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The map label for this gene is ybhL [H]

Identifier: 110679285

GI number: 110679285

Start: 1910260

End: 1910997

Strand: Reverse

Name: ybhL [H]

Synonym: RD1_2002

Alternate gene names: 110679285

Gene position: 1910997-1910260 (Counterclockwise)

Preceding gene: 110679286

Following gene: 110679284

Centisome position: 46.24

GC content: 56.1

Gene sequence:

>738_bases
ATGGCTGACGTGAATACAATCCGGACCGCTGCCGGATCCCGCGCCGCCCAGATAGATGAGGGTTTGCGCGCCCACATGAA
TAAAGTCTACGCGACGATGTCCGTAGGCATGTTGATCACTTTCGCTGTGGCATGGGCCGTCGGGACCGCGCCGCAACTGA
TGGCGGTGTTCCGTGATCCGGTCACGCTGTCCCCGAACATCCTTGGCTGGATCATCATGTTTGCTCCGCTGGGCATGGTC
TTTGCATTCAGCGCGATGATCAACAAACTCTCCGCAGCCGCGGCGCAGTTGTTCTTCTATTCCTTCGCCGGCGTCATGGG
CCTGTCGATCTCTTGGATTTTCGTGGCTTTCACCGGCATGTCGATCGCTCAGATCTTCCTGATCACATCGATCGCCTTCG
CGGGTCTGTCGCTTTGGGGGTATACCACAAAGAAAGACATCTCCGGCTGGGGTAGCTTCCTGATCATGGGCGTTATCGGT
CTGGTGGTTGCATCCATCGTGAACATCTTCCTCGGCTCGCCTGCGATTATGTTCGCAATCTCGGCCTTGGGCGTTCTGAT
CTTTGCGGGCCTAACAGCCTATGACACGCAGAACATCAAGAACACCTACCTCGCGCACGCCCATCACGGCGACAGCGAGT
GGTTGCAGAAGTCGGGCATCATGGGCGCGCTGAGCCTGTACCTGAACTTCATCAACATGTTCATGATGTTGTTGTCCCTG
TTCGGAAACAGAGAATAA

Upstream 100 bases:

>100_bases
CCGAAAAGCCTTGAAATGGCCGCGAGAGACCACGATATTCAATCGCGAGAGCGCGCAGAAAACCTGACGCGCCGTTACGT
CAATTTGGAGGTCTTTTAGA

Downstream 100 bases:

>100_bases
GTCGCACGCTTGAAGCGACGAAAGACCAAAGCCTGCCAGTCGCCTGACTTGGCAGGCTTTTTATTTTGCCGACTCGTTTT
CTTCAGATCGTGTGCGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MADVNTIRTAAGSRAAQIDEGLRAHMNKVYATMSVGMLITFAVAWAVGTAPQLMAVFRDPVTLSPNILGWIIMFAPLGMV
FAFSAMINKLSAAAAQLFFYSFAGVMGLSISWIFVAFTGMSIAQIFLITSIAFAGLSLWGYTTKKDISGWGSFLIMGVIG
LVVASIVNIFLGSPAIMFAISALGVLIFAGLTAYDTQNIKNTYLAHAHHGDSEWLQKSGIMGALSLYLNFINMFMMLLSL
FGNRE

Sequences:

>Translated_245_residues
MADVNTIRTAAGSRAAQIDEGLRAHMNKVYATMSVGMLITFAVAWAVGTAPQLMAVFRDPVTLSPNILGWIIMFAPLGMV
FAFSAMINKLSAAAAQLFFYSFAGVMGLSISWIFVAFTGMSIAQIFLITSIAFAGLSLWGYTTKKDISGWGSFLIMGVIG
LVVASIVNIFLGSPAIMFAISALGVLIFAGLTAYDTQNIKNTYLAHAHHGDSEWLQKSGIMGALSLYLNFINMFMMLLSL
FGNRE
>Mature_244_residues
ADVNTIRTAAGSRAAQIDEGLRAHMNKVYATMSVGMLITFAVAWAVGTAPQLMAVFRDPVTLSPNILGWIIMFAPLGMVF
AFSAMINKLSAAAAQLFFYSFAGVMGLSISWIFVAFTGMSIAQIFLITSIAFAGLSLWGYTTKKDISGWGSFLIMGVIGL
VVASIVNIFLGSPAIMFAISALGVLIFAGLTAYDTQNIKNTYLAHAHHGDSEWLQKSGIMGALSLYLNFINMFMMLLSLF
GNRE

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=230, Percent_Identity=45.6521739130435, Blast_Score=184, Evalue=4e-48,
Organism=Escherichia coli, GI1787205, Length=114, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 26384; Mature: 26252

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCC
>Mature Secondary Structure 
ADVNTIRTAAGSRAAQIDEGLRAHMNKVYATMSVGMLITFAVAWAVGTAPQLMAVFRDP
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
VTLSPNILGWIIMFAPLGMVFAFSAMINKLSAAAAQLFFYSFAGVMGLSISWIFVAFTGM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIAQIFLITSIAFAGLSLWGYTTKKDISGWGSFLIMGVIGLVVASIVNIFLGSPAIMFAI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SALGVLIFAGLTAYDTQNIKNTYLAHAHHGDSEWLQKSGIMGALSLYLNFINMFMMLLSL
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
FGNRE
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]