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The map label for this gene is fdx [C]

Identifier: 110679214

GI number: 110679214

Start: 1837155

End: 1837478

Strand: Direct

Name: fdx [C]

Synonym: RD1_1925

Alternate gene names: 110679214

Gene position: 1837155-1837478 (Clockwise)

Preceding gene: 110679212

Following gene: 110679215

Centisome position: 44.45

GC content: 54.94

Gene sequence:

>324_bases
GTGGCCAAAATCACCTATATTGAACACGGCGGAACGGAACATGTTGTCGAGGTCGCAAACGGCCTGACTGTCATGGAAGG
CGCGCGCGACAATAACATTCCCGGTATCGAAGCCGATTGTGGCGGTGCCTGCGCGTGTTCCACTTGCCACGTCTATGTTG
ATCCTGCGTGGGTCGAAAAGCTGCCCGGCAAGGACGATATGGAAGAAGACATGCTTGATTTTGCCTATGAACCTGATCCG
GCGCGCTCGCGGCTGACCTGCCAGCTGAAAGTTACGGATGCTCTGGATGGGCTGATCGTGCAAATGCCGGAAAAACAGAT
CTGA

Upstream 100 bases:

>100_bases
ATCAAAAACAATCCTCTGCGAAGGGGGTCGTAAAACAGGCGCCCGCGCTCTATATGCCGACACAGAACGGATTGAACACG
GCAAGAAGGAATGGATCAAC

Downstream 100 bases:

>100_bases
TGCCTGCGTGGGCGCGGCGTCTTCTGGCGCGCTGCCTGCACCGGTTCACCCGCCGCGCGTTGCCAGTGTTGTGCCTGTTG
CAGGGCGCGGCACAGGCCTC

Product: ferredoxin VI

Products: NA

Alternate protein names: Ferredoxin VI; FdVI [H]

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MAKITYIEHGGTEHVVEVANGLTVMEGARDNNIPGIEADCGGACACSTCHVYVDPAWVEKLPGKDDMEEDMLDFAYEPDP
ARSRLTCQLKVTDALDGLIVQMPEKQI

Sequences:

>Translated_107_residues
MAKITYIEHGGTEHVVEVANGLTVMEGARDNNIPGIEADCGGACACSTCHVYVDPAWVEKLPGKDDMEEDMLDFAYEPDP
ARSRLTCQLKVTDALDGLIVQMPEKQI
>Mature_106_residues
AKITYIEHGGTEHVVEVANGLTVMEGARDNNIPGIEADCGGACACSTCHVYVDPAWVEKLPGKDDMEEDMLDFAYEPDPA
RSRLTCQLKVTDALDGLIVQMPEKQI

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788874, Length=93, Percent_Identity=40.8602150537634, Blast_Score=62, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17544202, Length=106, Percent_Identity=44.3396226415094, Blast_Score=76, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6325004, Length=102, Percent_Identity=45.0980392156863, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11653; Mature: 11522

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKITYIEHGGTEHVVEVANGLTVMEGARDNNIPGIEADCGGACACSTCHVYVDPAWVEK
CCEEEEEECCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEECCEEEEEECHHHHHH
LPGKDDMEEDMLDFAYEPDPARSRLTCQLKVTDALDGLIVQMPEKQI
CCCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCC
>Mature Secondary Structure 
AKITYIEHGGTEHVVEVANGLTVMEGARDNNIPGIEADCGGACACSTCHVYVDPAWVEK
CEEEEEECCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEECCEEEEEECHHHHHH
LPGKDDMEEDMLDFAYEPDPARSRLTCQLKVTDALDGLIVQMPEKQI
CCCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026503; 11173487 [H]