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The map label for this gene is glyQ [H]

Identifier: 110679232

GI number: 110679232

Start: 1855659

End: 1856600

Strand: Direct

Name: glyQ [H]

Synonym: RD1_1945

Alternate gene names: 110679232

Gene position: 1855659-1856600 (Clockwise)

Preceding gene: 110679230

Following gene: 110679233

Centisome position: 44.9

GC content: 61.25

Gene sequence:

>942_bases
ATGTCAGACAGCGTCACGTCGCCAAAATCCTTTCAGGAAATCATCCTGCGGCTACAGGACTACTGGGCCGGGAAAGGCTG
CGCGATCCTACAACCCTACGACATGGAAGTGGGGGCAGGTACCTTTCACCCGGCCACCACCCTGCGCAGTCTGGGCAACA
GGCCGTGGGCCGCAGCCTACGTGCAACCCTCACGCCGTCCGACCGATGGACGCTATGGCGACAGCCCCAACCGTTGGCAG
CATTACTACCAGTTTCAGGTGATCATCAAACCCAGCCCGCCGGATTTGCAGGACCTCTATCTGGGGTCCTTGCGCGCCAT
CGGCATCGACATGGACCTGCACGACATCCGCTTTGTAGAGGACGACTGGGAAAGCCCCACGCTCGGGGCCTGGGGTCTCG
GGTGGGAAGTCTGGTGCGACGGGATGGAGGTCAGCCAGTTCACCTATTTCCAGCAGGTGGGCGGTCATGACTGCCACCCC
GTGTCGGGCGAATTGACCTATGGGCTGGAGCGGTTGGCGATGTACATTCTGGGAGCCGATGATGGCAACAAGATGCCATT
CAATGACCCTGATTGTCCGATCCCGCTGACCTACGGCGATGTCTTTCAGGAGGCCGAGGCGCAATACGCCCGCTGGAACT
TCGACGTGGCCGATACCGATGTACTGCTGCAGCACTTCATTGATGCCGAAGCCGAATGCGCGCGCATCCTTGCGCAAGCG
CCGGATGATCCCAAAACCGGGCGGCGCATCGTCATGGCCCAGCCCGCCTATGATCAATGCATCAAGGCCAGCCACATCTT
TAACCTGCTGGATGCGCGCGGCGTGATCTCGGTGACCGAACGGCAGGCCTATATCGGGCGTGTGCGTGACCTTGCCAAGC
AATGCGCCGATGCCTTCGTGCAGACACAGGCGGGCGGCTGGACAGCGGAGAGCGCCGCATGA

Upstream 100 bases:

>100_bases
TTTGACCATAAGTCGGCCGGTAATTTATCGTCTGAGATACAATTGACCCTTGTTCCCAGCCCACGTAGGAAGAGCGCGAG
TTCAGCTTGAGGTTCGCGCC

Downstream 100 bases:

>100_bases
GCGGTAAAATCGTCGGTATCGTCATCCTGATCTCGGCTCTGATTGCCGGGGGTGCGCTCTATTATCTGCAGGTCTACGGG
TTCTACGAAGAGGCAAGTGC

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSDSVTSPKSFQEIILRLQDYWAGKGCAILQPYDMEVGAGTFHPATTLRSLGNRPWAAAYVQPSRRPTDGRYGDSPNRWQ
HYYQFQVIIKPSPPDLQDLYLGSLRAIGIDMDLHDIRFVEDDWESPTLGAWGLGWEVWCDGMEVSQFTYFQQVGGHDCHP
VSGELTYGLERLAMYILGADDGNKMPFNDPDCPIPLTYGDVFQEAEAQYARWNFDVADTDVLLQHFIDAEAECARILAQA
PDDPKTGRRIVMAQPAYDQCIKASHIFNLLDARGVISVTERQAYIGRVRDLAKQCADAFVQTQAGGWTAESAA

Sequences:

>Translated_313_residues
MSDSVTSPKSFQEIILRLQDYWAGKGCAILQPYDMEVGAGTFHPATTLRSLGNRPWAAAYVQPSRRPTDGRYGDSPNRWQ
HYYQFQVIIKPSPPDLQDLYLGSLRAIGIDMDLHDIRFVEDDWESPTLGAWGLGWEVWCDGMEVSQFTYFQQVGGHDCHP
VSGELTYGLERLAMYILGADDGNKMPFNDPDCPIPLTYGDVFQEAEAQYARWNFDVADTDVLLQHFIDAEAECARILAQA
PDDPKTGRRIVMAQPAYDQCIKASHIFNLLDARGVISVTERQAYIGRVRDLAKQCADAFVQTQAGGWTAESAA
>Mature_312_residues
SDSVTSPKSFQEIILRLQDYWAGKGCAILQPYDMEVGAGTFHPATTLRSLGNRPWAAAYVQPSRRPTDGRYGDSPNRWQH
YYQFQVIIKPSPPDLQDLYLGSLRAIGIDMDLHDIRFVEDDWESPTLGAWGLGWEVWCDGMEVSQFTYFQQVGGHDCHPV
SGELTYGLERLAMYILGADDGNKMPFNDPDCPIPLTYGDVFQEAEAQYARWNFDVADTDVLLQHFIDAEAECARILAQAP
DDPKTGRRIVMAQPAYDQCIKASHIFNLLDARGVISVTERQAYIGRVRDLAKQCADAFVQTQAGGWTAESAA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=292, Percent_Identity=60.6164383561644, Blast_Score=361, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 35054; Mature: 34922

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSVTSPKSFQEIILRLQDYWAGKGCAILQPYDMEVGAGTFHPATTLRSLGNRPWAAAY
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEE
VQPSRRPTDGRYGDSPNRWQHYYQFQVIIKPSPPDLQDLYLGSLRAIGIDMDLHDIRFVE
ECCCCCCCCCCCCCCCHHCEEEEEEEEEEECCCCCHHHHHHCCCEEEEECCCHHHEEEEC
DDWESPTLGAWGLGWEVWCDGMEVSQFTYFQQVGGHDCHPVSGELTYGLERLAMYILGAD
CCCCCCCCCCCCCCHHHEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEEECC
DGNKMPFNDPDCPIPLTYGDVFQEAEAQYARWNFDVADTDVLLQHFIDAEAECARILAQA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCC
PDDPKTGRRIVMAQPAYDQCIKASHIFNLLDARGVISVTERQAYIGRVRDLAKQCADAFV
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
QTQAGGWTAESAA
HHCCCCCCCCCCC
>Mature Secondary Structure 
SDSVTSPKSFQEIILRLQDYWAGKGCAILQPYDMEVGAGTFHPATTLRSLGNRPWAAAY
CCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEE
VQPSRRPTDGRYGDSPNRWQHYYQFQVIIKPSPPDLQDLYLGSLRAIGIDMDLHDIRFVE
ECCCCCCCCCCCCCCCHHCEEEEEEEEEEECCCCCHHHHHHCCCEEEEECCCHHHEEEEC
DDWESPTLGAWGLGWEVWCDGMEVSQFTYFQQVGGHDCHPVSGELTYGLERLAMYILGAD
CCCCCCCCCCCCCCHHHEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEEECC
DGNKMPFNDPDCPIPLTYGDVFQEAEAQYARWNFDVADTDVLLQHFIDAEAECARILAQA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCC
PDDPKTGRRIVMAQPAYDQCIKASHIFNLLDARGVISVTERQAYIGRVRDLAKQCADAFV
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
QTQAGGWTAESAA
HHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA