGTTAG
Downstream 100 bases:
>100_bases CGATCCGGGCGATCAGGAATGCGGATGTGATCGTCACGATGGACGATGCGCGCCGAAAACTGGCAAGGGCGGATATCGTC ATCAAGGGCGGTGCAATCGA
Product: inositol monophosphatase family protein
Products: NA
Alternate protein names: HolPase; Histidinol-phosphate phosphatase [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MAFAPAMTLPETDLTEIDAVANRLADAARAAILPFFRSPSLTQDNKLAAGYDPVTEADRAAEQEMRSLLARMRPDDAILG EELGDKPGTSGLTWVLDPIDGTRGFVSGTPTWGVLIAVRDAKGPFYGLIDQPYIGERFIGAPAHAHMTGPMGHRDLSTAP PRALAQATVFTTFPEVGSPAEQEAFHNVARQAKLTRYGMDCYAYALLASGQIDLVIEAGLQPYDIQAPIAVVQAAGGIVT DWMGEPAHDGGRAIAAANADIHKEALAILKRAGP
Sequences:
>Translated_274_residues MAFAPAMTLPETDLTEIDAVANRLADAARAAILPFFRSPSLTQDNKLAAGYDPVTEADRAAEQEMRSLLARMRPDDAILG EELGDKPGTSGLTWVLDPIDGTRGFVSGTPTWGVLIAVRDAKGPFYGLIDQPYIGERFIGAPAHAHMTGPMGHRDLSTAP PRALAQATVFTTFPEVGSPAEQEAFHNVARQAKLTRYGMDCYAYALLASGQIDLVIEAGLQPYDIQAPIAVVQAAGGIVT DWMGEPAHDGGRAIAAANADIHKEALAILKRAGP >Mature_273_residues AFAPAMTLPETDLTEIDAVANRLADAARAAILPFFRSPSLTQDNKLAAGYDPVTEADRAAEQEMRSLLARMRPDDAILGE ELGDKPGTSGLTWVLDPIDGTRGFVSGTPTWGVLIAVRDAKGPFYGLIDQPYIGERFIGAPAHAHMTGPMGHRDLSTAPP RALAQATVFTTFPEVGSPAEQEAFHNVARQAKLTRYGMDCYAYALLASGQIDLVIEAGLQPYDIQAPIAVVQAAGGIVTD WMGEPAHDGGRAIAAANADIHKEALAILKRAGP
Specific function: Catalyzes the dephosphorylation of histidinol-phosphate to histidinol, the direct precursor of histidine (Probable) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=226, Percent_Identity=29.2035398230088, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1788882, Length=259, Percent_Identity=29.3436293436293, Blast_Score=82, Evalue=4e-17, Organism=Caenorhabditis elegans, GI193202572, Length=284, Percent_Identity=25.7042253521127, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI21357329, Length=231, Percent_Identity=29.004329004329, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24664922, Length=243, Percent_Identity=27.1604938271605, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21357303, Length=225, Percent_Identity=28, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011809 - InterPro: IPR020583 - InterPro: IPR000760 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.15 [H]
Molecular weight: Translated: 29058; Mature: 28927
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00629 IMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFAPAMTLPETDLTEIDAVANRLADAARAAILPFFRSPSLTQDNKLAAGYDPVTEADRA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH AEQEMRSLLARMRPDDAILGEELGDKPGTSGLTWVLDPIDGTRGFVSGTPTWGVLIAVRD HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEC AKGPFYGLIDQPYIGERFIGAPAHAHMTGPMGHRDLSTAPPRALAQATVFTTFPEVGSPA CCCCEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCH EQEAFHNVARQAKLTRYGMDCYAYALLASGQIDLVIEAGLQPYDIQAPIAVVQAAGGIVT HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCHH DWMGEPAHDGGRAIAAANADIHKEALAILKRAGP HCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCC >Mature Secondary Structure AFAPAMTLPETDLTEIDAVANRLADAARAAILPFFRSPSLTQDNKLAAGYDPVTEADRA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH AEQEMRSLLARMRPDDAILGEELGDKPGTSGLTWVLDPIDGTRGFVSGTPTWGVLIAVRD HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEC AKGPFYGLIDQPYIGERFIGAPAHAHMTGPMGHRDLSTAPPRALAQATVFTTFPEVGSPA CCCCEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCH EQEAFHNVARQAKLTRYGMDCYAYALLASGQIDLVIEAGLQPYDIQAPIAVVQAAGGIVT HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCHH DWMGEPAHDGGRAIAAANADIHKEALAILKRAGP HCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]