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The map label for this gene is phrR

Identifier: 110679288

GI number: 110679288

Start: 1912867

End: 1913244

Strand: Direct

Name: phrR

Synonym: RD1_2005

Alternate gene names: NA

Gene position: 1912867-1913244 (Clockwise)

Preceding gene: 110679287

Following gene: 110679289

Centisome position: 46.28

GC content: 56.08

Gene sequence:

>378_bases
ATGGCACACCTTGTAGACGTACATGTTGGAAAACGCATTCGGCAGCGCCGGTGGCTTGTTGGTATGACCCAACAAAAGCT
GGCGGAATGTGTTGGCATCAAGTTTCAGCAGATCCAGAAATATGAGACCGGCGCCAACCGGGTCAGCGCGTCTCGTCTCT
GGGACATTGCCGATGCGCTGGATGTGGACGTGGCATTCTTCTTTGAAGGGCTGCGAGAGGAAGCGGGCAAGGATGCGCCA
GAGCCAACCTCATCGGTTCCCGCTGATATGATGGGCGACAAGGAGGCGATGGACCTTGTGCGCTCCTATTACGCGATCCC
TGAAAACCAGCGCCGTCGGTTGTTTGAACTGGCGCGTGTGTTGAGCGATGTAGCGTAA

Upstream 100 bases:

>100_bases
GACGGTATTAGAAGGTTAAGGTTGCTGCACCAGTGACACAACTATGTCGGTACTGTGGCGGCGACGCGTTTGTAATATGG
GTAAGAGTGAGGAAGATAAT

Downstream 100 bases:

>100_bases
AACGGCTGAACATGTTTGCGAAGAAACCACCTGCGCCGCCCCTTGCGAGGGGCGGTGTTAGATGGCATTTGCTCCGGCTA
TGACCTTGCCGGAAACTGAC

Product: Cro/CI family transcriptional regulator putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MAHLVDVHVGKRIRQRRWLVGMTQQKLAECVGIKFQQIQKYETGANRVSASRLWDIADALDVDVAFFFEGLREEAGKDAP
EPTSSVPADMMGDKEAMDLVRSYYAIPENQRRRLFELARVLSDVA

Sequences:

>Translated_125_residues
MAHLVDVHVGKRIRQRRWLVGMTQQKLAECVGIKFQQIQKYETGANRVSASRLWDIADALDVDVAFFFEGLREEAGKDAP
EPTSSVPADMMGDKEAMDLVRSYYAIPENQRRRLFELARVLSDVA
>Mature_124_residues
AHLVDVHVGKRIRQRRWLVGMTQQKLAECVGIKFQQIQKYETGANRVSASRLWDIADALDVDVAFFFEGLREEAGKDAPE
PTSSVPADMMGDKEAMDLVRSYYAIPENQRRRLFELARVLSDVA

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 14226; Mature: 14095

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHLVDVHVGKRIRQRRWLVGMTQQKLAECVGIKFQQIQKYETGANRVSASRLWDIADAL
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
DVDVAFFFEGLREEAGKDAPEPTSSVPADMMGDKEAMDLVRSYYAIPENQRRRLFELARV
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
LSDVA
HHHCC
>Mature Secondary Structure 
AHLVDVHVGKRIRQRRWLVGMTQQKLAECVGIKFQQIQKYETGANRVSASRLWDIADAL
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
DVDVAFFFEGLREEAGKDAPEPTSSVPADMMGDKEAMDLVRSYYAIPENQRRRLFELARV
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
LSDVA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]